Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
---|---|
Accession | NC_010581 |
Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182677092
Identifier: 182677092
GI number: 182677092
Start: 103285
End: 104181
Strand: Direct
Name: 182677092
Synonym: Bind_0090
Alternate gene names: NA
Gene position: 103285-104181 (Clockwise)
Preceding gene: 182677091
Following gene: 182677095
Centisome position: 2.48
GC content: 59.31
Gene sequence:
>897_bases ATGAGGATCTTCGTCACGGGCGCAAGTGGCTATATTGGCGGTTCAGTCGCGGCCGCGCTCGCGCAAAAAGGGCATGTGGT ACGGGGCCTTGTGCGCAATCCCGCCAAAGCCGAGGCCGTTAGCGCCAAAGGCATTACACCGGTCATCTTTACGCTCGACG ATGCCGATCTGTTGCGCACCGAGGCCAGTGCCGCTGATGCCGTCATCAATTGCGCCGATAGCGATCATCAAGGCGCGGTC GAGGCGCTGCTCGCGGGTCTTTCGGGCTCCGGCAAGGTTTTTATCCATACGAGCGGGACGAGCCTCGTCGGCGACGAGGC CATGGGTGAGCCCTCCGATAAAATTTTTATCGAGGAAACGCCGGTCAAACCCGAGCCCGACAAGGTGCATCGCGTCGCCT TGAATAAATTGATTCTCGAGGCGGCACCCGGCGTGCGGACGATCGTGCTCTGCAACAGCCTCATCTATGGTCATACATTG GGCGTGCCTGCGCAGAGCGTGCAGATTCCACCTTTGGTCGCGCAGGCAAAGGAGAGCGGCATTCCGCGTTATATCGGTCG TGGTCTCAATATCTGGTCAAATGTCCATATTGCCGATTTGGTCGATCTTTATGCGTTGGCGCTCGAAAAGGCGCCGGCTG GCCGTTTCTATTATGTCGAAAATGGTGAAGCCACCTTCGGCGATCTTGTGCGCGTGATTGGCAAGACATTGGGGCTTGGT GTGGCGCAAAGCTGGTCGGCGGAAGAAGCGATCGCGAAATGGGGACGCGAACTCGCTGTCTTTGCGCTCGGATCGAACAG CCGGGTGCGTGCCGGCAAGGCGCGCGCGGAATTGGGCTGGGCGCCGAGGCATGATTCAGTCCTCGACTGGGTGGCGACCA GTCTGAATGGTGGCTGA
Upstream 100 bases:
>100_bases AAGGTCTTCCCCTCGCTCTGGCCGACCGCTCGCTTCATTATGGGGGCGGCGCGCATGGCTATACCGATTATTCCGTTTAT CACGGCGAAGGGGTCAGGCT
Downstream 100 bases:
>100_bases TCCCACCGTTGGTTCAATCGTGCCTTTGTTTTAAATGCCGGTCGATCAAAAGATTAGCCAGCGCCATGCGCCGCGTGGCG AGGGCGCGTTCCATCGGCGG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Oxidoreductase; NAD Dependent Epimerase/Dehydratase; NAD Dependent Epimerase/Dehydratase Family Protein; Epimerase/Dehydratase; Nucleoside-Diphosphate-Sugar Epimerase; Polysaccharide Synthesis Protein; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; UDP-Glucose 4-Epimerase; Dyhydroflavanol-4-Reductase; NAD-Dependent Epimerase/Dehydratase Family Protein; Dehydratase; Nucleoside-Diphosphate-Sugar Epimerases; Signal Peptide; Hopanoid-Associated Sugar Epimerase; Dihydrokaempferol 4-Reductase; NAD Dependent Epimerase/Dehydratase Family; Male Sterility Protein-Like Protein; 3-Beta Hydroxysteroid Dehydrogenase
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MRIFVTGASGYIGGSVAAALAQKGHVVRGLVRNPAKAEAVSAKGITPVIFTLDDADLLRTEASAADAVINCADSDHQGAV EALLAGLSGSGKVFIHTSGTSLVGDEAMGEPSDKIFIEETPVKPEPDKVHRVALNKLILEAAPGVRTIVLCNSLIYGHTL GVPAQSVQIPPLVAQAKESGIPRYIGRGLNIWSNVHIADLVDLYALALEKAPAGRFYYVENGEATFGDLVRVIGKTLGLG VAQSWSAEEAIAKWGRELAVFALGSNSRVRAGKARAELGWAPRHDSVLDWVATSLNGG
Sequences:
>Translated_298_residues MRIFVTGASGYIGGSVAAALAQKGHVVRGLVRNPAKAEAVSAKGITPVIFTLDDADLLRTEASAADAVINCADSDHQGAV EALLAGLSGSGKVFIHTSGTSLVGDEAMGEPSDKIFIEETPVKPEPDKVHRVALNKLILEAAPGVRTIVLCNSLIYGHTL GVPAQSVQIPPLVAQAKESGIPRYIGRGLNIWSNVHIADLVDLYALALEKAPAGRFYYVENGEATFGDLVRVIGKTLGLG VAQSWSAEEAIAKWGRELAVFALGSNSRVRAGKARAELGWAPRHDSVLDWVATSLNGG >Mature_298_residues MRIFVTGASGYIGGSVAAALAQKGHVVRGLVRNPAKAEAVSAKGITPVIFTLDDADLLRTEASAADAVINCADSDHQGAV EALLAGLSGSGKVFIHTSGTSLVGDEAMGEPSDKIFIEETPVKPEPDKVHRVALNKLILEAAPGVRTIVLCNSLIYGHTL GVPAQSVQIPPLVAQAKESGIPRYIGRGLNIWSNVHIADLVDLYALALEKAPAGRFYYVENGEATFGDLVRVIGKTLGLG VAQSWSAEEAIAKWGRELAVFALGSNSRVRAGKARAELGWAPRHDSVLDWVATSLNGG
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322972, Length=310, Percent_Identity=31.6129032258064, Blast_Score=107, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31220; Mature: 31220
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFVTGASGYIGGSVAAALAQKGHVVRGLVRNPAKAEAVSAKGITPVIFTLDDADLLRT CEEEEECCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCEEEEEECCHHHHHH EASAADAVINCADSDHQGAVEALLAGLSGSGKVFIHTSGTSLVGDEAMGEPSDKIFIEET HHHHHHHEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECCHHCCCCCCEEEEECC PVKPEPDKVHRVALNKLILEAAPGVRTIVLCNSLIYGHTLGVPAQSVQIPPLVAQAKESG CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCEECCHHHHHHHHCC IPRYIGRGLNIWSNVHIADLVDLYALALEKAPAGRFYYVENGEATFGDLVRVIGKTLGLG CCHHHHCCCCHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC VAQSWSAEEAIAKWGRELAVFALGSNSRVRAGKARAELGWAPRHDSVLDWVATSLNGG CCCCCCHHHHHHHCCCEEEEEEECCCCCEECCCCHHHCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MRIFVTGASGYIGGSVAAALAQKGHVVRGLVRNPAKAEAVSAKGITPVIFTLDDADLLRT CEEEEECCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCEEEEEECCHHHHHH EASAADAVINCADSDHQGAVEALLAGLSGSGKVFIHTSGTSLVGDEAMGEPSDKIFIEET HHHHHHHEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECCHHCCCCCCEEEEECC PVKPEPDKVHRVALNKLILEAAPGVRTIVLCNSLIYGHTLGVPAQSVQIPPLVAQAKESG CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCEECCHHHHHHHHCC IPRYIGRGLNIWSNVHIADLVDLYALALEKAPAGRFYYVENGEATFGDLVRVIGKTLGLG CCHHHHCCCCHHCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC VAQSWSAEEAIAKWGRELAVFALGSNSRVRAGKARAELGWAPRHDSVLDWVATSLNGG CCCCCCHHHHHHHCCCEEEEEEECCCCCEECCCCHHHCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA