Definition | Ralstonia solanacearum GMI1000, complete genome. |
---|---|
Accession | NC_003295 |
Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17545682
Identifier: 17545682
GI number: 17545682
Start: 1011789
End: 1012517
Strand: Direct
Name: 17545682
Synonym: RSc0963
Alternate gene names: NA
Gene position: 1011789-1012517 (Clockwise)
Preceding gene: 17545681
Following gene: 17545683
Centisome position: 27.22
GC content: 64.06
Gene sequence:
>729_bases ATGAAGCAGAACAACACCGTTGCCGCACTGCCCGAAAACCTGCAAGCGGCATTGACGCGCCATCAGGCCGCGCGCGGCAA GTTCGAAGCTGCGCGTGATGAAGCCGACCGCATCGCCGCCGATATGCAGAAGCACCGCACGGCCGCTGACGCATCCGAAA CCGAGGCGCAGCAAGCGCGGCAGGAAGCGGCAAAGCTCATGCGCAGCACCAAGACAGCACCGCAAGACTTGCGCGACCTC AAGGCGAAGGAACGCGCCGCGTACGCCACGGCCGAGGACTACCGCGCCATCGTCGCGGAGTTTGAGGAAGCGCACGTCGA CGCCAAGATCGGGGCGGGCGTTGCCAAGCTAGACGAAAACGCGGCGTATCGGACCGTGCTCCAGACCTACGCCGATACGC TCATGAGCGAGGCTAAGCAAATGTTGGTGCCGCTGTTGCGAGCGATCGCCGTGCAAGAAAGGGCGTACATCAGCGGAGCG ACGCGCGACAACGCCGCCTGGGAATACATGAACGAAAGCGCTGCCGATGCCGCGCTCGCCCGCATGTATGGCGTCATCAA GCAAGCCTTTGAGGCTTTCAAGTTCGACCGCGCGGGCGATGCCGTCCTGCAGGCGGCCATACGACCCGCCGACCTGGACC GGTTCATTCCCTTCAGCCCGGGCGCCATCCATGTTCGAAACACCTTGCGGGCAAAGGCCGCACAACAGCAACGCGGCCGC GCTGCCTAA
Upstream 100 bases:
>100_bases GACTGACCCCCAGCAGCGTTGCATGGGTCGATTCAGAGATCCGGCAATGGATAGCTGCCCGCATCGCGGCCCGTCAATCC TGAGAGACAGAGGACCGACC
Downstream 100 bases:
>100_bases CGACACACAGGAAACCCAAACATGAAGCCCGAACACTGCCCCCAATGCAACGCGCTGACCCCTACTGCGGGAACCGTCAT CCGATCGGATGGCAAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKQNNTVAALPENLQAALTRHQAARGKFEAARDEADRIAADMQKHRTAADASETEAQQARQEAAKLMRSTKTAPQDLRDL KAKERAAYATAEDYRAIVAEFEEAHVDAKIGAGVAKLDENAAYRTVLQTYADTLMSEAKQMLVPLLRAIAVQERAYISGA TRDNAAWEYMNESAADAALARMYGVIKQAFEAFKFDRAGDAVLQAAIRPADLDRFIPFSPGAIHVRNTLRAKAAQQQRGR AA
Sequences:
>Translated_242_residues MKQNNTVAALPENLQAALTRHQAARGKFEAARDEADRIAADMQKHRTAADASETEAQQARQEAAKLMRSTKTAPQDLRDL KAKERAAYATAEDYRAIVAEFEEAHVDAKIGAGVAKLDENAAYRTVLQTYADTLMSEAKQMLVPLLRAIAVQERAYISGA TRDNAAWEYMNESAADAALARMYGVIKQAFEAFKFDRAGDAVLQAAIRPADLDRFIPFSPGAIHVRNTLRAKAAQQQRGR AA >Mature_242_residues MKQNNTVAALPENLQAALTRHQAARGKFEAARDEADRIAADMQKHRTAADASETEAQQARQEAAKLMRSTKTAPQDLRDL KAKERAAYATAEDYRAIVAEFEEAHVDAKIGAGVAKLDENAAYRTVLQTYADTLMSEAKQMLVPLLRAIAVQERAYISGA TRDNAAWEYMNESAADAALARMYGVIKQAFEAFKFDRAGDAVLQAAIRPADLDRFIPFSPGAIHVRNTLRAKAAQQQRGR AA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26549; Mature: 26549
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNNTVAALPENLQAALTRHQAARGKFEAARDEADRIAADMQKHRTAADASETEAQQAR CCCCCCEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QEAAKLMRSTKTAPQDLRDLKAKERAAYATAEDYRAIVAEFEEAHVDAKIGAGVAKLDEN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCH AAYRTVLQTYADTLMSEAKQMLVPLLRAIAVQERAYISGATRDNAAWEYMNESAADAALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RMYGVIKQAFEAFKFDRAGDAVLQAAIRPADLDRFIPFSPGAIHVRNTLRAKAAQQQRGR HHHHHHHHHHHHHHCCCCHHHHHHHHCCHHCHHHCCCCCCCCHHHHHHHHHHHHHHHCCC AA CC >Mature Secondary Structure MKQNNTVAALPENLQAALTRHQAARGKFEAARDEADRIAADMQKHRTAADASETEAQQAR CCCCCCEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QEAAKLMRSTKTAPQDLRDLKAKERAAYATAEDYRAIVAEFEEAHVDAKIGAGVAKLDEN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCH AAYRTVLQTYADTLMSEAKQMLVPLLRAIAVQERAYISGATRDNAAWEYMNESAADAALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RMYGVIKQAFEAFKFDRAGDAVLQAAIRPADLDRFIPFSPGAIHVRNTLRAKAAQQQRGR HHHHHHHHHHHHHHCCCCHHHHHHHHCCHHCHHHCCCCCCCCHHHHHHHHHHHHHHHCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA