Click here to switch to the map view.

The map label for this gene is 17546333

Identifier: 17546333

GI number: 17546333

Start: 1734665

End: 1734979

Strand: Direct

Name: 17546333

Synonym: RSc1614

Alternate gene names: NA

Gene position: 1734665-1734979 (Clockwise)

Preceding gene: 17546332

Following gene: 17546334

Centisome position: 46.68

GC content: 62.54

Gene sequence:

>315_bases
ATGAACGAAACCGCTCGCGAAATCATGCTCTACGACGCCCACAAGAAAAGCGCGGGTGTCGCGTTCCTGTGGTGGTTCCT
CCTGGGGTTCCTGGGGGCGCATCGCTTCTATGTGAACCGGGTCGGGAGTGCCGTCGCCCAGGCCATCGCCAATGTCGGCG
GTACATGGCTGGTGATCCTGGATAGCGGCAATACGGCGGGTTGGGTGCTCGGCGTGCTTGGCGGGCTGTGGGTGCTGGTG
GACCTGTTCCTGATTCCCGGCATGGTCCGCGCATATAACACGATGCTTGCCGAGCGGCTGTCGGCTGCCTCTTGA

Upstream 100 bases:

>100_bases
CGACAAGGCCGAGGCGGCGCTCGCCCGGATGTAATCGATGCAAGACCCGGAACGTGGCCATCTTGCCGTGGTCTGATGCA
CATTGACCTGACGTCCTGCC

Downstream 100 bases:

>100_bases
TTGGAGCACGGATGCCATGCACTTGAAGACATGGTGCGCGCGAGCCGCGCTGTGGATGGCGGGCCTGGCCTGTGTCGGCG
TGGGCCTGACGGGCTGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: TM2 Domain Containing Protein

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNETAREIMLYDAHKKSAGVAFLWWFLLGFLGAHRFYVNRVGSAVAQAIANVGGTWLVILDSGNTAGWVLGVLGGLWVLV
DLFLIPGMVRAYNTMLAERLSAAS

Sequences:

>Translated_104_residues
MNETAREIMLYDAHKKSAGVAFLWWFLLGFLGAHRFYVNRVGSAVAQAIANVGGTWLVILDSGNTAGWVLGVLGGLWVLV
DLFLIPGMVRAYNTMLAERLSAAS
>Mature_104_residues
MNETAREIMLYDAHKKSAGVAFLWWFLLGFLGAHRFYVNRVGSAVAQAIANVGGTWLVILDSGNTAGWVLGVLGGLWVLV
DLFLIPGMVRAYNTMLAERLSAAS

Specific function: Unknown

COG id: COG2314

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11299; Mature: 11299

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETAREIMLYDAHKKSAGVAFLWWFLLGFLGAHRFYVNRVGSAVAQAIANVGGTWLVIL
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
DSGNTAGWVLGVLGGLWVLVDLFLIPGMVRAYNTMLAERLSAAS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNETAREIMLYDAHKKSAGVAFLWWFLLGFLGAHRFYVNRVGSAVAQAIANVGGTWLVIL
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
DSGNTAGWVLGVLGGLWVLVDLFLIPGMVRAYNTMLAERLSAAS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA