| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677146
Identifier: 182677146
GI number: 182677146
Start: 175153
End: 177234
Strand: Direct
Name: 182677146
Synonym: Bind_0145
Alternate gene names: NA
Gene position: 175153-177234 (Clockwise)
Preceding gene: 182677145
Following gene: 182677149
Centisome position: 4.2
GC content: 60.81
Gene sequence:
>2082_bases ATGTTGCTTCGCCGGCATATGATTCCGTTTACGAATTTTTGCTGTTTTCAAGACTTCGAAAAAAATCGCAAATATTCCAA CGCCCTTTCACTCCCCCGTTTCGACGAGAATGTCCAAATGACACCACGTACTGCTCCCTACGGGACCTGGCTTTCGCCGG TTACGACCGATCTTATGACCGAGGCAGCGATCGGGCTTGGGGGGCTCGCCGTCGATGGGACAGATCTGTACTGGCTCGAA ACGCGCCCAAGTGAAGGCGGCCGCACGACGCTTTGCCAGCGCCAGCAGGATGGCACGATCGTCGAACGCACGCCGGCGCC TTTCTATGTTGGCACACGGGTTCATGAATATGGCGGCGGCGCCTATGCGGTCGAAAACCGGACCATCATCTTCAGCGATC GCCGCGACGGATCGGTCTGGATCATCGAGGGCCAGGGGGAGGGAGCGGCGCCGCGCCGTATTCCGACGTCGGAAAATTGT CGCTACGCCGATTTCATCTTCGATCCGAACCATCCGCGCGTGCTCTGTGTCCGCGAGGATCATCGCGACAGGCCGCCGAC CGATCCCAAATCCGCGATCGTCTCCTTGCCGCTCGATGCCTCGGACAAGGAGAGGGTGATCGTCGAGGGGCCGGATTTTC TGAGTTCTCCGCGCCTTTCACCCGATGGCAAGATCCTCGTCTGGTTGTCCTGGGAGCATCCCTTTATGCCCTGGGACTGG ACGCGGCTGCATCTTGCGCCCCTCACGCTCTATGGCTCGATCACGCCGGCTGTGGTGCTCGCCGGCCGCGAGCGTGAATC CATCGTGCAGCCGGGTTTTGCACCTGATGGCACGCTCCATTTCTGTTCCGATCGCACCGGCTGGTGGAATCTTTATGCCT TGCGAGGCGATAAAATCGTGCCCGTGGCGCCGGTCGACGCAGAGATCGGCGGGCCGCATTGGGTCTTCGCCCAGCATTAT TATGCCTTTTTGCCAGACAAGCGCCTCGTCGCCTCCATCGTGCGGGACGGTATCAGGACGGCTTGCGTGATTGATGGAGA CGTGATTACGCCGCTGTCGCTCGGCCAGGGCCAAGCGGGGCAGGTGGCGGATTGTCCGCAACCGATCGGTCAAGGCCTCG CCTTTCTCGCGACGCCGCCGACGGCGCCGCCCGCCTTGAGCCTTGTCGATAAGCCCGAGGCCACAAAGATTCAAATTGTG CGGGTCGCGGCTCCCGCCGTGATCCCTGAGGAGACGATCTCAATCGGGGAACCGATCGATTATCCGAGCCGAGGCACGAT TGCGCATGCCTTCTGGTATGCGCCGAAAAACGCCGATTATCAGGCTCCTGACGGCACATTGCCGCCGCTCGTCGTGCTCT CGCATGGCGGTCCGACGAGCATGACGACCAATCATTTCACGCTCTCGGTGCAATGGTGGACGAGCAGGGGTTTCGGCGTC GTCGATGTCAATTATGGCGGCTCGACCGGCTACGGCCGCGATTATCGCCGGGCGCTCGATGGGCAATGGGGCCTTGTCGA TGTCGAGGATTGCCAGGCGGCGGCGCTTTATCTCGTGGAAAAGGGCCTGGTTGATCCCAACCGCATCGCCATCCGGGGCG GCAGTGCCGGCGGCTTCACCACTTTGGCGGCGCTCACGACGACACAGACGTTCAAGGCCGGCGCCAGTCTCTACGGCGTC GCCGATCTCATGCTGCTTGCGCGTGATACACATAAATTCGAATCGCGCTATCTCGATGGCCTCATCGGCCCCTTGCCGCA GGCGAAAGCGCTCTATGCCGAGCGCTCACCGATCAATCACATCGATCGGCTCACCTGTCCCGTGATCTTCTTTCAAGGCG AGGACGACAAGACCGTGCCGCCGAACCAGGCGGAAACCATGGTCGCGGCGCTCGAGGCCCGGCATCTTCCGGTCTCCTAT TATCTCTTTGCCGGTGAAGGTCATGGCTTTCGCAAAGCCGAAACCATCCGCCGCGTGCTCGACCTCGAACTCGGCTTTTA CGGCCGTGTCTTTGGCTTCGAGCCGCCCAATTTAAGCGAGCGCGTGGTCATATCTCTCATCGGGGACGATCATGAAGGAT GA
Upstream 100 bases:
>100_bases ATGACGTCAACCAGACGGTTCAAGCCGAAGTCCCAGGGGAAGCACCTGCCGGGGCTTCGGCTTTTTGTTCGAAAACGGGC TTTTTCTGCTTTAACCATGA
Downstream 100 bases:
>100_bases GTCTCGATGGGCTCTTTCTTCTCCCAAAGCGTAATCCCGGATGGATCGGCGGCTGCGGCAGCTTCGCCGATTCCGCGCCC GCGCAAGCAAAGATCCGGCG
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: AARE; Acyl-peptide hydrolase; APH; Acylaminoacyl-peptidase [H]
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MLLRRHMIPFTNFCCFQDFEKNRKYSNALSLPRFDENVQMTPRTAPYGTWLSPVTTDLMTEAAIGLGGLAVDGTDLYWLE TRPSEGGRTTLCQRQQDGTIVERTPAPFYVGTRVHEYGGGAYAVENRTIIFSDRRDGSVWIIEGQGEGAAPRRIPTSENC RYADFIFDPNHPRVLCVREDHRDRPPTDPKSAIVSLPLDASDKERVIVEGPDFLSSPRLSPDGKILVWLSWEHPFMPWDW TRLHLAPLTLYGSITPAVVLAGRERESIVQPGFAPDGTLHFCSDRTGWWNLYALRGDKIVPVAPVDAEIGGPHWVFAQHY YAFLPDKRLVASIVRDGIRTACVIDGDVITPLSLGQGQAGQVADCPQPIGQGLAFLATPPTAPPALSLVDKPEATKIQIV RVAAPAVIPEETISIGEPIDYPSRGTIAHAFWYAPKNADYQAPDGTLPPLVVLSHGGPTSMTTNHFTLSVQWWTSRGFGV VDVNYGGSTGYGRDYRRALDGQWGLVDVEDCQAAALYLVEKGLVDPNRIAIRGGSAGGFTTLAALTTTQTFKAGASLYGV ADLMLLARDTHKFESRYLDGLIGPLPQAKALYAERSPINHIDRLTCPVIFFQGEDDKTVPPNQAETMVAALEARHLPVSY YLFAGEGHGFRKAETIRRVLDLELGFYGRVFGFEPPNLSERVVISLIGDDHEG
Sequences:
>Translated_693_residues MLLRRHMIPFTNFCCFQDFEKNRKYSNALSLPRFDENVQMTPRTAPYGTWLSPVTTDLMTEAAIGLGGLAVDGTDLYWLE TRPSEGGRTTLCQRQQDGTIVERTPAPFYVGTRVHEYGGGAYAVENRTIIFSDRRDGSVWIIEGQGEGAAPRRIPTSENC RYADFIFDPNHPRVLCVREDHRDRPPTDPKSAIVSLPLDASDKERVIVEGPDFLSSPRLSPDGKILVWLSWEHPFMPWDW TRLHLAPLTLYGSITPAVVLAGRERESIVQPGFAPDGTLHFCSDRTGWWNLYALRGDKIVPVAPVDAEIGGPHWVFAQHY YAFLPDKRLVASIVRDGIRTACVIDGDVITPLSLGQGQAGQVADCPQPIGQGLAFLATPPTAPPALSLVDKPEATKIQIV RVAAPAVIPEETISIGEPIDYPSRGTIAHAFWYAPKNADYQAPDGTLPPLVVLSHGGPTSMTTNHFTLSVQWWTSRGFGV VDVNYGGSTGYGRDYRRALDGQWGLVDVEDCQAAALYLVEKGLVDPNRIAIRGGSAGGFTTLAALTTTQTFKAGASLYGV ADLMLLARDTHKFESRYLDGLIGPLPQAKALYAERSPINHIDRLTCPVIFFQGEDDKTVPPNQAETMVAALEARHLPVSY YLFAGEGHGFRKAETIRRVLDLELGFYGRVFGFEPPNLSERVVISLIGDDHEG >Mature_693_residues MLLRRHMIPFTNFCCFQDFEKNRKYSNALSLPRFDENVQMTPRTAPYGTWLSPVTTDLMTEAAIGLGGLAVDGTDLYWLE TRPSEGGRTTLCQRQQDGTIVERTPAPFYVGTRVHEYGGGAYAVENRTIIFSDRRDGSVWIIEGQGEGAAPRRIPTSENC RYADFIFDPNHPRVLCVREDHRDRPPTDPKSAIVSLPLDASDKERVIVEGPDFLSSPRLSPDGKILVWLSWEHPFMPWDW TRLHLAPLTLYGSITPAVVLAGRERESIVQPGFAPDGTLHFCSDRTGWWNLYALRGDKIVPVAPVDAEIGGPHWVFAQHY YAFLPDKRLVASIVRDGIRTACVIDGDVITPLSLGQGQAGQVADCPQPIGQGLAFLATPPTAPPALSLVDKPEATKIQIV RVAAPAVIPEETISIGEPIDYPSRGTIAHAFWYAPKNADYQAPDGTLPPLVVLSHGGPTSMTTNHFTLSVQWWTSRGFGV VDVNYGGSTGYGRDYRRALDGQWGLVDVEDCQAAALYLVEKGLVDPNRIAIRGGSAGGFTTLAALTTTQTFKAGASLYGV ADLMLLARDTHKFESRYLDGLIGPLPQAKALYAERSPINHIDRLTCPVIFFQGEDDKTVPPNQAETMVAALEARHLPVSY YLFAGEGHGFRKAETIRRVLDLELGFYGRVFGFEPPNLSERVVISLIGDDHEG
Specific function: This enzyme catalyzes the hydrolysis of the N-terminal peptide bond of an N-acetylated peptide to generate an N- acetylated amino acid and a peptide with a free N-terminus [H]
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9C family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=225, Percent_Identity=30.6666666666667, Blast_Score=99, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17552908, Length=647, Percent_Identity=32.6120556414219, Blast_Score=300, Evalue=2e-81, Organism=Caenorhabditis elegans, GI25144540, Length=281, Percent_Identity=33.0960854092527, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI25144537, Length=281, Percent_Identity=33.0960854092527, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI25144543, Length=148, Percent_Identity=36.4864864864865, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI25149159, Length=216, Percent_Identity=28.2407407407407, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR001375 - InterPro: IPR004106 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: =3.4.19.1 [H]
Molecular weight: Translated: 76241; Mature: 76241
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRRHMIPFTNFCCFQDFEKNRKYSNALSLPRFDENVQMTPRTAPYGTWLSPVTTDLMT CCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHH EAAIGLGGLAVDGTDLYWLETRPSEGGRTTLCQRQQDGTIVERTPAPFYVGTRVHEYGGG HHHHCCCCEEECCCEEEEEECCCCCCCCCEEECCCCCCCEEEECCCCEEECCEEEECCCC AYAVENRTIIFSDRRDGSVWIIEGQGEGAAPRRIPTSENCRYADFIFDPNHPRVLCVRED EEEEECEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCC HRDRPPTDPKSAIVSLPLDASDKERVIVEGPDFLSSPRLSPDGKILVWLSWEHPFMPWDW CCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCC TRLHLAPLTLYGSITPAVVLAGRERESIVQPGFAPDGTLHFCSDRTGWWNLYALRGDKIV EEEEEEEEEEECCCCCEEEEECCCHHHHCCCCCCCCCCEEEECCCCCEEEEEEEECCEEE PVAPVDAEIGGPHWVFAQHYYAFLPDKRLVASIVRDGIRTACVIDGDVITPLSLGQGQAG EECCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHCCCCEEEEECCCEECCEECCCCCCC QVADCPQPIGQGLAFLATPPTAPPALSLVDKPEATKIQIVRVAAPAVIPEETISIGEPID CCCCCCHHHHCCEEEEECCCCCCCCEEECCCCCCCEEEEEEEECCCCCCHHHHCCCCCCC YPSRGTIAHAFWYAPKNADYQAPDGTLPPLVVLSHGGPTSMTTNHFTLSVQWWTSRGFGV CCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEECEEEEEEEEECCCCCEE VDVNYGGSTGYGRDYRRALDGQWGLVDVEDCQAAALYLVEKGLVDPNRIAIRGGSAGGFT EEEECCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCE TLAALTTTQTFKAGASLYGVADLMLLARDTHKFESRYLDGLIGPLPQAKALYAERSPINH EEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCH IDRLTCPVIFFQGEDDKTVPPNQAETMVAALEARHLPVSYYLFAGEGHGFRKAETIRRVL HHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHH DLELGFYGRVFGFEPPNLSERVVISLIGDDHEG HHCCCCEEEEECCCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MLLRRHMIPFTNFCCFQDFEKNRKYSNALSLPRFDENVQMTPRTAPYGTWLSPVTTDLMT CCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHH EAAIGLGGLAVDGTDLYWLETRPSEGGRTTLCQRQQDGTIVERTPAPFYVGTRVHEYGGG HHHHCCCCEEECCCEEEEEECCCCCCCCCEEECCCCCCCEEEECCCCEEECCEEEECCCC AYAVENRTIIFSDRRDGSVWIIEGQGEGAAPRRIPTSENCRYADFIFDPNHPRVLCVRED EEEEECEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCC HRDRPPTDPKSAIVSLPLDASDKERVIVEGPDFLSSPRLSPDGKILVWLSWEHPFMPWDW CCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCC TRLHLAPLTLYGSITPAVVLAGRERESIVQPGFAPDGTLHFCSDRTGWWNLYALRGDKIV EEEEEEEEEEECCCCCEEEEECCCHHHHCCCCCCCCCCEEEECCCCCEEEEEEEECCEEE PVAPVDAEIGGPHWVFAQHYYAFLPDKRLVASIVRDGIRTACVIDGDVITPLSLGQGQAG EECCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHCCCCEEEEECCCEECCEECCCCCCC QVADCPQPIGQGLAFLATPPTAPPALSLVDKPEATKIQIVRVAAPAVIPEETISIGEPID CCCCCCHHHHCCEEEEECCCCCCCCEEECCCCCCCEEEEEEEECCCCCCHHHHCCCCCCC YPSRGTIAHAFWYAPKNADYQAPDGTLPPLVVLSHGGPTSMTTNHFTLSVQWWTSRGFGV CCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEECEEEEEEEEECCCCCEE VDVNYGGSTGYGRDYRRALDGQWGLVDVEDCQAAALYLVEKGLVDPNRIAIRGGSAGGFT EEEECCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCE TLAALTTTQTFKAGASLYGVADLMLLARDTHKFESRYLDGLIGPLPQAKALYAERSPINH EEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCH IDRLTCPVIFFQGEDDKTVPPNQAETMVAALEARHLPVSYYLFAGEGHGFRKAETIRRVL HHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHH DLELGFYGRVFGFEPPNLSERVVISLIGDDHEG HHCCCCEEEEECCCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10382966; 12037315 [H]