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The map label for this gene is 17546403

Identifier: 17546403

GI number: 17546403

Start: 1802822

End: 1804060

Strand: Direct

Name: 17546403

Synonym: RSc1684

Alternate gene names: NA

Gene position: 1802822-1804060 (Clockwise)

Preceding gene: 17546402

Following gene: 17546404

Centisome position: 48.51

GC content: 65.54

Gene sequence:

>1239_bases
ATGACCCTGGCTGAACTGAAGCAGAAGCGTGCAAAGATCGCTGCCGAAATGCGCTCGCTGAACGACAACATTGGCGAGGT
CGCCTGGAACGATGAACAGCGCTCGCGCTGGGATGCCATGCGCGCGGATCTCAAGAAGCTCGACGAGCAGATCGAGCGCG
AGGAAGAACTGCGCAGCGCGGAGCAGCGCTACGTCGAGAGCAACGCGGACGACCTGGCTAGGCAGGCGCGGCAGGCTGCG
GCTGCTGCCACCGGCGGGACAACGGACGACGAGCGCCGTGCCGCGGCTTTTGGGCGCTTCCTGCGCGAAGGCCTCGGCGA
GCTGTCCGCCGAAGAGCGCAGGGCGCTGCAGGAACTGCGCGCGCAGAGTGCCGGCGTGCCGGACAAGGGCGGCTACACCG
TGCCCCGCACCTTCCTGGCCAAGGTGGTCGAGCAACTGGTGACCTACGGCGGCATGGCCAGCGTCATGCAGAATCTGACT
ACGGACGGCGGCGAGCCGATCGACTGGCCGGTGGCGCTGGGCGTGGCGGAGGAGGGCGAACTCCTCGGCGAAGGCGAGGC
GACAGGCGAAGACGACATCGATTTCGGCATCGGAACCCTTGGCGCTCACAAGCTCTCGTCGAAGGTGGTCCGTGTCAGCG
AGGAACTGCTCAGCGACTCGTCCGTCGACATCGAAGCGTTCCTGGCCGGTCGCATCGCCGCGCGCATCGGCCGTGCGGAA
TCTCGCCTGGTGGTGCAGGGGACGGGCGACGGCAAGCCGCAGCAGCCGCAGGGGCTGGCCGCATCCGTGACTCTCACCAA
GAGCACGGCGAATGCCGCGAAGCTGACCTGGCAGGAGGTCAACACCCTGATTCACGCCGTGGATCCGGCTTACCGGAATG
CGCCCATGTATCGCCTGGCCTTCAACGATCAGACGTTGAAGGTGCTTGAGGAGTTGGTCGACGGCAACGGTCGCCCGCTG
TGGCTGCCGGGCCTGGAATCGTCCGCGCCGCCGACGATTCTCAAGCGGCAATACGTGATCGACCAAGCGATCGATGATAT
CGGCGCCGGCAAGAAATTCATGTATGGCGGCGACTTCAACCAGTTCATTCTGCGGCGTGTGCGGTCCATGGCGATCAAGC
GACTGGTCGAGCGCTACGCGGAATACGGCCAGGTCGGCTTCCTGGCCTTCCACCGCTTCGGTTGCGTGCTGCAGGACACG
TCCGCAATTGCGGCGCTGGTCGGCAAGCCGGCTGTGTAA

Upstream 100 bases:

>100_bases
TGGCGGCAGGCGCGCGACGACAAGGCTCACGTCGCGGCAATCAATCAGCGTCGCGCACGCGAACGCTTCCTTGAACTCCT
CAACATTTAATGGAGATGGT

Downstream 100 bases:

>100_bases
TGGGGTGGGCCGCGAGAGCGGCCCGCTGCTCACATGATCGAGATTTCCGAGATCCGCGAGCAGCTGCGCGTCGAGCCGGA
GGAAACGGACGATGCGCTGC

Product: phage phi-C31 GP36-like protein

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein; HK97 Family Capsid Protein; Capsid Protein; Phage Capsid Protein HK; Phage Prohead Protease; Prophage; Capsid; Capsid-Like Protein

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTLAELKQKRAKIAAEMRSLNDNIGEVAWNDEQRSRWDAMRADLKKLDEQIEREEELRSAEQRYVESNADDLARQARQAA
AAATGGTTDDERRAAAFGRFLREGLGELSAEERRALQELRAQSAGVPDKGGYTVPRTFLAKVVEQLVTYGGMASVMQNLT
TDGGEPIDWPVALGVAEEGELLGEGEATGEDDIDFGIGTLGAHKLSSKVVRVSEELLSDSSVDIEAFLAGRIAARIGRAE
SRLVVQGTGDGKPQQPQGLAASVTLTKSTANAAKLTWQEVNTLIHAVDPAYRNAPMYRLAFNDQTLKVLEELVDGNGRPL
WLPGLESSAPPTILKRQYVIDQAIDDIGAGKKFMYGGDFNQFILRRVRSMAIKRLVERYAEYGQVGFLAFHRFGCVLQDT
SAIAALVGKPAV

Sequences:

>Translated_412_residues
MTLAELKQKRAKIAAEMRSLNDNIGEVAWNDEQRSRWDAMRADLKKLDEQIEREEELRSAEQRYVESNADDLARQARQAA
AAATGGTTDDERRAAAFGRFLREGLGELSAEERRALQELRAQSAGVPDKGGYTVPRTFLAKVVEQLVTYGGMASVMQNLT
TDGGEPIDWPVALGVAEEGELLGEGEATGEDDIDFGIGTLGAHKLSSKVVRVSEELLSDSSVDIEAFLAGRIAARIGRAE
SRLVVQGTGDGKPQQPQGLAASVTLTKSTANAAKLTWQEVNTLIHAVDPAYRNAPMYRLAFNDQTLKVLEELVDGNGRPL
WLPGLESSAPPTILKRQYVIDQAIDDIGAGKKFMYGGDFNQFILRRVRSMAIKRLVERYAEYGQVGFLAFHRFGCVLQDT
SAIAALVGKPAV
>Mature_411_residues
TLAELKQKRAKIAAEMRSLNDNIGEVAWNDEQRSRWDAMRADLKKLDEQIEREEELRSAEQRYVESNADDLARQARQAAA
AATGGTTDDERRAAAFGRFLREGLGELSAEERRALQELRAQSAGVPDKGGYTVPRTFLAKVVEQLVTYGGMASVMQNLTT
DGGEPIDWPVALGVAEEGELLGEGEATGEDDIDFGIGTLGAHKLSSKVVRVSEELLSDSSVDIEAFLAGRIAARIGRAES
RLVVQGTGDGKPQQPQGLAASVTLTKSTANAAKLTWQEVNTLIHAVDPAYRNAPMYRLAFNDQTLKVLEELVDGNGRPLW
LPGLESSAPPTILKRQYVIDQAIDDIGAGKKFMYGGDFNQFILRRVRSMAIKRLVERYAEYGQVGFLAFHRFGCVLQDTS
AIAALVGKPAV

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44967; Mature: 44836

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAELKQKRAKIAAEMRSLNDNIGEVAWNDEQRSRWDAMRADLKKLDEQIEREEELRSA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQRYVESNADDLARQARQAAAAATGGTTDDERRAAAFGRFLREGLGELSAEERRALQELR
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AQSAGVPDKGGYTVPRTFLAKVVEQLVTYGGMASVMQNLTTDGGEPIDWPVALGVAEEGE
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEECCCCCCC
LLGEGEATGEDDIDFGIGTLGAHKLSSKVVRVSEELLSDSSVDIEAFLAGRIAARIGRAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
SRLVVQGTGDGKPQQPQGLAASVTLTKSTANAAKLTWQEVNTLIHAVDPAYRNAPMYRLA
CEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHCCCEEEEE
FNDQTLKVLEELVDGNGRPLWLPGLESSAPPTILKRQYVIDQAIDDIGAGKKFMYGGDFN
ECCHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHH
QFILRRVRSMAIKRLVERYAEYGQVGFLAFHRFGCVLQDTSAIAALVGKPAV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLAELKQKRAKIAAEMRSLNDNIGEVAWNDEQRSRWDAMRADLKKLDEQIEREEELRSA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQRYVESNADDLARQARQAAAAATGGTTDDERRAAAFGRFLREGLGELSAEERRALQELR
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AQSAGVPDKGGYTVPRTFLAKVVEQLVTYGGMASVMQNLTTDGGEPIDWPVALGVAEEGE
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEECCCCCCC
LLGEGEATGEDDIDFGIGTLGAHKLSSKVVRVSEELLSDSSVDIEAFLAGRIAARIGRAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
SRLVVQGTGDGKPQQPQGLAASVTLTKSTANAAKLTWQEVNTLIHAVDPAYRNAPMYRLA
CEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHCCCEEEEE
FNDQTLKVLEELVDGNGRPLWLPGLESSAPPTILKRQYVIDQAIDDIGAGKKFMYGGDFN
ECCHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCHH
QFILRRVRSMAIKRLVERYAEYGQVGFLAFHRFGCVLQDTSAIAALVGKPAV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA