Definition | Opitutus terrae PB90-1 chromosome, complete genome. |
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Accession | NC_010571 |
Length | 5,957,605 |
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Identifier: 182412947
GI number:
Start: 1399053
End: 1401956
Strand: Direct
Name: Not Available
Synonym: Oter_1125
Alternate gene names: NA
Gene position: NA
Preceding gene: 182412940
Following gene: 182412948
Centisome position: NA
GC content: NA
Gene sequence:
>2904_bases ATGAACACCCACACCCCTCGCAAGTTCCTGCCGGCGCTCTTCCTTGCACCGGCGATTGCCCTGTCTCTATCCGCCCAGGA AGCCGCGCCCGCTCCGGGCGAGCCCGCTTCCGCGCAGGCCGTCGGCGCCGACCAACCCATCGTGCTCGAGCGCTTCACCG TCGATGTCACCCGTGACCAAGGTTACGTCGCGGTCGACTCGCTGGCGGGCGGCCGCACCAACACGCCGATCCGGTTGACG CCGGCGGCGATGTCGTCGGTCACCCGAGCGTTCATCGACGATCTCGGGATCCGCGACGTGCGCGAGGCATTGCGCTGGGC GCCGAACGTCCTGCCCGAGGATCCGCTCGCCGGCCGCGGTTTCGGCGGACAGGCGTTTCAGCCGTGGGCGTTCAACTTCC GCGGCGTCGGCGCGGGCCAGCAGGGCGGGGCGGGTCCGACGCGAAACTACTTCACGTTTTTCGAGAACGCCGACGCCTAC AACATCGAGCGCGTCGAGTTCACCCGCGGGCCCAACGGCATCCTGTTCGGGCTCGGCACCGTCGGCGGCACGCTGTCGAC CTACACGAAAGTACCGCGACTCGACAAAACGTTCATCAGCCCGGCGGTGATCGCGGACGACAACGGCGGCTTGCGCTTCG AGTTGGATTACAATCTCGCGGCGAACGACCAGCTGGCGATCCGGCTCAACGCGCTGCACGACGACGGCCGCGGCTGGCGC AACGGCGACGACAGTCAGAAGCGCGCGATCGACCTCGCGTTTCTCTACAAGCTCAGTGATCGCACGACGCTGCGGCTCGA GATCGAGGGCTTCCGGTCCACGCAGACGCTCATCTCTTCGACCATTGGCGACAAGGCCTCCGGCTGGGACGGCCAGACGG CCTCGGAAACCTGGGGCGCGCTTCCGATCGGCAGCGCGCGCACGGTGAAGATTTCCGCGGCCGGCGGCTGGGGTGACTGG CTGAACGCGTTTCCCGTCTACACGCCCGGACTCGGCAAGGGCCTGATGTTGTGGGCGCCATGGACCAACGATCCCGATCC CGCCAACCCGGCCCAGACCGTGCGCACGTATCACGGCGGCTACGCGTCGACGAGCAGTCTGCTCGATCCCGGTCAGGCGC TGATCTGGGCGCCCTATAAGGGGTGGTATCCCGACCAGATCAAGCTGCCGTGGGAAACGGCTTACTCCTCGACGGCGGCG ATCCCGCTTCGGCCAAGCCGCGAATGGACCTACGGCCACGGGCGCGGCACCAACGATTACGAGAACCTCACCGCCTTCAT CGATCACAGCTTCAACGAGAGCTTAGATCTGCAGATCGGCTTTTTCACGTATGACACCTCGACCGTCGCGAAGGATTACG AAGGCACGGGCGGCGCCTCCGTCGACATCAACCGCCAGCTGCCCGACGGCACGAGCAACCCGAATTTCGGCAAGCCGTTC GCCGACTTTTTCCTGAGCAAGCAAACGCAGGATCGCTCCGTCGACGAGATCCGCGCCCAGCTGAACTACAACTATCGCGG CGAGCTCTTCGGCGCGGGATTCAACCAGCTGCTGGCGGTGTCGGCCTCCGAGCGGCGCACGAAAATCTCCGCGCGGCAAT ATCTGGGGCAGATCGCCAACAGCACCTGGGTCGACAACCCCCGCGACTGGGTGCACAACATGATCTTCGGCCGGATCTAC CTCGATCGGCCGAATGACTTTCAGGACGTCCCGGACGTGATCAACGGCTACTCGGTCGCTTATCTGCCGAAGGCCGACGG CTACTGGTTCGACTTCGACGACAAGTTCGACCTGACGAGCTACGCGCTGTTTTCCAACAGCCGGTTCTTCGACGAAAAGC TCAGCGTGGTGCTGGGCGTGCGCTACGATTCCTACGACGAAGACCTGCGCGAGCTGCGCCGCGGCCCGGACCTGAGCGAC CGGCTGGTGAGTGAGAGCGACTCCGGCACGACCTACACCGCGGGTGCGATCTACTACTTCGGCTGGCTGGGCGTGTTTGC GAATTACTCGGAGAACATCCTGCCGCCGAGCGCCGGCTCGCAGCCCTATCTCAGCGGTTCGCGGCCGGGCCCGGAGCAAA ACCAGGGGTACGACTACGGCCTGCGCATCTCGACAAAGGACGGAAAGTATTACGCGAACATCAGCCGCTACGACTCGCAG TCGCAGAATCGCAACGTGGAGAACCCGGTCGATATTCGCGGCGTCTGGCAGGCGTACAATATCGCCCGCGGCGCGAACCG GGACGACGGCTTCGGCGCGGTGGCGTATTCGGACACCACGGCGATGGACGCGAGCGGCTACGAGTTCGAGGTGACGGCAA ATCCGCTCTCGAACCTGCGGCTGCAGGCCTCCTACAGCCTGCCCGACACGGAGATCGTGGATTTTTATCCCATGACCCGC GCGCACGTGCAGGAGAACCTGCCAACGTGGCAGCAGCAGCTGGACGCAACAACGGATCCGCTGCATGCGAGCGATCTGCG CAACGCGATTTCGCGGACGCAGGACAAGCTGGCGCAATCGGTCGCCGGCGCGCCGCAGCAGCGTTCGGTGGACTACACCG CGAGTTTTTTTGCGAATTACACGTTCACGAACGACATGCTCGACGGTTTCTCCTTCGGCGCGGGCGCGAGCTACACCGGC AAGCCCTATGCCGCCACGTATGCCGGCGAGAAATATTACGGCTCGTCCGTCCACAGCGTCGACGCGGTGCTCGCGTATGA AACCACGATCGGCCGGGCGAAGGCGCGGTTTGCGATCAACGTGCAGAACGTCTTCGACTACGACGAGCCGCTGGTGCTCG ACTATCACAACGATTACACCGACATGAGCGGCCGGCACATCCGCAACGGCTATTTCTACCAGACGCCGCGGACCTTCCGG TTCACGGCGCGGTTTACGTTCTAA
Upstream 100 bases:
>100_bases AGCCGCGTCGCGGCGCAGCTGCGCCTCCGCCCGACTAAGCTGGCGATCTGCGGCCGGACGACTTTCCGGCCTCGGCCACC TTAACCGAAACCGACAAGCC
Downstream 100 bases:
>100_bases CGTGACCGGCTGCGTGTAGGGCGGGGTCTCCGGACCCCGCTCTACATTTCCCGTTGCGAGGTGAATGCCTGCTGGGAGCG CGGGCGTCTTCTCATGAAAA
Product: TonB-dependent receptor plug
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>967_residues MNTHTPRKFLPALFLAPAIALSLSAQEAAPAPGEPASAQAVGADQPIVLERFTVDVTRDQGYVAVDSLAGGRTNTPIRLT PAAMSSVTRAFIDDLGIRDVREALRWAPNVLPEDPLAGRGFGGQAFQPWAFNFRGVGAGQQGGAGPTRNYFTFFENADAY NIERVEFTRGPNGILFGLGTVGGTLSTYTKVPRLDKTFISPAVIADDNGGLRFELDYNLAANDQLAIRLNALHDDGRGWR NGDDSQKRAIDLAFLYKLSDRTTLRLEIEGFRSTQTLISSTIGDKASGWDGQTASETWGALPIGSARTVKISAAGGWGDW LNAFPVYTPGLGKGLMLWAPWTNDPDPANPAQTVRTYHGGYASTSSLLDPGQALIWAPYKGWYPDQIKLPWETAYSSTAA IPLRPSREWTYGHGRGTNDYENLTAFIDHSFNESLDLQIGFFTYDTSTVAKDYEGTGGASVDINRQLPDGTSNPNFGKPF ADFFLSKQTQDRSVDEIRAQLNYNYRGELFGAGFNQLLAVSASERRTKISARQYLGQIANSTWVDNPRDWVHNMIFGRIY LDRPNDFQDVPDVINGYSVAYLPKADGYWFDFDDKFDLTSYALFSNSRFFDEKLSVVLGVRYDSYDEDLRELRRGPDLSD RLVSESDSGTTYTAGAIYYFGWLGVFANYSENILPPSAGSQPYLSGSRPGPEQNQGYDYGLRISTKDGKYYANISRYDSQ SQNRNVENPVDIRGVWQAYNIARGANRDDGFGAVAYSDTTAMDASGYEFEVTANPLSNLRLQASYSLPDTEIVDFYPMTR AHVQENLPTWQQQLDATTDPLHASDLRNAISRTQDKLAQSVAGAPQQRSVDYTASFFANYTFTNDMLDGFSFGAGASYTG KPYAATYAGEKYYGSSVHSVDAVLAYETTIGRAKARFAINVQNVFDYDEPLVLDYHNDYTDMSGRHIRNGYFYQTPRTFR FTARFTF
Sequences:
NA
Specific function: NA
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA