| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is livG [H]
Identifier: 17546965
GI number: 17546965
Start: 2439281
End: 2440054
Strand: Reverse
Name: livG [H]
Synonym: RSc2246
Alternate gene names: 17546965
Gene position: 2440054-2439281 (Counterclockwise)
Preceding gene: 17546966
Following gene: 17546964
Centisome position: 65.66
GC content: 71.19
Gene sequence:
>774_bases ATGAACGCACCGTCGATGCCTCCCGCGCCGACACTCAGCACGCACGGCCTGTCCAAACGCTGGGGCGGCTTCCACGCCAA CGCGGACATCTCGCTGACGTTCGCGCCGGGCGCGCACCACGCGCTGATCGGCCCGAACGGCGCCGGCAAGACCACCTTCA TCAACCTGCTGACCGGCGCCTTCGCACCCACCGCCGGCCAGGTGCGGCTGGACGGCGACGACATCACGCGCCTGAGCGCG CACCAGCGCGTCAAGCGCGGCATCACCCGCACCTTCCAGATCAACACGCTGTTCCCGGGGCTGACCGTGCTGGAATCGGT GATGCTGGCCATCTTCGAGCGCACCGGCGCGTCCTGGCACTGGCACCGCACCGTGGCGGCGCACACGGCGGCGCGCGACG AGGCGATGGCGCTGCTCGGCCGCCTGCAGCTCGGCGCGGATGCGTCATCGCCCACGCACGCCTTGCCCTACGGCAAGCAG CGTCTGCTGGAGATCGCGCTGGCGCTGGCGACGCTGCCGCGCATCCTGCTGCTCGACGAGCCCGCCGCCGGCATCCCGGC CGGGGAGAGCGCCGAGCTGTTCGAGGTGATCGCCGGCCTGCCGCGCGACATCACCATCCTTTTCATCGAGCACGACATGA ACCTGGTGTTCCGCTTCGCCGAGCGGATCAGCGTGCTGGTGGCCGGCCGCGTGCTGACCGAAGGCACGCCGCAAGAGATC GCCGCCGACCCGCGCGTGCGCGAGGTCTACCTCGGGGAGGCCGCGCATGGCTGA
Upstream 100 bases:
>100_bases GCCTGCTGCTGATGGCGATCGTGCTGTTCGCGCGCGGCGGCATTCTGGGCGGGCTGGAGGCGGCGATGCGCGCCTGGCGC GCGCGCAGGGGAGGGCCGGC
Downstream 100 bases:
>100_bases ACTGCTGTCGTTGGAGCGCGTGACCGCCGGCTACGGCAACGCCGTCGTGCTGGACGACGTGTCGTTCGGCCTCGACGCTG GCGGCAGCCTCGCGCTGCTG
Product: ABC transporter ATP-binding protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNAPSMPPAPTLSTHGLSKRWGGFHANADISLTFAPGAHHALIGPNGAGKTTFINLLTGAFAPTAGQVRLDGDDITRLSA HQRVKRGITRTFQINTLFPGLTVLESVMLAIFERTGASWHWHRTVAAHTAARDEAMALLGRLQLGADASSPTHALPYGKQ RLLEIALALATLPRILLLDEPAAGIPAGESAELFEVIAGLPRDITILFIEHDMNLVFRFAERISVLVAGRVLTEGTPQEI AADPRVREVYLGEAAHG
Sequences:
>Translated_257_residues MNAPSMPPAPTLSTHGLSKRWGGFHANADISLTFAPGAHHALIGPNGAGKTTFINLLTGAFAPTAGQVRLDGDDITRLSA HQRVKRGITRTFQINTLFPGLTVLESVMLAIFERTGASWHWHRTVAAHTAARDEAMALLGRLQLGADASSPTHALPYGKQ RLLEIALALATLPRILLLDEPAAGIPAGESAELFEVIAGLPRDITILFIEHDMNLVFRFAERISVLVAGRVLTEGTPQEI AADPRVREVYLGEAAHG >Mature_257_residues MNAPSMPPAPTLSTHGLSKRWGGFHANADISLTFAPGAHHALIGPNGAGKTTFINLLTGAFAPTAGQVRLDGDDITRLSA HQRVKRGITRTFQINTLFPGLTVLESVMLAIFERTGASWHWHRTVAAHTAARDEAMALLGRLQLGADASSPTHALPYGKQ RLLEIALALATLPRILLLDEPAAGIPAGESAELFEVIAGLPRDITILFIEHDMNLVFRFAERISVLVAGRVLTEGTPQEI AADPRVREVYLGEAAHG
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI31657092, Length=230, Percent_Identity=29.1304347826087, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI27881501, Length=242, Percent_Identity=28.5123966942149, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI30795238, Length=242, Percent_Identity=28.5123966942149, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI21536376, Length=213, Percent_Identity=30.5164319248826, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI150417984, Length=236, Percent_Identity=30.5084745762712, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI105990541, Length=209, Percent_Identity=31.1004784688995, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI45446740, Length=209, Percent_Identity=28.7081339712919, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI47078218, Length=209, Percent_Identity=28.7081339712919, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI27262624, Length=220, Percent_Identity=30.9090909090909, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI27262626, Length=220, Percent_Identity=30.9090909090909, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI116734710, Length=208, Percent_Identity=28.3653846153846, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI156105685, Length=221, Percent_Identity=31.2217194570136, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI27477115, Length=223, Percent_Identity=27.8026905829596, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI27436953, Length=217, Percent_Identity=27.6497695852535, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI153792144, Length=253, Percent_Identity=25.296442687747, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI11967969, Length=229, Percent_Identity=26.2008733624454, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI21536378, Length=258, Percent_Identity=25.5813953488372, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=42.4603174603175, Blast_Score=171, Evalue=5e-44, Organism=Escherichia coli, GI1787370, Length=239, Percent_Identity=31.3807531380753, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1788210, Length=240, Percent_Identity=31.6666666666667, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI87081791, Length=240, Percent_Identity=31.25, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1789593, Length=245, Percent_Identity=33.469387755102, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789672, Length=254, Percent_Identity=27.1653543307087, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1790525, Length=245, Percent_Identity=28.9795918367347, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI87081709, Length=244, Percent_Identity=29.9180327868852, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1788761, Length=252, Percent_Identity=29.7619047619048, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787792, Length=259, Percent_Identity=27.4131274131274, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1788472, Length=220, Percent_Identity=26.3636363636364, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787029, Length=231, Percent_Identity=28.1385281385281, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1790739, Length=245, Percent_Identity=28.9795918367347, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1789032, Length=240, Percent_Identity=30.8333333333333, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790190, Length=225, Percent_Identity=29.3333333333333, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI48995001, Length=219, Percent_Identity=28.7671232876712, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788897, Length=236, Percent_Identity=30.5084745762712, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1786398, Length=226, Percent_Identity=28.7610619469027, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI87081782, Length=254, Percent_Identity=26.7716535433071, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786803, Length=233, Percent_Identity=30.0429184549356, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786872, Length=242, Percent_Identity=26.4462809917355, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787548, Length=230, Percent_Identity=28.2608695652174, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789991, Length=222, Percent_Identity=27.027027027027, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1788450, Length=231, Percent_Identity=29.004329004329, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790162, Length=251, Percent_Identity=27.0916334661355, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787089, Length=235, Percent_Identity=26.8085106382979, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788225, Length=246, Percent_Identity=27.6422764227642, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787712, Length=231, Percent_Identity=25.5411255411255, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786345, Length=223, Percent_Identity=28.6995515695067, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786253, Length=237, Percent_Identity=28.2700421940928, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1790467, Length=241, Percent_Identity=26.1410788381743, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI48994943, Length=234, Percent_Identity=28.2051282051282, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI87081834, Length=232, Percent_Identity=25.8620689655172, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789873, Length=217, Percent_Identity=29.0322580645161, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1789586, Length=233, Percent_Identity=30.0429184549356, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1786654, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789962, Length=223, Percent_Identity=24.2152466367713, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI48994997, Length=241, Percent_Identity=24.896265560166, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788506, Length=226, Percent_Identity=26.9911504424779, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786703, Length=238, Percent_Identity=27.7310924369748, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787759, Length=256, Percent_Identity=26.171875, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790544, Length=236, Percent_Identity=25.4237288135593, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788644, Length=250, Percent_Identity=26.4, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787758, Length=239, Percent_Identity=23.8493723849372, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789963, Length=252, Percent_Identity=26.5873015873016, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI145693107, Length=233, Percent_Identity=27.4678111587983, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787112, Length=224, Percent_Identity=28.125, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082267, Length=236, Percent_Identity=23.728813559322, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786319, Length=232, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786563, Length=241, Percent_Identity=27.3858921161826, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787041, Length=254, Percent_Identity=28.3464566929134, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787500, Length=222, Percent_Identity=22.972972972973, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17565586, Length=216, Percent_Identity=29.6296296296296, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17565938, Length=213, Percent_Identity=28.169014084507, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17551700, Length=215, Percent_Identity=29.7674418604651, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17551702, Length=215, Percent_Identity=29.7674418604651, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17543740, Length=216, Percent_Identity=27.3148148148148, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533608, Length=230, Percent_Identity=28.2608695652174, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71992290, Length=215, Percent_Identity=27.4418604651163, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193202349, Length=221, Percent_Identity=27.6018099547511, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17510237, Length=224, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71983523, Length=224, Percent_Identity=27.6785714285714, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983516, Length=224, Percent_Identity=27.6785714285714, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983510, Length=224, Percent_Identity=27.6785714285714, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71984940, Length=218, Percent_Identity=29.8165137614679, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI221512771, Length=220, Percent_Identity=29.5454545454545, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI221500365, Length=220, Percent_Identity=29.5454545454545, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI116007184, Length=220, Percent_Identity=29.5454545454545, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24666092, Length=221, Percent_Identity=28.0542986425339, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI24643674, Length=225, Percent_Identity=28, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28573573, Length=217, Percent_Identity=29.0322580645161, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573571, Length=217, Percent_Identity=29.0322580645161, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571209, Length=212, Percent_Identity=27.8301886792453, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581191, Length=210, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581189, Length=210, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581193, Length=210, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581195, Length=210, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24641565, Length=218, Percent_Identity=29.3577981651376, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24648314, Length=225, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI19920532, Length=213, Percent_Identity=26.2910798122066, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24580930, Length=213, Percent_Identity=26.2910798122066, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24659289, Length=203, Percent_Identity=30.0492610837438, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI85724858, Length=206, Percent_Identity=30.5825242718447, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI85724856, Length=206, Percent_Identity=30.5825242718447, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24580547, Length=206, Percent_Identity=30.5825242718447, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24580551, Length=206, Percent_Identity=30.5825242718447, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24580549, Length=206, Percent_Identity=30.5825242718447, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24580545, Length=206, Percent_Identity=30.5825242718447, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27520; Mature: 27520
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPSMPPAPTLSTHGLSKRWGGFHANADISLTFAPGAHHALIGPNGAGKTTFINLLTGA CCCCCCCCCCCCCCCCCCHHCCCEECCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHC FAPTAGQVRLDGDDITRLSAHQRVKRGITRTFQINTLFPGLTVLESVMLAIFERTGASWH CCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEE WHRTVAAHTAARDEAMALLGRLQLGADASSPTHALPYGKQRLLEIALALATLPRILLLDE EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECC PAAGIPAGESAELFEVIAGLPRDITILFIEHDMNLVFRFAERISVLVAGRVLTEGTPQEI CCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHH AADPRVREVYLGEAAHG CCCCCCEEEEECCCCCC >Mature Secondary Structure MNAPSMPPAPTLSTHGLSKRWGGFHANADISLTFAPGAHHALIGPNGAGKTTFINLLTGA CCCCCCCCCCCCCCCCCCHHCCCEECCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHC FAPTAGQVRLDGDDITRLSAHQRVKRGITRTFQINTLFPGLTVLESVMLAIFERTGASWH CCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEE WHRTVAAHTAARDEAMALLGRLQLGADASSPTHALPYGKQRLLEIALALATLPRILLLDE EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECC PAAGIPAGESAELFEVIAGLPRDITILFIEHDMNLVFRFAERISVLVAGRVLTEGTPQEI CCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHH AADPRVREVYLGEAAHG CCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]