Click here to switch to the map view.

The map label for this gene is 17546998

Identifier: 17546998

GI number: 17546998

Start: 2474928

End: 2475161

Strand: Reverse

Name: 17546998

Synonym: RSc2279

Alternate gene names: NA

Gene position: 2475161-2474928 (Counterclockwise)

Preceding gene: 17547000

Following gene: 17546997

Centisome position: 66.6

GC content: 70.09

Gene sequence:

>234_bases
ATGAAGAAACTCCTGGTTGCACTCGTCTCGACCGTCTTTGCCGCCGGCGCCTTCGCGCAGGCAACCGCGCCCGCCATGCC
GGCCGCGCCGGCCCCGGCAGCGCCCGCCGCCGTGCCCGAACCGGCTGCCCCGGCGCCGGCCCCGCACGAGAAGAAGGCAC
ACAAGAAGAAAAAGAAGCACCACGACCATCGCCCGAAGCAGCAGGACAAGAGCGCCTACGGCGCGGGGAACTGA

Upstream 100 bases:

>100_bases
GCGGGTGGCGCCGGGCGTTGAATCGTTGCGGTGCATGGGCGCGGTGGGTCACGCCCGGCAATCGGCGCGCCGCATGTGAC
TTTCTGACAAGGACAATACG

Downstream 100 bases:

>100_bases
TCGGCGGATCGCCCCCGCTTCCGGGCACATCCGAGGCGCCGGCCCTTGCGAGGGGGCCGGCGCCTTGTTTTTGGGGCCGG
CCGCCGGCGCGGTAACGTGG

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MKKLLVALVSTVFAAGAFAQATAPAMPAAPAPAAPAAVPEPAAPAPAPHEKKAHKKKKKHHDHRPKQQDKSAYGAGN

Sequences:

>Translated_77_residues
MKKLLVALVSTVFAAGAFAQATAPAMPAAPAPAAPAAVPEPAAPAPAPHEKKAHKKKKKHHDHRPKQQDKSAYGAGN
>Mature_77_residues
MKKLLVALVSTVFAAGAFAQATAPAMPAAPAPAAPAAVPEPAAPAPAPHEKKAHKKKKKHHDHRPKQQDKSAYGAGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7892; Mature: 7892

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLVALVSTVFAAGAFAQATAPAMPAAPAPAAPAAVPEPAAPAPAPHEKKAHKKKKKH
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HDHRPKQQDKSAYGAGN
CCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MKKLLVALVSTVFAAGAFAQATAPAMPAAPAPAAPAAVPEPAAPAPAPHEKKAHKKKKKH
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HDHRPKQQDKSAYGAGN
CCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA