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The map label for this gene is infA2 [H]

Identifier: 17546958

GI number: 17546958

Start: 2432612

End: 2432830

Strand: Reverse

Name: infA2 [H]

Synonym: RSc2239

Alternate gene names: 17546958

Gene position: 2432830-2432612 (Counterclockwise)

Preceding gene: 17546959

Following gene: 17546957

Centisome position: 65.46

GC content: 59.82

Gene sequence:

>219_bases
TTGGCCAAGGAAGAACTGATCGAATTTGAGGGGGTGGTCTCCGAAGCGCTGCCCGACAACCGTTTTCGCGTGCAGCTGGA
AAACGGCGTGGAAGTCTGGGCCTACGCGTCCGGCAAGATGCAGAAGCACCGCATCCGCATCCTCGCGGGCGACCGCGTGA
AGCTGGAGATGTCGCCGTACGACCTGACCAAAGGGCGGATCAACTACCGCCACAAATAA

Upstream 100 bases:

>100_bases
GCGCCCGCATCCCTGCATGCGGGGCAAGGTGCCGGGGAGGGTCTCTCGCCATTGCAACCATTGACGCAGCCGCGTGCTGC
AACGATACAAAGGAACGAGT

Downstream 100 bases:

>100_bases
GGCCCGGTGTCGACCATCGGCCATATCAGAGACCGCGAGACACCGTCCGCGGTTTTTTTATGTGCCTGGGCAATACACGA
AAACGTTTTGTAAAGCAACC

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MAKEELIEFEGVVSEALPDNRFRVQLENGVEVWAYASGKMQKHRIRILAGDRVKLEMSPYDLTKGRINYRHK

Sequences:

>Translated_72_residues
MAKEELIEFEGVVSEALPDNRFRVQLENGVEVWAYASGKMQKHRIRILAGDRVKLEMSPYDLTKGRINYRHK
>Mature_71_residues
AKEELIEFEGVVSEALPDNRFRVQLENGVEVWAYASGKMQKHRIRILAGDRVKLEMSPYDLTKGRINYRHK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=58.3333333333333, Blast_Score=90, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 8419; Mature: 8288

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEELIEFEGVVSEALPDNRFRVQLENGVEVWAYASGKMQKHRIRILAGDRVKLEMSPY
CCHHHHHHHHCHHHHCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCEEEEEECCC
DLTKGRINYRHK
CCCCCEEEECCC
>Mature Secondary Structure 
AKEELIEFEGVVSEALPDNRFRVQLENGVEVWAYASGKMQKHRIRILAGDRVKLEMSPY
CHHHHHHHHCHHHHCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCEEEEEECCC
DLTKGRINYRHK
CCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA