Definition | Ralstonia solanacearum GMI1000, complete genome. |
---|---|
Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is yyaQ [H]
Identifier: 17547311
GI number: 17547311
Start: 2797761
End: 2798117
Strand: Direct
Name: yyaQ [H]
Synonym: RSc2592
Alternate gene names: 17547311
Gene position: 2797761-2798117 (Clockwise)
Preceding gene: 17547310
Following gene: 17547317
Centisome position: 75.28
GC content: 50.42
Gene sequence:
>357_bases ATGATTACACGTTCTGAAATTTTCGAATACGCCGAGAAGACGTTCGGTGCCAAGCCTGATTACCCGTTCAAGACATATCC GCACTATGCGATCCTTCGCCATTTGGACGACCAGAAATGGTTTGGACTGGTCATGAATGTCCCCAAGGATAAGTTGGGCC TCGAAGGTGAGGGAGATGTCGATGTCATCGACATCAAGTGCCATCCGGACAAAGTCCACGACCTCAAGATCAAAGCCGGT TTTCTACCGGCCTATCACATGAACAAGGAACACTGGCTCACCGCTGTCCTCGATGGATCAGTCACCAAGGAGGAAGTCTT TTCGCTCCTCGCGGAAAGCTACGAACTGACGAAGTAG
Upstream 100 bases:
>100_bases TTGGCGCTCCACCGGATGTTCCTTGGAAACGGCCGTCGCCAAGGCGCGGGCGCCCAGGCCCGACAAACAGTCTGGATTCA CTTATTCCCTGGAGAACATC
Downstream 100 bases:
>100_bases CTCGATCATTGTCGCTTCAAAAGCCCGTCAGGTCCGCTCGATGCCCGCGAAGGTCTGCAAGACTTCTTCCGCATGAGTCG TGGGATCGTAAGGTGGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MITRSEIFEYAEKTFGAKPDYPFKTYPHYAILRHLDDQKWFGLVMNVPKDKLGLEGEGDVDVIDIKCHPDKVHDLKIKAG FLPAYHMNKEHWLTAVLDGSVTKEEVFSLLAESYELTK
Sequences:
>Translated_118_residues MITRSEIFEYAEKTFGAKPDYPFKTYPHYAILRHLDDQKWFGLVMNVPKDKLGLEGEGDVDVIDIKCHPDKVHDLKIKAG FLPAYHMNKEHWLTAVLDGSVTKEEVFSLLAESYELTK >Mature_118_residues MITRSEIFEYAEKTFGAKPDYPFKTYPHYAILRHLDDQKWFGLVMNVPKDKLGLEGEGDVDVIDIKCHPDKVHDLKIKAG FLPAYHMNKEHWLTAVLDGSVTKEEVFSLLAESYELTK
Specific function: Unknown
COG id: COG2315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007351 [H]
Pfam domain/function: PF04237 DUF419 [H]
EC number: NA
Molecular weight: Translated: 13614; Mature: 13614
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRSEIFEYAEKTFGAKPDYPFKTYPHYAILRHLDDQKWFGLVMNVPKDKLGLEGEGDV CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCHHHCCCCCCCCE DVIDIKCHPDKVHDLKIKAGFLPAYHMNKEHWLTAVLDGSVTKEEVFSLLAESYELTK EEEEEEECCCCCEEEEEECCCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MITRSEIFEYAEKTFGAKPDYPFKTYPHYAILRHLDDQKWFGLVMNVPKDKLGLEGEGDV CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCHHHCCCCCCCCE DVIDIKCHPDKVHDLKIKAGFLPAYHMNKEHWLTAVLDGSVTKEEVFSLLAESYELTK EEEEEEECCCCCEEEEEECCCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]