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The map label for this gene is ycgE [C]

Identifier: 17546303

GI number: 17546303

Start: 1699929

End: 1700369

Strand: Direct

Name: ycgE [C]

Synonym: RSc1584

Alternate gene names: 17546303

Gene position: 1699929-1700369 (Clockwise)

Preceding gene: 17546302

Following gene: 17546305

Centisome position: 45.74

GC content: 64.63

Gene sequence:

>441_bases
ATGGTCGCCGATAAACACACGGAGCGGATCAATCTGCCGCCGATTCCTGCCAAGCGCTACTTCACCATCGGTGAGGTGAG
CGACCTGTGCGCGGTGAAGCCGCACGTGCTGCGCTATTGGGAGCAGGAGTTCACGCAGCTCAAGCCGGTCAAGCGGCGCG
GCAACCGGCGCTATTACCAGCACCACGAGGTCCTGCTGATCCGCCGTATCCGCGAGCTGCTGTACGAGCAGGGCTTCACG
ATCAACGGGGCGCGCAATCGGTTGGATGAGCTGCGGCATGGCGGAGGCAGTGCTCCGGCCGAAGCGCCTGAAGCACCGGC
CGAGATTGTCGCTGCGACTGCCGAGCCCGTGGCGGCTGCCAGCAGTGGCACCATCGACGTGCCCGCGTTGCGCCTCGCGC
TGCAAGCGGTGCTGGATATCTTGCAGGCGAGCAAATCGTAA

Upstream 100 bases:

>100_bases
CACCTTCCACGCGAGCCAGAAGCTCAAGGCGCTCGTCGAGGAGCGCGTCGAGCCGATGCCCGCCAGCGCTGCGTAATTTC
GCGTCTTCGCTTGCGCCACC

Downstream 100 bases:

>100_bases
GGGTTGTTGCGACCCACTAGTCACGGACGATATCACTCTGTTATACTTTCACGCTTTCGGGGCGTAGCGCAGCCTGGTAG
CGTACCTGCATGGGGTGCAG

Product: transcription regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; Regulatory Protein MerR; MerR Family Regulatory Protein; MerR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MerR Family; MerR Family Regulatory Family; Transcriptional Regulator Protein; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MVADKHTERINLPPIPAKRYFTIGEVSDLCAVKPHVLRYWEQEFTQLKPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFT
INGARNRLDELRHGGGSAPAEAPEAPAEIVAATAEPVAAASSGTIDVPALRLALQAVLDILQASKS

Sequences:

>Translated_146_residues
MVADKHTERINLPPIPAKRYFTIGEVSDLCAVKPHVLRYWEQEFTQLKPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFT
INGARNRLDELRHGGGSAPAEAPEAPAEIVAATAEPVAAASSGTIDVPALRLALQAVLDILQASKS
>Mature_146_residues
MVADKHTERINLPPIPAKRYFTIGEVSDLCAVKPHVLRYWEQEFTQLKPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFT
INGARNRLDELRHGGGSAPAEAPEAPAEIVAATAEPVAAASSGTIDVPALRLALQAVLDILQASKS

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16302; Mature: 16302

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVADKHTERINLPPIPAKRYFTIGEVSDLCAVKPHVLRYWEQEFTQLKPVKRRGNRRYYQ
CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
HHEVLLIRRIRELLYEQGFTINGARNRLDELRHGGGSAPAEAPEAPAEIVAATAEPVAAA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHCC
SSGTIDVPALRLALQAVLDILQASKS
CCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVADKHTERINLPPIPAKRYFTIGEVSDLCAVKPHVLRYWEQEFTQLKPVKRRGNRRYYQ
CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
HHEVLLIRRIRELLYEQGFTINGARNRLDELRHGGGSAPAEAPEAPAEIVAATAEPVAAA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHCC
SSGTIDVPALRLALQAVLDILQASKS
CCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA