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The map label for this gene is 17547329

Identifier: 17547329

GI number: 17547329

Start: 2812223

End: 2812513

Strand: Direct

Name: 17547329

Synonym: RSc2610

Alternate gene names: NA

Gene position: 2812223-2812513 (Clockwise)

Preceding gene: 17547319

Following gene: 17547330

Centisome position: 75.67

GC content: 60.14

Gene sequence:

>291_bases
GTGGCGGCAAAGTACTCATTGGCGAAGGCGTTGAAGACGGTCAGGAAGGCGCGCGGCTTGAGCCAGGAAGCGTTCTCCGA
CGTGTCGAGCCGCACCTATATGAGTACGCTGGAGCGCGACCTGAAAAGTCCGACTCTGCACAAGCTGACCGAGCTGTGCG
AGGTCATGGACGTGCATCCGCTCACGTTGTTGACGCTGGCCTTTGCGGGCGACAGCACGCGCAAGGCTGACGAGTTGTTG
GCGCAGGTGCGCCAGGAACTTGAGGCGGTACTGAACTCTGATGGAGATTGA

Upstream 100 bases:

>100_bases
AAAAGCACGAAAGCGGCCTCTCAGTCATGAATGAACACTATAGATTGTAGCCCTATAGGATGCAATGGGTTGTCATCTTG
GTTTTAAGAGGAAACCATAG

Downstream 100 bases:

>100_bases
GAAGCGACATGGCATATCGAAATGGAAACTACACCGCCTTTTACGTTGCAGAGCCATTCCATCCCAGCTCGCTAGGTGCC
AATGCGACGAAGGATTTTCA

Product: transcription regulator protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein; PbsX Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PbsX Family; Helix-Turn-Helix Domain-Containing

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MAAKYSLAKALKTVRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLHKLTELCEVMDVHPLTLLTLAFAGDSTRKADELL
AQVRQELEAVLNSDGD

Sequences:

>Translated_96_residues
MAAKYSLAKALKTVRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLHKLTELCEVMDVHPLTLLTLAFAGDSTRKADELL
AQVRQELEAVLNSDGD
>Mature_95_residues
AAKYSLAKALKTVRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLHKLTELCEVMDVHPLTLLTLAFAGDSTRKADELLA
QVRQELEAVLNSDGD

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10597; Mature: 10466

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKYSLAKALKTVRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLHKLTELCEVMDVHP
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
LTLLTLAFAGDSTRKADELLAQVRQELEAVLNSDGD
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AAKYSLAKALKTVRKARGLSQEAFSDVSSRTYMSTLERDLKSPTLHKLTELCEVMDVHP
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
LTLLTLAFAGDSTRKADELLAQVRQELEAVLNSDGD
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA