Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is envR [C]
Identifier: 182677324
GI number: 182677324
Start: 369815
End: 370450
Strand: Direct
Name: envR [C]
Synonym: Bind_0327
Alternate gene names: 182677324
Gene position: 369815-370450 (Clockwise)
Preceding gene: 182677322
Following gene: 182677325
Centisome position: 8.87
GC content: 57.7
Gene sequence:
>636_bases ATGCTCCGTTTATTAATATGTGGAGGATTTCTCCGTTTAACAAGGGGACGCCGCTTGGCAGAAGAAAAAACATCGCATCG CCGCCCGCGCCGTGACGGACTCCTCAACCGGGAGAAACTTATCGAGGTTGCGAAATCGGCGTTTCGGGCGGGAGAGGCAG ATATTCGTTTCGACGACATTGCGCGTCGTGCTGGCGTGGGGATCGGCACGCTATATCGCCATTTTCCCAATCGGGATGCG CTGATCGAAGCCGTCTATCGTGCCGAGCTGGACAGACTGGCCCAGGCGGCGAAGAGGCTTGCTGAAACCTATCCGCCGGT CGAGGCCCTGCGCGAATGGATGCTATTGTTTGTGGATTACATCGCCGCCAAACAGCTTATTGCACCCGCACTCAATTCCC TCGTTAGCGATTGTTCGTCTGCCCTCTATGCCGCATCAGGCGAGGTCATCAAGACGGCCATTCATGACTTGGTGGGGCGC GCTGTTCAGAATGGCGACGTACGGTCTGATCTGGAGCCGCTGGATTTGCTGCGCGCGCTGGTGGGTGTCTCGAATGTTGC CGCCGATCCAGGTTGGGAAGCGAGTGCCAAACGGCTCGTCGATATCTTGATCGCAGGGTCCCGGCCAGTGGTCTGA
Upstream 100 bases:
>100_bases GGTCGTGGAAGTCGCGCCGAAAGAATCTGCCATAATGGTCTCCAGCAAGGGAAGAGCGTCGCTGCATTGAACGACTGCAT GAGAGGAGTTATGTGGAAAC
Downstream 100 bases:
>100_bases TTGGCGTCGGATAGGGGTGGCTGCTATGGGCCTATTCTGTTGAAAAAGTCGATATTGCGTGGATGGTAGATCGCTGATTC AATCCAGTTGAAAAGCAAGG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcription Regulator Protein; Tetr Family Transcriptional Regulator; TetR Family Protein Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein Tetr Family; Regulatory Protein; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; TetR-Type Regulator; Transcriptional Regulator TetR
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLRLLICGGFLRLTRGRRLAEEKTSHRRPRRDGLLNREKLIEVAKSAFRAGEADIRFDDIARRAGVGIGTLYRHFPNRDA LIEAVYRAELDRLAQAAKRLAETYPPVEALREWMLLFVDYIAAKQLIAPALNSLVSDCSSALYAASGEVIKTAIHDLVGR AVQNGDVRSDLEPLDLLRALVGVSNVAADPGWEASAKRLVDILIAGSRPVV
Sequences:
>Translated_211_residues MLRLLICGGFLRLTRGRRLAEEKTSHRRPRRDGLLNREKLIEVAKSAFRAGEADIRFDDIARRAGVGIGTLYRHFPNRDA LIEAVYRAELDRLAQAAKRLAETYPPVEALREWMLLFVDYIAAKQLIAPALNSLVSDCSSALYAASGEVIKTAIHDLVGR AVQNGDVRSDLEPLDLLRALVGVSNVAADPGWEASAKRLVDILIAGSRPVV >Mature_211_residues MLRLLICGGFLRLTRGRRLAEEKTSHRRPRRDGLLNREKLIEVAKSAFRAGEADIRFDDIARRAGVGIGTLYRHFPNRDA LIEAVYRAELDRLAQAAKRLAETYPPVEALREWMLLFVDYIAAKQLIAPALNSLVSDCSSALYAASGEVIKTAIHDLVGR AVQNGDVRSDLEPLDLLRALVGVSNVAADPGWEASAKRLVDILIAGSRPVV
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23266; Mature: 23266
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLLICGGFLRLTRGRRLAEEKTSHRRPRRDGLLNREKLIEVAKSAFRAGEADIRFDDI CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH ARRAGVGIGTLYRHFPNRDALIEAVYRAELDRLAQAAKRLAETYPPVEALREWMLLFVDY HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IAAKQLIAPALNSLVSDCSSALYAASGEVIKTAIHDLVGRAVQNGDVRSDLEPLDLLRAL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH VGVSNVAADPGWEASAKRLVDILIAGSRPVV HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLRLLICGGFLRLTRGRRLAEEKTSHRRPRRDGLLNREKLIEVAKSAFRAGEADIRFDDI CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH ARRAGVGIGTLYRHFPNRDALIEAVYRAELDRLAQAAKRLAETYPPVEALREWMLLFVDY HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IAAKQLIAPALNSLVSDCSSALYAASGEVIKTAIHDLVGRAVQNGDVRSDLEPLDLLRAL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH VGVSNVAADPGWEASAKRLVDILIAGSRPVV HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA