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The map label for this gene is yajC [H]

Identifier: 17547433

GI number: 17547433

Start: 2920147

End: 2920476

Strand: Direct

Name: yajC [H]

Synonym: RSc2714

Alternate gene names: 17547433

Gene position: 2920147-2920476 (Clockwise)

Preceding gene: 17547432

Following gene: 17547434

Centisome position: 78.57

GC content: 61.21

Gene sequence:

>330_bases
ATGATTTCCGACGCTTACGCACAGACCGCCGGCGCCGCGCCGGGGGGTGCCGGAAATGGCCTGATGAGCTTCCTGCCCAT
CATCCTGATGTTCGTGGTGCTGTGGTTCATCATGATCCGCCCGCAGATGAAGCGGCAGAAGGAAACCAAGACGATGCTCG
AGGCGCTGGCCAAGGGCGACGAAGTGGTGACCGCCGGCGGCATCCTGGGCAAGGTGACCAAGGTGACCGACCAGTACATC
ACGGTCGAAGTCGCCCCGAATACCGAACTCACCGTGCAGAAGAATGCTGTGACGACCGTGCTGCCCAAAGGCACGCTCAA
GTCGCTGTAA

Upstream 100 bases:

>100_bases
AAACCCGCCGATGCACCCATTTTCCGCTGGACCGCGATGGTAGAATATCCGGTCCGATTTTTGACCGATTGACGAACCAT
TACGGAGTTTGACCGTGCTG

Downstream 100 bases:

>100_bases
TCCGGCTTGCCCGGCGCCGCGCGCTCCGCGCGGCCGCCGGCACCCCAGGCAGCGCCTATCCTGAGATTGCCGCGCCGTCG
CCTTCCCGCGCCGCCTGACC

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MISDAYAQTAGAAPGGAGNGLMSFLPIILMFVVLWFIMIRPQMKRQKETKTMLEALAKGDEVVTAGGILGKVTKVTDQYI
TVEVAPNTELTVQKNAVTTVLPKGTLKSL

Sequences:

>Translated_109_residues
MISDAYAQTAGAAPGGAGNGLMSFLPIILMFVVLWFIMIRPQMKRQKETKTMLEALAKGDEVVTAGGILGKVTKVTDQYI
TVEVAPNTELTVQKNAVTTVLPKGTLKSL
>Mature_109_residues
MISDAYAQTAGAAPGGAGNGLMSFLPIILMFVVLWFIMIRPQMKRQKETKTMLEALAKGDEVVTAGGILGKVTKVTDQYI
TVEVAPNTELTVQKNAVTTVLPKGTLKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=111, Percent_Identity=42.3423423423423, Blast_Score=93, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11639; Mature: 11639

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISDAYAQTAGAAPGGAGNGLMSFLPIILMFVVLWFIMIRPQMKRQKETKTMLEALAKGD
CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
EVVTAGGILGKVTKVTDQYITVEVAPNTELTVQKNAVTTVLPKGTLKSL
CEEECCCHHHHHHHHCCCEEEEEECCCCCEEEECCCEEEECCCCCCCCC
>Mature Secondary Structure
MISDAYAQTAGAAPGGAGNGLMSFLPIILMFVVLWFIMIRPQMKRQKETKTMLEALAKGD
CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
EVVTAGGILGKVTKVTDQYITVEVAPNTELTVQKNAVTTVLPKGTLKSL
CEEECCCHHHHHHHHCCCEEEEEECCCCCEEEECCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]