Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is corA [H]
Identifier: 17547493
GI number: 17547493
Start: 2984681
End: 2985643
Strand: Direct
Name: corA [H]
Synonym: RSc2774
Alternate gene names: 17547493
Gene position: 2984681-2985643 (Clockwise)
Preceding gene: 17547489
Following gene: 17547502
Centisome position: 80.31
GC content: 63.55
Gene sequence:
>963_bases ATGATCAACCTGTTCGTTGTGCAAAAAGGCCGTCTCGCGCAAGAACAGGTCGAGGACCGCAACGAACTGCTGCAGCACAA GCCGATCTGGATCGACGTGATCGATCCGGACGACGAAGAGCTGGCCTGGATCAAGGACACCTACGGCGTGGTGCTGCCCG AGCTGGAACAGCTGGGCGACCTGGAGGCCTCCGCCCGCTACTTCGAGGGCGAAGACAGCCACATCCACATCCGCACCGAC TTCCTGCTCGACGAGGAGACCAGCTCGCGCAACGTGCGCGTGGCCTTCGTGCTGACCAAGGACGTGCTCTTCTCGATCCA CGACGAAGACCTGCCGGCGTTCCGGCTGGTGCGCATGCGGGCGCGGCTGCGGCCCGGCTCGGTGCGCAACGCCAAGGACG TGCTGATGGACCTGTACGCCACCGACGCGGAATACTCGGCCGACTCGATCGAAGAAGTCTACGAACGCCTGGAAGACGCC AGCAAGCGTGTGCTGGCCGACGAAGTGACCGACCAGGCCGCCGCCGACGTGCTCGAGATCATCGCCCGCGTGGAAGACCT CAACGGCCGCATCCGCCGCAACGTGATGGACACGCGCCGCGCGGTGTCCTTCCTGCTGCGCAGCCAGATGCTGTCGCCCG ACCAGCAGGACGAGGCGCGCCAGGTGCTGCGCGACATCGACTCCATCGAGAACCACACCGCCTTCCTGTCCGACAAGGTC AACTTCCTGATGGACGCCACGGTCGGCTTCATCAACATCAACCAGAACAAGATCATCAAGCTGTTCTCGGTGGTCTCGGT GGCGCTGATGCCGCCGACCCTGATCGCCTCGATCTACGGCATGAACTTCAAGGTGATGCCGGAGCTGGACTGGGCGGAGG GCTACCCCTATGCGATCGTGCTGATGATCGTGTCGGCGGCGATCCCGCTGGTGTATTTCCGGCGCAAGGGCTGGCTGAAA TAG
Upstream 100 bases:
>100_bases ATCCGCCGTTTCCGGCTGAATCCGCTGCGTCTTTACGCTACACTCGGCGCGTTTTTGGCGCACCCAGCCGCCTGATCGCC CCAGTTCCAAGGACATCCGC
Downstream 100 bases:
>100_bases GCCGCACCCGGCGGCGCGGCCCGCTCCAGCGGCAGCATCAGCCCGAGTAGGCCTTGTAGCTCACCTTGTTGGTGCCTGTG ACTTGGCTCTTGTCGGGAGC
Product: magnesium/cobalt transporter CorA
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MINLFVVQKGRLAQEQVEDRNELLQHKPIWIDVIDPDDEELAWIKDTYGVVLPELEQLGDLEASARYFEGEDSHIHIRTD FLLDEETSSRNVRVAFVLTKDVLFSIHDEDLPAFRLVRMRARLRPGSVRNAKDVLMDLYATDAEYSADSIEEVYERLEDA SKRVLADEVTDQAAADVLEIIARVEDLNGRIRRNVMDTRRAVSFLLRSQMLSPDQQDEARQVLRDIDSIENHTAFLSDKV NFLMDATVGFININQNKIIKLFSVVSVALMPPTLIASIYGMNFKVMPELDWAEGYPYAIVLMIVSAAIPLVYFRRKGWLK
Sequences:
>Translated_320_residues MINLFVVQKGRLAQEQVEDRNELLQHKPIWIDVIDPDDEELAWIKDTYGVVLPELEQLGDLEASARYFEGEDSHIHIRTD FLLDEETSSRNVRVAFVLTKDVLFSIHDEDLPAFRLVRMRARLRPGSVRNAKDVLMDLYATDAEYSADSIEEVYERLEDA SKRVLADEVTDQAAADVLEIIARVEDLNGRIRRNVMDTRRAVSFLLRSQMLSPDQQDEARQVLRDIDSIENHTAFLSDKV NFLMDATVGFININQNKIIKLFSVVSVALMPPTLIASIYGMNFKVMPELDWAEGYPYAIVLMIVSAAIPLVYFRRKGWLK >Mature_320_residues MINLFVVQKGRLAQEQVEDRNELLQHKPIWIDVIDPDDEELAWIKDTYGVVLPELEQLGDLEASARYFEGEDSHIHIRTD FLLDEETSSRNVRVAFVLTKDVLFSIHDEDLPAFRLVRMRARLRPGSVRNAKDVLMDLYATDAEYSADSIEEVYERLEDA SKRVLADEVTDQAAADVLEIIARVEDLNGRIRRNVMDTRRAVSFLLRSQMLSPDQQDEARQVLRDIDSIENHTAFLSDKV NFLMDATVGFININQNKIIKLFSVVSVALMPPTLIASIYGMNFKVMPELDWAEGYPYAIVLMIVSAAIPLVYFRRKGWLK
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=320, Percent_Identity=44.0625, Blast_Score=268, Evalue=5e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 36718; Mature: 36718
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLFVVQKGRLAQEQVEDRNELLQHKPIWIDVIDPDDEELAWIKDTYGVVLPELEQLGD CEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHCCCCCCCHHHHCC LEASARYFEGEDSHIHIRTDFLLDEETSSRNVRVAFVLTKDVLFSIHDEDLPAFRLVRMR CHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEHHHHEECCCCCHHHHHHHHH ARLRPGSVRNAKDVLMDLYATDAEYSADSIEEVYERLEDASKRVLADEVTDQAAADVLEI HHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IARVEDLNGRIRRNVMDTRRAVSFLLRSQMLSPDQQDEARQVLRDIDSIENHTAFLSDKV HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NFLMDATVGFININQNKIIKLFSVVSVALMPPTLIASIYGMNFKVMPELDWAEGYPYAIV HHHHHCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCCCCCHHHH LMIVSAAIPLVYFRRKGWLK HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MINLFVVQKGRLAQEQVEDRNELLQHKPIWIDVIDPDDEELAWIKDTYGVVLPELEQLGD CEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHCCCCCCCHHHHCC LEASARYFEGEDSHIHIRTDFLLDEETSSRNVRVAFVLTKDVLFSIHDEDLPAFRLVRMR CHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEHHHHEECCCCCHHHHHHHHH ARLRPGSVRNAKDVLMDLYATDAEYSADSIEEVYERLEDASKRVLADEVTDQAAADVLEI HHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IARVEDLNGRIRRNVMDTRRAVSFLLRSQMLSPDQQDEARQVLRDIDSIENHTAFLSDKV HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NFLMDATVGFININQNKIIKLFSVVSVALMPPTLIASIYGMNFKVMPELDWAEGYPYAIV HHHHHCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCCCCCCHHHH LMIVSAAIPLVYFRRKGWLK HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA