Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is pobB [H]
Identifier: 17546961
GI number: 17546961
Start: 2434920
End: 2436152
Strand: Reverse
Name: pobB [H]
Synonym: RSc2242
Alternate gene names: 17546961
Gene position: 2436152-2434920 (Counterclockwise)
Preceding gene: 17546964
Following gene: 17546959
Centisome position: 65.55
GC content: 68.94
Gene sequence:
>1233_bases ATGCGTACCCAGGTCGCCATCATCGGCGCCGGCCCCGCCGGCCTGCTGCTCGGACAGCTGCTGCAGCGCAGCGGCATCGA CGCCGTCATCCTCGAAACCAGGAGCCGCCAGTACGTCGAAGAGCGCATCCGCGCGGGCGTGCTGGAGCAGGGCACGGTCG ACACGCTCAACGAGGCGGGCGTCGGCGAGCGCATGCGTCGCGAGGGCCTGGTGCATCACGGCATCGACCTGCTGTTCGAA GGCAAGCGCCACCGCCTCGACCTCACGGCCCTGTCGGGCGGCCGCTCCATCACCGTGTACGGCCAGCACGAGGTGGTGAA GGACCTGATCGCCGCGCGCATCGGCCAGGGCGCGCCGCTGCTGTTCGAGGTGTCGGAGGTGTCGCTGCACGACCTCGAAT CGGCCACGCCGTCGGTGCGTTTCGTGCACGAGGGCGTGCCGCAGACCTTGCACTGCGACTACATCGCCGGCTGCGACGGC TTCCACGGCATCTGCCGGCCGGCGATCCCGGCGCAGCGGCAGGCGGTGTTCGAGCGCGTCTATCCGTTCGCGTGGCTGGG CATCCTGGCCGAGGCGGCGCCCGCGGCCGACGAGCTGATCTACGCCAGCCACGCGCGCGGCTTCGCGCTGTTCAGCATGC GCTCACCGAAGATCACGCGGCTGTACCTGCAATGCAAGCCGGACGAGAACCTCGCCGAATGGTCCGATGCGCGCATCTGG GACGAACTCCACACGCGCCTGGAAAACAACGATGGCTGGCACCTGAAGGAAGGCCCGATCCTGCAGAAGAGCGTGACGCC GATGCGCAGCTTCGTCTGCGAGACGATGCGGCACGGGCGCCTGTTCCTGGCGGGCGATGCGGCGCACATCGTGCCGCCCA CCGGCGCCAAGGGCATGAACCTGGCGGTGGCCGACGTGCGCGTGCTGGCCCAGGCGCTCACCGCGCGCTACCGGCAGAAC GACACGGCGCAACTGGACGGCTACGCCGAGCGCTGCCTGCAACGCATCTGGCGCGCCGAGCATTTCTCGTGGTGGATGAC GTCGATGCTGCATCGCTTCGACGACCACACCCCGTTCATGCAGAGGCTGCAGCACGCCGAGCTGGAGTACTTGACGACCT CGCTGGCCGCGGCACGCACGTTGGCCGAGAACTACGTCGGCCTGCCGTTTGCCGATGCACCGGCGAGGGCACTGAACACC GTCGGCAACGTCAGTAGTTCCAGGGCGGCGTAG
Upstream 100 bases:
>100_bases ATTTGCGATAGAGATTATCGGCGATATTGCATTGTCCGATATCAACCGCTGTGCCGACAATGCTTGCAGAACGATTCCAA TCCTTGCGGAGACAACCACC
Downstream 100 bases:
>100_bases TCGTCGGCTTGGACAGCGAGACGCGCGAGACCAGCGGGCGGAAGCCCAGGCTGCGCGAGGTGGTGTACACCGTCCGCGGG TTCGGGGACGTCAGCGCGTA
Product: 4-hydroxybenzoate 3-monooxygenase
Products: NA
Alternate protein names: PHBH; 4-hydroxybenzoate 3-monooxygenase [H]
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MRTQVAIIGAGPAGLLLGQLLQRSGIDAVILETRSRQYVEERIRAGVLEQGTVDTLNEAGVGERMRREGLVHHGIDLLFE GKRHRLDLTALSGGRSITVYGQHEVVKDLIAARIGQGAPLLFEVSEVSLHDLESATPSVRFVHEGVPQTLHCDYIAGCDG FHGICRPAIPAQRQAVFERVYPFAWLGILAEAAPAADELIYASHARGFALFSMRSPKITRLYLQCKPDENLAEWSDARIW DELHTRLENNDGWHLKEGPILQKSVTPMRSFVCETMRHGRLFLAGDAAHIVPPTGAKGMNLAVADVRVLAQALTARYRQN DTAQLDGYAERCLQRIWRAEHFSWWMTSMLHRFDDHTPFMQRLQHAELEYLTTSLAAARTLAENYVGLPFADAPARALNT VGNVSSSRAA
Sequences:
>Translated_410_residues MRTQVAIIGAGPAGLLLGQLLQRSGIDAVILETRSRQYVEERIRAGVLEQGTVDTLNEAGVGERMRREGLVHHGIDLLFE GKRHRLDLTALSGGRSITVYGQHEVVKDLIAARIGQGAPLLFEVSEVSLHDLESATPSVRFVHEGVPQTLHCDYIAGCDG FHGICRPAIPAQRQAVFERVYPFAWLGILAEAAPAADELIYASHARGFALFSMRSPKITRLYLQCKPDENLAEWSDARIW DELHTRLENNDGWHLKEGPILQKSVTPMRSFVCETMRHGRLFLAGDAAHIVPPTGAKGMNLAVADVRVLAQALTARYRQN DTAQLDGYAERCLQRIWRAEHFSWWMTSMLHRFDDHTPFMQRLQHAELEYLTTSLAAARTLAENYVGLPFADAPARALNT VGNVSSSRAA >Mature_410_residues MRTQVAIIGAGPAGLLLGQLLQRSGIDAVILETRSRQYVEERIRAGVLEQGTVDTLNEAGVGERMRREGLVHHGIDLLFE GKRHRLDLTALSGGRSITVYGQHEVVKDLIAARIGQGAPLLFEVSEVSLHDLESATPSVRFVHEGVPQTLHCDYIAGCDG FHGICRPAIPAQRQAVFERVYPFAWLGILAEAAPAADELIYASHARGFALFSMRSPKITRLYLQCKPDENLAEWSDARIW DELHTRLENNDGWHLKEGPILQKSVTPMRSFVCETMRHGRLFLAGDAAHIVPPTGAKGMNLAVADVRVLAQALTARYRQN DTAQLDGYAERCLQRIWRAEHFSWWMTSMLHRFDDHTPFMQRLQHAELEYLTTSLAAARTLAENYVGLPFADAPARALNT VGNVSSSRAA
Specific function: Unknown
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012733 - InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.2 [H]
Molecular weight: Translated: 45544; Mature: 45544
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTQVAIIGAGPAGLLLGQLLQRSGIDAVILETRSRQYVEERIRAGVLEQGTVDTLNEAG CCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHCC VGERMRREGLVHHGIDLLFEGKRHRLDLTALSGGRSITVYGQHEVVKDLIAARIGQGAPL CHHHHHHCCHHHHCHHHEECCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCE LFEVSEVSLHDLESATPSVRFVHEGVPQTLHCDYIAGCDGFHGICRPAIPAQRQAVFERV EEEECHHHHHHHHCCCCCEEEHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHH YPFAWLGILAEAAPAADELIYASHARGFALFSMRSPKITRLYLQCKPDENLAEWSDARIW HHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHH DELHTRLENNDGWHLKEGPILQKSVTPMRSFVCETMRHGRLFLAGDAAHIVPPTGAKGMN HHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCE LAVADVRVLAQALTARYRQNDTAQLDGYAERCLQRIWRAEHFSWWMTSMLHRFDDHTPFM EHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QRLQHAELEYLTTSLAAARTLAENYVGLPFADAPARALNTVGNVSSSRAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure MRTQVAIIGAGPAGLLLGQLLQRSGIDAVILETRSRQYVEERIRAGVLEQGTVDTLNEAG CCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHCC VGERMRREGLVHHGIDLLFEGKRHRLDLTALSGGRSITVYGQHEVVKDLIAARIGQGAPL CHHHHHHCCHHHHCHHHEECCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCE LFEVSEVSLHDLESATPSVRFVHEGVPQTLHCDYIAGCDGFHGICRPAIPAQRQAVFERV EEEECHHHHHHHHCCCCCEEEHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHH YPFAWLGILAEAAPAADELIYASHARGFALFSMRSPKITRLYLQCKPDENLAEWSDARIW HHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHH DELHTRLENNDGWHLKEGPILQKSVTPMRSFVCETMRHGRLFLAGDAAHIVPPTGAKGMN HHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCE LAVADVRVLAQALTARYRQNDTAQLDGYAERCLQRIWRAEHFSWWMTSMLHRFDDHTPFM EHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QRLQHAELEYLTTSLAAARTLAENYVGLPFADAPARALNTVGNVSSSRAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2465205; 10984043; 7939628; 8555229; 8312276 [H]