Definition | Opitutus terrae PB90-1 chromosome, complete genome. |
---|---|
Accession | NC_010571 |
Length | 5,957,605 |
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Identifier: 182416055
GI number:
Start: 5485258
End: 5490804
Strand: Reverse
Name: Not Available
Synonym: Oter_4248
Alternate gene names: NA
Gene position: NA
Preceding gene: 182416058
Following gene: 182416054
Centisome position: NA
GC content: NA
Gene sequence:
>5547_bases ATGAAAAACCAGCTGTCGCCCCTCGGATCGGTGCTCCGTCTCTTCGTGGTTTGTTTGGTTCTGGCCGGCCCAAGCGCGTG GGCGGCGAAGGTCACCTCGATCGCGCGGCAGGATCCCGGTCCGGCGATCACCGCAACGAGCGCGACGTTTCGCGTCACCT TCGACGAGGACGTCACCGGCGTGACGACCGGCGCGTTTACCCTCGGCACCACCGGCACCGCGACTGGTGTGATCGCGAGC GTTGCCGGCAGTGGTATGAATTATACGGTGACGGTCGACACGATCGGCGGGGTCGGCACACTGCGGCTCGATTTCAGCGA TGGTTCGGGACTCACTCCAGTCGTCGCGGGCGCCTTCGCCGGCGGTCAGAGGTACCTGCGAGTGCCTCCGGGCACGGTGT CCTACGCGTGGGGGGACAACTCCAAGGGGCAGTTGGGTAATGGCACCGGCGGCTCCATGGGTAACAAGAGCGTGGTGCCG GTCGCGGCGGACCGATCCGGCGTGCTCGCGGGCAAAACCCTTGTCGCCCTCGCCACCAGCTATCGGCACAGCCTGGCGCT GGCGAGCGATGGGACCGTTTACGCCTGGGGCTACAACGCCAATGGGCAGTTGGGCAATGGCTCCGGTGGGTTGAGCACGG ATATCAGCAAAGTGCCGGTCGCGGTGGACATGACCGGCGTGCTCGCCGGCAAGACGATCATCGCGATCGCCACGGGCTAC GAACACAGTTTGGCGCTGGCGAGCGATGGCATCGTTTACGCGTGGGGCGACAACTCCGAAGGCCAATTGGGCGATGGCTC CACGACGGACAGCAAGGTACCCATGGCGGTGGACCGCACCGGCGTGCTCACCGGCAAGACAGTGGTTGCCATCGCCGCCG GCAGAAATCACAGCCTGGCGGTCGCCAGCGATGGCACCGTCTACGCTTGGGGGGACAACTACTACGCTCAGTTGGGCGAC GGATCTCTCACCGACAGCTCGGTGCCGGTGCCAGTCGATTTGACCGAACTCGCCGGCAAGTCCGTCGCCGACGTCGCCGG TGGCGACCGGCACAGCCTGGCGCAGGCCAGCGATGGCACCGTCTATGCGTGGGGCGACAATACCAATGGTCAGATGGGCG ATACCATCGCGCACTTGAAGCCGGCGCCGGTGAGCGTCACTGGGGGCAGCGCGCTCGCGGGTAAGACGATCGTTGCCGTG GCCGCTGGCGGCTACCACAACCTCGCGCTGGCCAGCGACGGTACGGTCTGCACGTGGGGCTACAACTATAATGGCCAACT CGGCAACAACTCCAGCGGAGCGGGAGAGAAAAGCACCGTGCCGATCGCGGTGAATTCATATGGCGCCCTGCCGGGGAAGA CCATCGTTGCCGTCGGTGCCGGCGTCAGTCACAGCCTCGCGCTCGCCAGCGATGGAGCCCTTTGCACCTGGGGCTTCAAC AGTCAGGGACAGTTGGGCGACAACTCCACCACCAACCGCACGGTGCCGGTGACGGTGAGCGCCGGCGGCCTGATGTTCCA GGCGCTTGGAACCACCTGCGATGCCGTTTATAGTCTCGCATTGGCCACCGTGCCGCCGCCCACGATCACGGCCGTATCGC CGAGTCGCGGGCTCACCACCGGAGGAGCGTCGGTTGTCATCACCGGCACAAACTTCAGCGGCGCCAGCGCGGTGATGTTC GGCTCGACGGCCGCGACCGGCTTTACGGTGAACAGCGCCACGCAGATCACTGCCACGGCGCCCGCCGGTTCCGTCGGCAC GGTCGACGTCACCGTCACGACGATAGGAGGCGCCAGTGCCGTCTCCGCCGCTGACCAGTTCACCTACATCCTCCCGCTCA CGATCGATAGCGTCGTCGCGCCGGCGGACGCCACCTACGGCGCAGGCCAGGAGTTGGATTTCACGGTCAACTTTAGCGCG GCGGTCACCGTCACCGGCACGCCGCAGCTGGCGCTGACGATGGGCGGTGTGACGCGCTATGCAACCTACGTCTCCGGTGA CGGCACCACCGCGCTCGTATTCCGTTACACCGTACAGTCCGGCGATGGCGCGGCCGGCGGCCTGACTGTCGTTTCGCCGC TACAACTCAACGGTGGCACGATCGTCGATGCGGCGACCACTGCGGCCACGCTCACTTTCACACCGCCGGTCACCACCGGC GTACGTGTCGCCACGGTGCCGCTGGCGCCGACGGTGACCGCTGTACAGGCCGGCGACGGGCGGGCATTGGTGCGATTCAC GGCGCCGGCGAGTAACGGCGGATCGGCGATCACGAGCTACACGGTGACGTCCAGCCCCGATGGGGTGACCGTGAGCGGTG CAGGCGTGGCGCTCACGATTACGGGGCTGACAAACGACACCTCCTACACGTTCAAGGTCACCGCCACGAACGGGGTTGGC GTCAGCGCAGCCTCGGCATCGTCTGCGACGGTCACTCCGACCCGAAGCTGGTCAATGGGCTTTGGCTCGTCGGCGGGCGA TCAAACCTACATCACGAAAACCACCGCGGACGCGGCGGGCAATCTTTACGTCGCGGGGTATTTCTATGGTGCCACGCTCG AGGTGGGGCAGACCACGCTGACCCGGATTGGCACGCGGGACGCGTTTGTGGCGAAACTCACGCCCCAAGGCTCGGTGCTT TGGGCGAAGAATTGCGGCGGCGCGGGCGGCAACGCCTACGCTCGAGGCATCGCGGTGGATGCGAGCGGCCACGTGTATGT GGGCGGGTATTTCACGGCGAGCTGGACGACTCCGGCGCTGACAAAAGTCGGGGCGACCGATGCCTTCGTGATGAAGCTCG ATGCGGCGGACGGCGACGTGCTGTGGGCGCAAAACTACGGTGGCGCGGGCGCGAGGGCGCTCGGTTATGCGCTGGCGGTG GATCCGGCCGGCGACGTCTACCTGGCCGGTTGTGCGTCCTCGGCCGCGTTGACGCTGGCGGCGGGCGTGACGCTCTCACC CATCGGCACCACGACTGAGGACGCGTTGGTGCTGAAGCTCGCTGCGGCCGATGGCGCAGTGCAGTGGGGCAGAAATTGTG GCGGAGCGGGCGCCACGACAAATTTCAACGGGCTGGGCGTGGATGCAGCCGGCAACGTTTATCTGGGCGGATATTTCACG GGTGCGGATCTGACGACCCCGGCGATCGCCAAGCTCGGTGTCTATGACGCGTTGGTGGTGAAACTCTCCGGCGACGGGAC ATTCGCGTGGGCGAAAGATTATGGCGGTGCCGGTGCGGTGGCCGGAATGGAAGCCGTTGCGGTGACCGGTGACGGCGTGT ATGTCGGCGGATATGCCGCCGGCGCGGACCTGACAGTGCCGGTGGTCATCCGGAATGGAGACAGTGACGCCCTGGTGATG AAACTCGATCCGACGGACGGCGGGACCGTGTGGGCCAAAAGTTTCGGCGGCGTCGGTGCGACCGCCGAGGATTGGGCGCT CGGAACGGATGCGACCGGCAACGTCTACGCGGGCGGGTTTTTCGGAGGCGCCAACCTTACCACGCCTGCACTGACGCCGA TCGGGGCGCAGGACACACTGCTGATCAAGCTCAGCGCGAGCGGCGACGTACTATCCGCAAAAAACTATGGCGGCGCGGGC GCTGAGGTGGACATCAAAGGCATCGCGGTCGACGCGATGAACGATCTCTATCTCGTCGGCGGATTCAGCTTCAGCGACCT GACCACGCCGGCACTCCCCAAGATCGGGGCCTACGACTCGCTGTTGATCAAAGAGGCCGCGCCGCCGACGCCGGTGATCA CCAATGCGACGCTATCCGCCAGCGGAACGTACGCGGCTGCGTTCGCGGGCTACACGATCACGGCGAGCGAGAGTCCAACG AGTTTCTCGGCGACGGGGCTGCCGAGCGGCCTGAGCCTGAACGCGGCGACGGGGGAGATCTCTGGCACGCCGACGCAGGC GGGCACGTTCAACGTCGTGCTCCAAGGTACGAACGGCAACGGCACCGGACCGGGATCGACGCTGGTCCTGACAATGGCGA AGGCGCCCCTGTCGGTGACGGCAAACAACGCGAACCGCTATGTGGGCAACGCGAATCCCACCTTCACCGTGAGCTACGCC GGTTTCCGCAACGGCGACACGGCTGCGTCACTGACGACGGCGCCCACGGCGACGACGACGGCGACCGTGGCGTCTCCGGC GGGCACGTACCCGATCACGCCGGCGGGTGGGGTTTCGGGCAACTACACGTTCAGCTACGTCAATGGCACGTTGACGGTCG AAAACGAGCCGGAGCCGCCACCACCGCCGAGCAAGGATTCGCAAACGATCACTTTCGCGGCGCCCGCCGACAAGCTCACG ACCGACGGACCGTTCACGCTGAGTGCGAGCGCGAGTTCAGGGCTGACGGTGAGGTTCGCGATTGCGTCCGGGCCGGCGAC GCTCAGCGGCACCACAGTAACGCTCACCGGGGCTCCGGGCACCGTCACGATTCGCGCGACGCAGCCGGGCAACAGCGATT ACGAAGCCGCCCCGCCGGTCGAGCGCAGCTTCACGGTGGAAGCCGCGCCGCCGCCGCCGATCGTGCCACCGACGAGCGGA GGCACCGCGAGCTTGTCGGTCGGCCCGAGCGGCTCCGGTTGTTCCTACCAGTGGCAGTGCAACGGCTCGAATCTCGGCGG AGCCACTGGTTCGACGTTGACCCTCACCAATGTTCAATCGGCGAACGTCGGACTTTACACTTATACGGTCAGCGCGCCGG ACGGTACGGTGACCACGAGCGATCCGGTGATCGTTGGCCTCACCACGACGGACAAAGTCGAAGGCCTGGCGGAGGAAGTC CTCACCGACGTGCAGCATCCGAACGGAAACACCTACGATCAGGTGCTGCTCGAAGGCCCGAGTGCGACCGTTACAACCAA TCCGAATCAGATCACGCGGACCTCGTTCATCGATCTGAGCGACGATATCGTGCAGGTGGAGTTCTCCGGCGCGGGCACGC TTTCGCTCCTGGTCAATGGCGCGACCATTCCGGCCGCGCCGGTGAACTACATCCAGCCCGGAGTCGATTATGTGCGCGGC CACGCCGCGATCGTGATCACGGGGGCGAACGAAACCAGCAACGTGTGCGTGTTCAGCGTCGGGTCGGTCACGGCCGTGAA TCAGGCGCTGTTCCGCAGTGACGTGACCTACGATGGAGTGGCGGACATTGCGTTCATCGCGATTCAGAGTGCGAATGGCG AGTTTGGCAGCGTTCGCACGGGCAACGTGCACTACTTCGCGAGCCAAGGGTTCACGGGCATCTACGCTCCTGGCGTGGAA TTCGCCGGACCGGTGAACATCGGCGACGTGAGCGCGTTCGACTCGGCGAGTCCGGTCTTGGTCTTTGGCGCGATCGCCGA GGTGCGCGTCGCCGGCGGCAACCTGCATCAGCCGAATGGCCAGACCGTGAAGGTGGACGGCATCACGCAAATCCGTTTCA CCGAAGGGCGAACCTCGCACGATCACGTTCTGCCGGCGCAGACCAACCAAGCCGTGCTCGAACAGGACGGCGTCGACATC ACGGACCTGATTGTGGTGGGCCCGTGA
Upstream 100 bases:
>100_bases TCAGGATCAGCGCGCTTTAGCGCGTTCGGCGAGAGGCCTTGGCTGTGATCCCCCCCCTCGGCGCAGCACAACGCCGCCGA GAACCGTGTGTTGTCCTGTT
Downstream 100 bases:
>100_bases TCGCGCCGCGGAAGCCGTAAGACTTTCTTGCGGCTACGACGTTACGACACTCCAGCCCGGCGGGAACGCCGGGCTCCGCC TTCGGCCGGACATCCACCGA
Product: cell surface receptor IPT/TIG domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1848_residues MKNQLSPLGSVLRLFVVCLVLAGPSAWAAKVTSIARQDPGPAITATSATFRVTFDEDVTGVTTGAFTLGTTGTATGVIAS VAGSGMNYTVTVDTIGGVGTLRLDFSDGSGLTPVVAGAFAGGQRYLRVPPGTVSYAWGDNSKGQLGNGTGGSMGNKSVVP VAADRSGVLAGKTLVALATSYRHSLALASDGTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGY EHSLALASDGIVYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNHSLAVASDGTVYAWGDNYYAQLGD GSLTDSSVPVPVDLTELAGKSVADVAGGDRHSLAQASDGTVYAWGDNTNGQMGDTIAHLKPAPVSVTGGSALAGKTIVAV AAGGYHNLALASDGTVCTWGYNYNGQLGNNSSGAGEKSTVPIAVNSYGALPGKTIVAVGAGVSHSLALASDGALCTWGFN SQGQLGDNSTTNRTVPVTVSAGGLMFQALGTTCDAVYSLALATVPPPTITAVSPSRGLTTGGASVVITGTNFSGASAVMF GSTAATGFTVNSATQITATAPAGSVGTVDVTVTTIGGASAVSAADQFTYILPLTIDSVVAPADATYGAGQELDFTVNFSA AVTVTGTPQLALTMGGVTRYATYVSGDGTTALVFRYTVQSGDGAAGGLTVVSPLQLNGGTIVDAATTAATLTFTPPVTTG VRVATVPLAPTVTAVQAGDGRALVRFTAPASNGGSAITSYTVTSSPDGVTVSGAGVALTITGLTNDTSYTFKVTATNGVG VSAASASSATVTPTRSWSMGFGSSAGDQTYITKTTADAAGNLYVAGYFYGATLEVGQTTLTRIGTRDAFVAKLTPQGSVL WAKNCGGAGGNAYARGIAVDASGHVYVGGYFTASWTTPALTKVGATDAFVMKLDAADGDVLWAQNYGGAGARALGYALAV DPAGDVYLAGCASSAALTLAAGVTLSPIGTTTEDALVLKLAAADGAVQWGRNCGGAGATTNFNGLGVDAAGNVYLGGYFT GADLTTPAIAKLGVYDALVVKLSGDGTFAWAKDYGGAGAVAGMEAVAVTGDGVYVGGYAAGADLTVPVVIRNGDSDALVM KLDPTDGGTVWAKSFGGVGATAEDWALGTDATGNVYAGGFFGGANLTTPALTPIGAQDTLLIKLSASGDVLSAKNYGGAG AEVDIKGIAVDAMNDLYLVGGFSFSDLTTPALPKIGAYDSLLIKEAAPPTPVITNATLSASGTYAAAFAGYTITASESPT SFSATGLPSGLSLNAATGEISGTPTQAGTFNVVLQGTNGNGTGPGSTLVLTMAKAPLSVTANNANRYVGNANPTFTVSYA GFRNGDTAASLTTAPTATTTATVASPAGTYPITPAGGVSGNYTFSYVNGTLTVENEPEPPPPPSKDSQTITFAAPADKLT TDGPFTLSASASSGLTVRFAIASGPATLSGTTVTLTGAPGTVTIRATQPGNSDYEAAPPVERSFTVEAAPPPPIVPPTSG GTASLSVGPSGSGCSYQWQCNGSNLGGATGSTLTLTNVQSANVGLYTYTVSAPDGTVTTSDPVIVGLTTTDKVEGLAEEV LTDVQHPNGNTYDQVLLEGPSATVTTNPNQITRTSFIDLSDDIVQVEFSGAGTLSLLVNGATIPAAPVNYIQPGVDYVRG HAAIVITGANETSNVCVFSVGSVTAVNQALFRSDVTYDGVADIAFIAIQSANGEFGSVRTGNVHYFASQGFTGIYAPGVE FAGPVNIGDVSAFDSASPVLVFGAIAEVRVAGGNLHQPNGQTVKVDGITQIRFTEGRTSHDHVLPAQTNQAVLEQDGVDI TDLIVVGP
Sequences:
NA
Specific function: NA
COG id: COG5184
COG function: function code DZ; Alpha-tubulin suppressor and related RCC1 domain-containing proteins
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA