Click here to switch to the map view.

The map label for this gene is 17935366

Identifier: 17935366

GI number: 17935366

Start: 1462627

End: 1462980

Strand: Direct

Name: 17935366

Synonym: Atu1466

Alternate gene names: NA

Gene position: 1462627-1462980 (Clockwise)

Preceding gene: 15888786

Following gene: 159184770

Centisome position: 51.47

GC content: 53.67

Gene sequence:

>354_bases
TTGGCGGGGTTCTCACGGACGCAACGAGGCGTTTCAGCGACCAGACCGAGGCTCCAACGACGAGGCGTAGCTAGTCGGAT
TTTTTCTCCGGCAAGCCCTTGCGTTTTGTCGATGCAAAATCCTCAAGTTCCTTTTCTGTCATGGACTTCTCCATGCTTTT
TGAAGCGCCTTGTAAACTGGATTTTTTCACTTCACCGCGTTTGGCGGCGAGCGCGGCACCCGCCGCTTTCTGCTGGGCTT
TCGATTTTGCTGGCATGTCTGCCTCCTTTGAAACAATGGCTTTGCAAGGAAAATGCCGCGTCGCGTCGATCGTTCCCTTG
CAACGATCAAGCCTGCGGCAAAATTCCCCTTTGA

Upstream 100 bases:

>100_bases
GATTCTTGCTCCATCTGCGCCATCGTCATCTCAGCCGTCCCGTATAGCGGTTTCGAGGCCGCGTCTGTGTGCCCATCCGA
CCTTCGTCATAGAAAGCGGG

Downstream 100 bases:

>100_bases
AATCGGCAGGAAAGCGGGATATCGCCTAGGACATGGACGCAAATCGAAAACGACGGCTGACAGGGATGGAGAAGATGCTT
CGCATTTTCTGCGCGACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAGFSRTQRGVSATRPRLQRRGVASRIFSPASPCVLSMQNPQVPFLSWTSPCFLKRLVNWIFSLHRVWRRARHPPLSAGL
SILLACLPPLKQWLCKENAASRRSFPCNDQACGKIPL

Sequences:

>Translated_117_residues
MAGFSRTQRGVSATRPRLQRRGVASRIFSPASPCVLSMQNPQVPFLSWTSPCFLKRLVNWIFSLHRVWRRARHPPLSAGL
SILLACLPPLKQWLCKENAASRRSFPCNDQACGKIPL
>Mature_116_residues
AGFSRTQRGVSATRPRLQRRGVASRIFSPASPCVLSMQNPQVPFLSWTSPCFLKRLVNWIFSLHRVWRRARHPPLSAGLS
ILLACLPPLKQWLCKENAASRRSFPCNDQACGKIPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13199; Mature: 13068

Theoretical pI: Translated: 12.26; Mature: 12.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFSRTQRGVSATRPRLQRRGVASRIFSPASPCVLSMQNPQVPFLSWTSPCFLKRLVNW
CCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
IFSLHRVWRRARHPPLSAGLSILLACLPPLKQWLCKENAASRRSFPCNDQACGKIPL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGFSRTQRGVSATRPRLQRRGVASRIFSPASPCVLSMQNPQVPFLSWTSPCFLKRLVNW
CCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
IFSLHRVWRRARHPPLSAGLSILLACLPPLKQWLCKENAASRRSFPCNDQACGKIPL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA