Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 17935768
Identifier: 17935768
GI number: 17935768
Start: 1859761
End: 1859967
Strand: Reverse
Name: 17935768
Synonym: Atu1878
Alternate gene names: NA
Gene position: 1859967-1859761 (Counterclockwise)
Preceding gene: 159184964
Following gene: 159184962
Centisome position: 65.46
GC content: 54.11
Gene sequence:
>207_bases ATGGGCGCTGGGCGCGGCAGAACGGAGGATACCGCCTGTGGCCTTCAGCGCGGATCAGATTATTCATCCGGTTGGTCAAA AAATGCAACTGCAATATTAGGGGTCGCGTTTGTGCCGCAGAGCTTCCACGAAAAGGCCTTGATCTGTTCATTTCCGGTAC AGAAGGCTTTGGTCATCATGGGAACCGGAGCGTGTGTAAGGCGTTGA
Upstream 100 bases:
>100_bases GCAATCGATACGGCTGCGAGCAGACGGGTGGAAATAGGCATTTCGATCCTCTCTGTTGGTCGTTCATCCGCAGTCTGTTG TTATTTTCAGTGCGGATGCC
Downstream 100 bases:
>100_bases ACAGCGCCTGCGTGCCAAGCCGGGCCCACGATGTCGCATAATTTGCGACCCATAAATGACGGCAGATGAGGAAGCACTGA TGCTGAAGAAGAAAAACACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MGAGRGRTEDTACGLQRGSDYSSGWSKNATAILGVAFVPQSFHEKALICSFPVQKALVIMGTGACVRR
Sequences:
>Translated_68_residues MGAGRGRTEDTACGLQRGSDYSSGWSKNATAILGVAFVPQSFHEKALICSFPVQKALVIMGTGACVRR >Mature_67_residues GAGRGRTEDTACGLQRGSDYSSGWSKNATAILGVAFVPQSFHEKALICSFPVQKALVIMGTGACVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7161; Mature: 7030
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGRGRTEDTACGLQRGSDYSSGWSKNATAILGVAFVPQSFHEKALICSFPVQKALVIM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEE GTGACVRR ECCHHHCC >Mature Secondary Structure GAGRGRTEDTACGLQRGSDYSSGWSKNATAILGVAFVPQSFHEKALICSFPVQKALVIM CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEE GTGACVRR ECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA