Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
---|---|
Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is dnaJ
Identifier: 182677130
GI number: 182677130
Start: 152599
End: 153717
Strand: Direct
Name: dnaJ
Synonym: Bind_0129
Alternate gene names: 182677130
Gene position: 152599-153717 (Clockwise)
Preceding gene: 182677129
Following gene: 182677131
Centisome position: 3.66
GC content: 60.5
Gene sequence:
>1119_bases ATGGCCAAACGCGATTTCTACGAGGTGCTGGGCGTAACCAAGACCTGTACGGAAGCCGAGATGAAAGTGGCTTTCCGTAA GGCGGCCATGCAATGGCATCCCGACCGCAATCCCGGCAATGAGGAAGCCGAGATCCAGTTCAAGGAAATCAACGAAGCCT ATCAAACGCTCTCCGACGGGCAGAAGCGCGCCGCCTATGATCGTTATGGCCATGCTGCTTTCGAGCATGGTGGTGGTGGC AATGACGGTTTTGCCTCCTCGATGGCGGATATTTTCGACGATCTGTTCGGCGACGTGATGGGCCGGCGCGGTGGCCGCAA CGGACCAGCCCGCGGCTCGGATCTTCGCTACAATATGGAAATCACTTTGGAAGAGGCGTTCCAGGGCAAGCTCGCGAGCC TGACCCTGCCGACCTCCATCACTTGCGAGGCTTGTGATGGCACCGGCGCCAAGGCGGGCGCCAAGCCACGCATCTGTCCG ACATGCGGTGGCCAGGGCCGTGTCCGCGCGCAACAAGGCTTTTTTGCGATCGAACGCACCTGTCCGCAATGCCATGGCCG TGGCGAGATCATTGACGATCCGTGCCAGGCTTGCGGCGGCGCGGGCCGCGTCACGCGCGAACGGACGCTTTCGGTCAATA TCCCGCCGGGTGTCGAGGATGGCACGCGGATCAGGCTCGCCGGAGAGGGCGAGGCGGGAACCCGTGGCGGGCCAGCCGGC GATCTTTATATTTTCGTCTCGACCAAGCCGCATCCCTTCTTCCAGCGCGATGGGGCTGATCTTTTCTGCCGTGTGCCGAT TTCCATGACCCAGGCTGCGCTGGGTGGTGAAGTTACGGTCCATACGATCGATGGCAAAGAGGCCAAGGTCAAGATTTCGG AAGGCACACAATCGGGCAAGCAGTTCAAGCTCAAGAACAAGGGCATGCCTGTGCTGCGCTCGCGCGAGGTCGGAGATCTC TACATTCAGGCGACGGTCGAAACGCCGCAGAATCTGACCAAGCGGCAGCGCGAGCTTCTGGCCGAGTTCGACGCGGAATC CTCCAACAAGACGCATCCCGAGGCGTCCGGTTTCTTCGCTCGGATGAAGGATTTCTTCGAAAACCTCAGCGGCCAATAG
Upstream 100 bases:
>100_bases TAAGGGCTGGAAACCCGGGCGCGGCAATGTCGACCCGGCCCTTTCGAAGATCGAGGCAAAGCGCCCCACGCGGGCCTGAG GATTTGGAACGCGAACGACG
Downstream 100 bases:
>100_bases GATTGCAACCCGGCCGATGGAGAGAGGCCCAAAAAATTGGGATCTTCATAATTCTGTTGAAATCCATCGGGCGCCCCCGT TAAGTGGGGACAGCAAGCTT
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MAKRDFYEVLGVTKTCTEAEMKVAFRKAAMQWHPDRNPGNEEAEIQFKEINEAYQTLSDGQKRAAYDRYGHAAFEHGGGG NDGFASSMADIFDDLFGDVMGRRGGRNGPARGSDLRYNMEITLEEAFQGKLASLTLPTSITCEACDGTGAKAGAKPRICP TCGGQGRVRAQQGFFAIERTCPQCHGRGEIIDDPCQACGGAGRVTRERTLSVNIPPGVEDGTRIRLAGEGEAGTRGGPAG DLYIFVSTKPHPFFQRDGADLFCRVPISMTQAALGGEVTVHTIDGKEAKVKISEGTQSGKQFKLKNKGMPVLRSREVGDL YIQATVETPQNLTKRQRELLAEFDAESSNKTHPEASGFFARMKDFFENLSGQ
Sequences:
>Translated_372_residues MAKRDFYEVLGVTKTCTEAEMKVAFRKAAMQWHPDRNPGNEEAEIQFKEINEAYQTLSDGQKRAAYDRYGHAAFEHGGGG NDGFASSMADIFDDLFGDVMGRRGGRNGPARGSDLRYNMEITLEEAFQGKLASLTLPTSITCEACDGTGAKAGAKPRICP TCGGQGRVRAQQGFFAIERTCPQCHGRGEIIDDPCQACGGAGRVTRERTLSVNIPPGVEDGTRIRLAGEGEAGTRGGPAG DLYIFVSTKPHPFFQRDGADLFCRVPISMTQAALGGEVTVHTIDGKEAKVKISEGTQSGKQFKLKNKGMPVLRSREVGDL YIQATVETPQNLTKRQRELLAEFDAESSNKTHPEASGFFARMKDFFENLSGQ >Mature_371_residues AKRDFYEVLGVTKTCTEAEMKVAFRKAAMQWHPDRNPGNEEAEIQFKEINEAYQTLSDGQKRAAYDRYGHAAFEHGGGGN DGFASSMADIFDDLFGDVMGRRGGRNGPARGSDLRYNMEITLEEAFQGKLASLTLPTSITCEACDGTGAKAGAKPRICPT CGGQGRVRAQQGFFAIERTCPQCHGRGEIIDDPCQACGGAGRVTRERTLSVNIPPGVEDGTRIRLAGEGEAGTRGGPAGD LYIFVSTKPHPFFQRDGADLFCRVPISMTQAALGGEVTVHTIDGKEAKVKISEGTQSGKQFKLKNKGMPVLRSREVGDLY IQATVETPQNLTKRQRELLAEFDAESSNKTHPEASGFFARMKDFFENLSGQ
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain
Homologues:
Organism=Homo sapiens, GI205360838, Length=357, Percent_Identity=33.0532212885154, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI205360840, Length=357, Percent_Identity=33.0532212885154, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI194328760, Length=337, Percent_Identity=35.3115727002967, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI194328758, Length=337, Percent_Identity=35.3115727002967, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI4504511, Length=337, Percent_Identity=35.9050445103858, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI5031741, Length=346, Percent_Identity=35.2601156069364, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI7706495, Length=356, Percent_Identity=33.1460674157303, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI194328762, Length=306, Percent_Identity=34.3137254901961, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI5453690, Length=364, Percent_Identity=26.6483516483516, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI6631085, Length=368, Percent_Identity=26.3586956521739, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI39204547, Length=347, Percent_Identity=25.6484149855908, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI9558755, Length=102, Percent_Identity=45.0980392156863, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI47777312, Length=103, Percent_Identity=45.6310679611651, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI23503241, Length=103, Percent_Identity=43.6893203883495, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI27151736, Length=133, Percent_Identity=36.0902255639098, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI88501736, Length=133, Percent_Identity=36.0902255639098, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI21553335, Length=105, Percent_Identity=41.9047619047619, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=54.5454545454545, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=54.5454545454545, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI24308127, Length=77, Percent_Identity=45.4545454545455, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI45504382, Length=65, Percent_Identity=49.2307692307692, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI56549115, Length=67, Percent_Identity=49.2537313432836, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI201862518, Length=67, Percent_Identity=49.2537313432836, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI194306642, Length=104, Percent_Identity=39.4230769230769, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI194306640, Length=104, Percent_Identity=39.4230769230769, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI201862587, Length=67, Percent_Identity=49.2537313432836, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI68077166, Length=78, Percent_Identity=50, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI68077168, Length=78, Percent_Identity=50, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI56687498, Length=76, Percent_Identity=46.0526315789474, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI29126218, Length=65, Percent_Identity=46.1538461538462, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI72534740, Length=104, Percent_Identity=41.3461538461538, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1786197, Length=376, Percent_Identity=52.6595744680851, Blast_Score=397, Evalue=1e-112, Organism=Escherichia coli, GI1787235, Length=362, Percent_Identity=31.2154696132597, Blast_Score=152, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17553096, Length=367, Percent_Identity=31.6076294277929, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17553098, Length=367, Percent_Identity=31.6076294277929, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17507263, Length=383, Percent_Identity=31.331592689295, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI212645553, Length=349, Percent_Identity=30.6590257879656, Blast_Score=134, Evalue=8e-32, Organism=Caenorhabditis elegans, GI17563890, Length=227, Percent_Identity=29.5154185022026, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17534355, Length=135, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17554644, Length=70, Percent_Identity=48.5714285714286, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI86563276, Length=104, Percent_Identity=37.5, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115532378, Length=93, Percent_Identity=36.5591397849462, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6324265, Length=336, Percent_Identity=37.202380952381, Blast_Score=204, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6323119, Length=382, Percent_Identity=28.7958115183246, Blast_Score=143, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6323870, Length=360, Percent_Identity=31.1111111111111, Blast_Score=137, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6321094, Length=388, Percent_Identity=29.639175257732, Blast_Score=129, Evalue=8e-31, Organism=Saccharomyces cerevisiae, GI6324252, Length=348, Percent_Identity=28.1609195402299, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322194, Length=93, Percent_Identity=40.8602150537634, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324321, Length=68, Percent_Identity=47.0588235294118, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324103, Length=86, Percent_Identity=40.6976744186046, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323813, Length=68, Percent_Identity=45.5882352941176, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320888, Length=66, Percent_Identity=40.9090909090909, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI24646562, Length=342, Percent_Identity=34.2105263157895, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24646560, Length=342, Percent_Identity=34.2105263157895, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24646558, Length=342, Percent_Identity=34.2105263157895, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24646556, Length=342, Percent_Identity=34.2105263157895, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI21357547, Length=342, Percent_Identity=34.2105263157895, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI20129487, Length=342, Percent_Identity=33.3333333333333, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI24584014, Length=342, Percent_Identity=33.3333333333333, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI45552813, Length=382, Percent_Identity=28.0104712041885, Blast_Score=158, Evalue=7e-39, Organism=Drosophila melanogaster, GI45549272, Length=382, Percent_Identity=28.0104712041885, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI45552811, Length=382, Percent_Identity=28.0104712041885, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI19920464, Length=354, Percent_Identity=30.5084745762712, Blast_Score=144, Evalue=8e-35, Organism=Drosophila melanogaster, GI85726398, Length=358, Percent_Identity=26.8156424581006, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI28574949, Length=352, Percent_Identity=26.4204545454545, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI18858081, Length=347, Percent_Identity=27.9538904899135, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI24654066, Length=67, Percent_Identity=50.7462686567164, Blast_Score=85, Evalue=8e-17, Organism=Drosophila melanogaster, GI24654070, Length=67, Percent_Identity=50.7462686567164, Blast_Score=85, Evalue=8e-17, Organism=Drosophila melanogaster, GI24654068, Length=67, Percent_Identity=50.7462686567164, Blast_Score=85, Evalue=8e-17, Organism=Drosophila melanogaster, GI24654072, Length=67, Percent_Identity=50.7462686567164, Blast_Score=85, Evalue=8e-17, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=50, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI17737735, Length=65, Percent_Identity=49.2307692307692, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24668523, Length=65, Percent_Identity=49.2307692307692, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI28574723, Length=65, Percent_Identity=49.2307692307692, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24658562, Length=67, Percent_Identity=47.7611940298507, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24658555, Length=67, Percent_Identity=47.7611940298507, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI21358273, Length=69, Percent_Identity=50.7246376811594, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24762799, Length=88, Percent_Identity=36.3636363636364, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI21355073, Length=62, Percent_Identity=45.1612903225806, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24643180, Length=65, Percent_Identity=46.1538461538462, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24584630, Length=70, Percent_Identity=40, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI17648033, Length=70, Percent_Identity=40, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DNAJ_BEII9 (B2IBR5)
Other databases:
- EMBL: CP001016 - RefSeq: YP_001831276.1 - ProteinModelPortal: B2IBR5 - GeneID: 6201448 - GenomeReviews: CP001016_GR - KEGG: bid:Bind_0129 - HOGENOM: HBG635315 - OMA: LVNCKPC - ProtClustDB: CLSK2405137 - GO: GO:0005737 - HAMAP: MF_01152 - InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 - Gene3D: G3DSA:1.10.287.110 - Gene3D: G3DSA:2.10.230.10 - PANTHER: PTHR11821 - PRINTS: PR00625 - SMART: SM00271 - TIGRFAMs: TIGR02349
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG; SSF46565 DnaJ_N; SSF49493 HSP40_DnaJ_pep; SSF57938 HSP_DnaJ_cys-rich
EC number: NA
Molecular weight: Translated: 40436; Mature: 40305
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00636 DNAJ_1; PS50076 DNAJ_2; PS51188 ZF_CR; PS00637 DNAJ_CXXCXGXG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRDFYEVLGVTKTCTEAEMKVAFRKAAMQWHPDRNPGNEEAEIQFKEINEAYQTLSDG CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCC QKRAAYDRYGHAAFEHGGGGNDGFASSMADIFDDLFGDVMGRRGGRNGPARGSDLRYNME HHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE ITLEEAFQGKLASLTLPTSITCEACDGTGAKAGAKPRICPTCGGQGRVRAQQGFFAIERT EEEEHHHCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECC CPQCHGRGEIIDDPCQACGGAGRVTRERTLSVNIPPGVEDGTRIRLAGEGEAGTRGGPAG CHHHCCCCCCCCCHHHHCCCCCCCEECEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCC DLYIFVSTKPHPFFQRDGADLFCRVPISMTQAALGGEVTVHTIDGKEAKVKISEGTQSGK EEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCC QFKLKNKGMPVLRSREVGDLYIQATVETPQNLTKRQRELLAEFDAESSNKTHPEASGFFA EEEECCCCCCEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RMKDFFENLSGQ HHHHHHHHHCCC >Mature Secondary Structure AKRDFYEVLGVTKTCTEAEMKVAFRKAAMQWHPDRNPGNEEAEIQFKEINEAYQTLSDG CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCC QKRAAYDRYGHAAFEHGGGGNDGFASSMADIFDDLFGDVMGRRGGRNGPARGSDLRYNME HHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE ITLEEAFQGKLASLTLPTSITCEACDGTGAKAGAKPRICPTCGGQGRVRAQQGFFAIERT EEEEHHHCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECC CPQCHGRGEIIDDPCQACGGAGRVTRERTLSVNIPPGVEDGTRIRLAGEGEAGTRGGPAG CHHHCCCCCCCCCHHHHCCCCCCCEECEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCC DLYIFVSTKPHPFFQRDGADLFCRVPISMTQAALGGEVTVHTIDGKEAKVKISEGTQSGK EEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCC QFKLKNKGMPVLRSREVGDLYIQATVETPQNLTKRQRELLAEFDAESSNKTHPEASGFFA EEEECCCCCCEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RMKDFFENLSGQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA