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The map label for this gene is 17547012

Identifier: 17547012

GI number: 17547012

Start: 2485952

End: 2487532

Strand: Reverse

Name: 17547012

Synonym: RSc2293

Alternate gene names: NA

Gene position: 2487532-2485952 (Counterclockwise)

Preceding gene: 17547013

Following gene: 17547011

Centisome position: 66.93

GC content: 70.4

Gene sequence:

>1581_bases
ATGTGTCTCGCCATGCCGGCGGGCCAGGCGGGCAGTGCGTCGGCGGCGGATCCGGGCGAGGCGATCTTCCGTGAGGGCGT
GCTGCCCTCCGGTGCGCCGCTGGTCGCCACGCGCGACGGCGGCATGCGCATGGAGGGCGCGGCGGGAGCCTGTGTCAACT
GCCACCGGCGCAGCGGGCTGGGCGCGAGATCCGGCCTGTCCAGCATTCCGCCGATCACCGGGCGGTACTTGTTCCATCCG
CCTGCCAAAAGCGGCGAGGACCGCGGCATTCCCTACGTCGAGACCATGCGCGGCGACCGCGAGCCGTATACCGATGCGAC
GCTGGCGCGGGCGATCCGCGACGGGATCGATTCGCAGGGGCGGCCGATGCGCTACCTGATGCCGCATTTCACGCTGGGCG
ATGGCGACATGGCGGCCCTGATCGCCTATCTGAAGCGGCTCGACCCGCGCCGCGCACCCGGCGTGGGCAGCGGCGTGCTG
CATTTCGCCACCATCATCACGCCCGACGCCGATCCCGTGAAGCGCCGCGGCATGCTCGATGTGCTGGAGCACTACGTGGC
CGAGAAGAACGCCTTCCCGCTGGGCGCGACGCCGCCGCTGCGCGCATCGCGCAAGATGATGTACATGGTCAACCGCCAAT
GGCAGCTGCACGTCTGGGAACTGAGCGGCCCGCCGCAGACATGGGAGGCGCAGCTCGAGCAGCATCTGGCCGCCGAACCG
GTCTTTGCCGTGGTGTCGGGGCTGGGCGGCAAGAACTGGGCACCGGTGAGCGCGTTCTGCGAGCGCGCGGCCGTGCCGTG
CCTGTTCCCGAACGTCGAGGCACCGGACATCGGCCACGGCGATTTCTACGCGCTGTATTTCTCGCGCGGCGTGCGGCTCG
AAGCCGGCTTGCTGGCCGCCGGCGTTGCCGACGCGATGCGCGGTGGCGCGCTCAAGGCGGTGCACCAGGTCTACCGGAGC
GGCGACACCGGCGAAGCCGGCGCACAGGCATTGGCGCAGGCGCTGCGGAGCCAGGGCATCGATGTCTCGAGCCACGCGCT
GGCGCCGGGCGAGCGCCTCGCCAAGGCATTCGTCGGCATGTCGAAGGACGATGCCCTGGTGCTCTGGCTGCGCCCGGCCG
ATCTCGCCGCCCTGGGCAAGACCGTGCCCACGCAGACCGTGTTCATGTCGGGGCTCATGGGCGGCCTCGAGCGCGCGCCG
TTGCCGGCGCTCTGGCGTGACGTGACGCGCATTGCCTATCCGTTCGACCTGCCGGAGCGCCGGCGTGTGCGCGTCGACTA
CGCGCTCGGGTGGTTCGCCATCCGGCATATCCCGGTGGTCGATGAACAGGTGCAGGCCGACACCTTCCTGGCCTGCGGGC
TGCTCGCCGAGACCCTGAGCCATATGGCCGATACGTTCGTGCGCGACTACCTCGTGGAGCGCATCGAGGACATGCTCGAG
CGCCGCGTGATCACCGGCTACTACCCGCGCCTGACCCTCGCGCCGGGGCAGCGTTTCGCGTCGAAGGGCGGCTACCTGGT
GCACTTTGCCGACGCCGGCGGAACCCGGATCGTGGCGGACGGCGACTGGATCGTGCCTTAG

Upstream 100 bases:

>100_bases
TGGCGGCACCCTAGCCGCGGAGCGGGCCGTGACCACGCGGCAGGGGGCCCCTCGCAGGTGGAGGACGCTATCGTGCACGC
TGGCTGCGGCGGGGGCCTTC

Downstream 100 bases:

>100_bases
CGCACCGCATTCGCAGGGTAGCGCCAGGGCAGGATTTGCCTACGGCCCGGGTGGGGGGATCCCCATTTCGATCGGCCGCG
GGGTTGCACACAATGAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MCLAMPAGQAGSASAADPGEAIFREGVLPSGAPLVATRDGGMRMEGAAGACVNCHRRSGLGARSGLSSIPPITGRYLFHP
PAKSGEDRGIPYVETMRGDREPYTDATLARAIRDGIDSQGRPMRYLMPHFTLGDGDMAALIAYLKRLDPRRAPGVGSGVL
HFATIITPDADPVKRRGMLDVLEHYVAEKNAFPLGATPPLRASRKMMYMVNRQWQLHVWELSGPPQTWEAQLEQHLAAEP
VFAVVSGLGGKNWAPVSAFCERAAVPCLFPNVEAPDIGHGDFYALYFSRGVRLEAGLLAAGVADAMRGGALKAVHQVYRS
GDTGEAGAQALAQALRSQGIDVSSHALAPGERLAKAFVGMSKDDALVLWLRPADLAALGKTVPTQTVFMSGLMGGLERAP
LPALWRDVTRIAYPFDLPERRRVRVDYALGWFAIRHIPVVDEQVQADTFLACGLLAETLSHMADTFVRDYLVERIEDMLE
RRVITGYYPRLTLAPGQRFASKGGYLVHFADAGGTRIVADGDWIVP

Sequences:

>Translated_526_residues
MCLAMPAGQAGSASAADPGEAIFREGVLPSGAPLVATRDGGMRMEGAAGACVNCHRRSGLGARSGLSSIPPITGRYLFHP
PAKSGEDRGIPYVETMRGDREPYTDATLARAIRDGIDSQGRPMRYLMPHFTLGDGDMAALIAYLKRLDPRRAPGVGSGVL
HFATIITPDADPVKRRGMLDVLEHYVAEKNAFPLGATPPLRASRKMMYMVNRQWQLHVWELSGPPQTWEAQLEQHLAAEP
VFAVVSGLGGKNWAPVSAFCERAAVPCLFPNVEAPDIGHGDFYALYFSRGVRLEAGLLAAGVADAMRGGALKAVHQVYRS
GDTGEAGAQALAQALRSQGIDVSSHALAPGERLAKAFVGMSKDDALVLWLRPADLAALGKTVPTQTVFMSGLMGGLERAP
LPALWRDVTRIAYPFDLPERRRVRVDYALGWFAIRHIPVVDEQVQADTFLACGLLAETLSHMADTFVRDYLVERIEDMLE
RRVITGYYPRLTLAPGQRFASKGGYLVHFADAGGTRIVADGDWIVP
>Mature_526_residues
MCLAMPAGQAGSASAADPGEAIFREGVLPSGAPLVATRDGGMRMEGAAGACVNCHRRSGLGARSGLSSIPPITGRYLFHP
PAKSGEDRGIPYVETMRGDREPYTDATLARAIRDGIDSQGRPMRYLMPHFTLGDGDMAALIAYLKRLDPRRAPGVGSGVL
HFATIITPDADPVKRRGMLDVLEHYVAEKNAFPLGATPPLRASRKMMYMVNRQWQLHVWELSGPPQTWEAQLEQHLAAEP
VFAVVSGLGGKNWAPVSAFCERAAVPCLFPNVEAPDIGHGDFYALYFSRGVRLEAGLLAAGVADAMRGGALKAVHQVYRS
GDTGEAGAQALAQALRSQGIDVSSHALAPGERLAKAFVGMSKDDALVLWLRPADLAALGKTVPTQTVFMSGLMGGLERAP
LPALWRDVTRIAYPFDLPERRRVRVDYALGWFAIRHIPVVDEQVQADTFLACGLLAETLSHMADTFVRDYLVERIEDMLE
RRVITGYYPRLTLAPGQRFASKGGYLVHFADAGGTRIVADGDWIVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56836; Mature: 56836

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLAMPAGQAGSASAADPGEAIFREGVLPSGAPLVATRDGGMRMEGAAGACVNCHRRSGL
CEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHCCC
GARSGLSSIPPITGRYLFHPPAKSGEDRGIPYVETMRGDREPYTDATLARAIRDGIDSQG
CHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
RPMRYLMPHFTLGDGDMAALIAYLKRLDPRRAPGVGSGVLHFATIITPDADPVKRRGMLD
CCCEEECCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCHHHHCCHHH
VLEHYVAEKNAFPLGATPPLRASRKMMYMVNRQWQLHVWELSGPPQTWEAQLEQHLAAEP
HHHHHHHHCCCCCCCCCCCCHHHHHHHEEECCCEEEEEEEECCCCHHHHHHHHHHHCCCH
VFAVVSGLGGKNWAPVSAFCERAAVPCLFPNVEAPDIGHGDFYALYFSRGVRLEAGLLAA
HHHHHHCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEECCCCEEECHHHHH
GVADAMRGGALKAVHQVYRSGDTGEAGAQALAQALRSQGIDVSSHALAPGERLAKAFVGM
HHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
SKDDALVLWLRPADLAALGKTVPTQTVFMSGLMGGLERAPLPALWRDVTRIAYPFDLPER
CCCCEEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
RRVRVDYALGWFAIRHIPVVDEQVQADTFLACGLLAETLSHMADTFVRDYLVERIEDMLE
CEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRVITGYYPRLTLAPGQRFASKGGYLVHFADAGGTRIVADGDWIVP
HHHHHCCCCEEEECCCHHHHCCCCEEEEEECCCCCEEEECCCEECC
>Mature Secondary Structure
MCLAMPAGQAGSASAADPGEAIFREGVLPSGAPLVATRDGGMRMEGAAGACVNCHRRSGL
CEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHCCC
GARSGLSSIPPITGRYLFHPPAKSGEDRGIPYVETMRGDREPYTDATLARAIRDGIDSQG
CHHCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
RPMRYLMPHFTLGDGDMAALIAYLKRLDPRRAPGVGSGVLHFATIITPDADPVKRRGMLD
CCCEEECCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCHHHHCCHHH
VLEHYVAEKNAFPLGATPPLRASRKMMYMVNRQWQLHVWELSGPPQTWEAQLEQHLAAEP
HHHHHHHHCCCCCCCCCCCCHHHHHHHEEECCCEEEEEEEECCCCHHHHHHHHHHHCCCH
VFAVVSGLGGKNWAPVSAFCERAAVPCLFPNVEAPDIGHGDFYALYFSRGVRLEAGLLAA
HHHHHHCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEECCCCEEECHHHHH
GVADAMRGGALKAVHQVYRSGDTGEAGAQALAQALRSQGIDVSSHALAPGERLAKAFVGM
HHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
SKDDALVLWLRPADLAALGKTVPTQTVFMSGLMGGLERAPLPALWRDVTRIAYPFDLPER
CCCCEEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
RRVRVDYALGWFAIRHIPVVDEQVQADTFLACGLLAETLSHMADTFVRDYLVERIEDMLE
CEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRVITGYYPRLTLAPGQRFASKGGYLVHFADAGGTRIVADGDWIVP
HHHHHCCCCEEEECCCHHHHCCCCEEEEEECCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA