Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 17935782
Identifier: 17935782
GI number: 17935782
Start: 1871141
End: 1871332
Strand: Direct
Name: 17935782
Synonym: Atu1892
Alternate gene names: NA
Gene position: 1871141-1871332 (Clockwise)
Preceding gene: 15889190
Following gene: 15889191
Centisome position: 65.85
GC content: 59.38
Gene sequence:
>192_bases ATGGAAACACCCTGCATCCATATCTGTCGCCTCGATGTGACCCATAGCCTCTGCATCGGCTGCGGACGCACGCTGGATGA AATCGGCGGCTGGGCAGGTTATAGCGACGAAAAGCGCCGCAGGATCATGCGGGCGCTGCCGCAGAGACTGGCAAATTTGA GCGAGACCGCCAAGGAGACGCATACCGCATGA
Upstream 100 bases:
>100_bases GGCCACACCGGCGATACCATCGGCGCCTGCCAGCAGATCACGGAGATCGTTACTCTCGTCGCACTTGCTCTTGCGGCATG ACGGCCTGATATAGATCATC
Downstream 100 bases:
>100_bases ACAGGCTGACCATCGTGCTCCTTATCCTTGCCGTGGGCCTCGGCCTGCTTCTCATCAATCACGATGGTGGCCGCACGCTC GGCATCGATAATGATCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues METPCIHICRLDVTHSLCIGCGRTLDEIGGWAGYSDEKRRRIMRALPQRLANLSETAKETHTA
Sequences:
>Translated_63_residues METPCIHICRLDVTHSLCIGCGRTLDEIGGWAGYSDEKRRRIMRALPQRLANLSETAKETHTA >Mature_63_residues METPCIHICRLDVTHSLCIGCGRTLDEIGGWAGYSDEKRRRIMRALPQRLANLSETAKETHTA
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7083; Mature: 7083
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPCIHICRLDVTHSLCIGCGRTLDEIGGWAGYSDEKRRRIMRALPQRLANLSETAKET CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HTA CCC >Mature Secondary Structure METPCIHICRLDVTHSLCIGCGRTLDEIGGWAGYSDEKRRRIMRALPQRLANLSETAKET CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HTA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA