Click here to switch to the map view.

The map label for this gene is yclJ [H]

Identifier: 17545795

GI number: 17545795

Start: 1132509

End: 1133264

Strand: Direct

Name: yclJ [H]

Synonym: RSc1076

Alternate gene names: 17545795

Gene position: 1132509-1133264 (Clockwise)

Preceding gene: 17545794

Following gene: 17545796

Centisome position: 30.47

GC content: 64.29

Gene sequence:

>756_bases
ATGTCCGGACGCACAACGGAATCCCCAGCAATGAAAATCGGTTTGATCGACGCACATCTCGCACGCCTGCAGACGATCCA
CACGGCGCTGCGTCCGACACGGTTCGAATGCGTGCCGCTGTTCCTGTCGCGCCAGGTTTTCGAGGCCATCGACGAGAGCG
GCATCAATCTCCTGATGGTCGGGGCACATGCGCACGACATGCCCGGGCTGTCGCTGGTGCGCAGCGTGCGCGAGCGCGTC
GGCTCGGGTATGGCCATCGTCTACCTGGGCGACGGCCGGGCCGATACCGAGACCACCGATGCGCTCAACCATGGCGCCGA
CCTGTGCTTCCAGGGCGAGATCCGTCCGCCGGAACTGGTTGCGCGGCTCGACGCGCTGATCCGCCGCGTCGCCGTCAGCC
GCGCCGTGCGCGCTGCCGAGATCAAGCTGGGCCATTACACCGTGGACCGGCAGAACCGCTCGATCCATCTGCGCGAGACG
CCGCTGTCGGTGCATGCCCGCGAGTTCGAGCTTGCGCTGCTGCTGTTCGCCAATGTTGGCCGCATCCTGACGCGCACGGA
TATCGAATTGGCTTTGTGGGGACGCGAATTGAGTCCATACTCGAGAACATTGGATACGCATGTTTCGCGTTTGCGCAAGA
AGCTGTTGCTGACGCCGGAGAACGGCCTGCGGCTGCGCGCGATCTACGGGCACGGCTTCTGCCTGGAGCGCGTAATGGAT
ACGGTGCCTGCGGCCGAACTGTCGCAGGTGTTCTGA

Upstream 100 bases:

>100_bases
TGCGCGGCGACGGGAATCCGCCGGGGGATGCATGGGTCTTGCGGGCCGGTTGGTGCTTGTTGGCGTCGTGCGACGCGGGA
TCGCCCGCGTGCATGGCGGC

Downstream 100 bases:

>100_bases
CGATTTCTCCACCCTGTGTCATCTGCCACCATGCACATCCTCATCACCATCCTCATCGGCTTCCTGGCCGGCCTGGTCGC
ACGCTGGATCACGCCGGGCA

Product: two-component system response regulator transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGRTTESPAMKIGLIDAHLARLQTIHTALRPTRFECVPLFLSRQVFEAIDESGINLLMVGAHAHDMPGLSLVRSVRERV
GSGMAIVYLGDGRADTETTDALNHGADLCFQGEIRPPELVARLDALIRRVAVSRAVRAAEIKLGHYTVDRQNRSIHLRET
PLSVHAREFELALLLFANVGRILTRTDIELALWGRELSPYSRTLDTHVSRLRKKLLLTPENGLRLRAIYGHGFCLERVMD
TVPAAELSQVF

Sequences:

>Translated_251_residues
MSGRTTESPAMKIGLIDAHLARLQTIHTALRPTRFECVPLFLSRQVFEAIDESGINLLMVGAHAHDMPGLSLVRSVRERV
GSGMAIVYLGDGRADTETTDALNHGADLCFQGEIRPPELVARLDALIRRVAVSRAVRAAEIKLGHYTVDRQNRSIHLRET
PLSVHAREFELALLLFANVGRILTRTDIELALWGRELSPYSRTLDTHVSRLRKKLLLTPENGLRLRAIYGHGFCLERVMD
TVPAAELSQVF
>Mature_250_residues
SGRTTESPAMKIGLIDAHLARLQTIHTALRPTRFECVPLFLSRQVFEAIDESGINLLMVGAHAHDMPGLSLVRSVRERVG
SGMAIVYLGDGRADTETTDALNHGADLCFQGEIRPPELVARLDALIRRVAVSRAVRAAEIKLGHYTVDRQNRSIHLRETP
LSVHAREFELALLLFANVGRILTRTDIELALWGRELSPYSRTLDTHVSRLRKKLLLTPENGLRLRAIYGHGFCLERVMDT
VPAAELSQVF

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=225, Percent_Identity=28.4444444444444, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790863, Length=207, Percent_Identity=29.4685990338164, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790860, Length=160, Percent_Identity=26.25, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27989; Mature: 27858

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRTTESPAMKIGLIDAHLARLQTIHTALRPTRFECVPLFLSRQVFEAIDESGINLLMV
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
GAHAHDMPGLSLVRSVRERVGSGMAIVYLGDGRADTETTDALNHGADLCFQGEIRPPELV
ECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCHHHH
ARLDALIRRVAVSRAVRAAEIKLGHYTVDRQNRSIHLRETPLSVHAREFELALLLFANVG
HHHHHHHHHHHHHHHHHHHEEEECEEEECCCCCEEEEEECCCEEEHHHHHHHHHHHHHHH
RILTRTDIELALWGRELSPYSRTLDTHVSRLRKKLLLTPENGLRLRAIYGHGFCLERVMD
HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCHHHHHHHH
TVPAAELSQVF
HCCHHHHHHCC
>Mature Secondary Structure 
SGRTTESPAMKIGLIDAHLARLQTIHTALRPTRFECVPLFLSRQVFEAIDESGINLLMV
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
GAHAHDMPGLSLVRSVRERVGSGMAIVYLGDGRADTETTDALNHGADLCFQGEIRPPELV
ECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCHHHH
ARLDALIRRVAVSRAVRAAEIKLGHYTVDRQNRSIHLRETPLSVHAREFELALLLFANVG
HHHHHHHHHHHHHHHHHHHEEEECEEEECCCCCEEEEEECCCEEEHHHHHHHHHHHHHHH
RILTRTDIELALWGRELSPYSRTLDTHVSRLRKKLLLTPENGLRLRAIYGHGFCLERVMD
HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCHHHHHHHH
TVPAAELSQVF
HCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]