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The map label for this gene is nudL [H]

Identifier: 17545656

GI number: 17545656

Start: 986648

End: 987256

Strand: Direct

Name: nudL [H]

Synonym: RSc0937

Alternate gene names: 17545656

Gene position: 986648-987256 (Clockwise)

Preceding gene: 17545655

Following gene: 17545657

Centisome position: 26.55

GC content: 69.13

Gene sequence:

>609_bases
GTGCGGCTGACGCCGGCATTCGTGCGCGAACGCCTGCATGCCCCGCCATCCTGGGTGCCCGAGCATACCGACGAATCCCG
CCTGATCGACACCTCGCTCAAGCTGCGCGAGGCCGCCGTGCTGGTGCCGCTGGTGCAGCGCAGCGCCGGATTGACCGTGC
TGCTGACGCAGCGCAATGCCACCCTCAGCCAGCATGCCGGGCAGATCAGCTTTCCCGGCGGCGGGCGGGAGTCCTCCGAT
CGCGATGCGGTAGACACGGCACTGCGCGAGACGGTGGAGGAGGTCGGCATCGGGGCCGAGCATGTCGAGGTGGTCGGGCG
CCTGCCGGACTACATCACGGGCAGCGGCTTTCATGTGAGTCCGGTCGTGGGCCTGCTGACGCCCGGCTTCATTGCCCGGC
CGGACCCGAGCGAAGTCGCCGAGGTCTTCGAGGTGCCGCTGGCCTTTCTGATGGACCCGGCCAACCACGAAGTGCGCGAG
CTGCGTTGGGATGACCGCGTGCGCTGCTTCTATGCCATGCCGTACCGTCGCCCCGGCGGCGGCCGCTACTTCATCTGGGG
CGCGACCGCCGGGATGCTGCGCAACCTCTATCACTTGCTGGCGGCGTAG

Upstream 100 bases:

>100_bases
TCACCATTCCAGCCCGTTCCCCAAAATGCGCCGTCCCGCATTCGATCCTGAGCAGTTGCCTGTGTTGCCGTCCGCGGCAA
CGCTACCTGCGCTCGGGCCG

Downstream 100 bases:

>100_bases
CGAAAGCAGCACGGTGCGCTGTGATGCGCACGCCCTGTGCTATCGTCTAGCTCATCGCTTCCATGGCGCCCGCGCGCCCC
AGCAACGCCAGTCCAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRLTPAFVRERLHAPPSWVPEHTDESRLIDTSLKLREAAVLVPLVQRSAGLTVLLTQRNATLSQHAGQISFPGGGRESSD
RDAVDTALRETVEEVGIGAEHVEVVGRLPDYITGSGFHVSPVVGLLTPGFIARPDPSEVAEVFEVPLAFLMDPANHEVRE
LRWDDRVRCFYAMPYRRPGGGRYFIWGATAGMLRNLYHLLAA

Sequences:

>Translated_202_residues
MRLTPAFVRERLHAPPSWVPEHTDESRLIDTSLKLREAAVLVPLVQRSAGLTVLLTQRNATLSQHAGQISFPGGGRESSD
RDAVDTALRETVEEVGIGAEHVEVVGRLPDYITGSGFHVSPVVGLLTPGFIARPDPSEVAEVFEVPLAFLMDPANHEVRE
LRWDDRVRCFYAMPYRRPGGGRYFIWGATAGMLRNLYHLLAA
>Mature_202_residues
MRLTPAFVRERLHAPPSWVPEHTDESRLIDTSLKLREAAVLVPLVQRSAGLTVLLTQRNATLSQHAGQISFPGGGRESSD
RDAVDTALRETVEEVGIGAEHVEVVGRLPDYITGSGFHVSPVVGLLTPGFIARPDPSEVAEVFEVPLAFLMDPANHEVRE
LRWDDRVRCFYAMPYRRPGGGRYFIWGATAGMLRNLYHLLAA

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=163, Percent_Identity=36.1963190184049, Blast_Score=100, Evalue=1e-21,
Organism=Escherichia coli, GI1788115, Length=167, Percent_Identity=41.9161676646707, Blast_Score=95, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17536993, Length=120, Percent_Identity=38.3333333333333, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI18859683, Length=205, Percent_Identity=32.1951219512195, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22351; Mature: 22351

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTPAFVRERLHAPPSWVPEHTDESRLIDTSLKLREAAVLVPLVQRSAGLTVLLTQRNA
CCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
TLSQHAGQISFPGGGRESSDRDAVDTALRETVEEVGIGAEHVEVVGRLPDYITGSGFHVS
HHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHCCCCCCHH
PVVGLLTPGFIARPDPSEVAEVFEVPLAFLMDPANHEVRELRWDDRVRCFYAMPYRRPGG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEECCEECCCC
GRYFIWGATAGMLRNLYHLLAA
CEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLTPAFVRERLHAPPSWVPEHTDESRLIDTSLKLREAAVLVPLVQRSAGLTVLLTQRNA
CCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
TLSQHAGQISFPGGGRESSDRDAVDTALRETVEEVGIGAEHVEVVGRLPDYITGSGFHVS
HHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHCCCCCCHH
PVVGLLTPGFIARPDPSEVAEVFEVPLAFLMDPANHEVRELRWDDRVRCFYAMPYRRPGG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEECCEECCCC
GRYFIWGATAGMLRNLYHLLAA
CEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA