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The map label for this gene is 17545647

Identifier: 17545647

GI number: 17545647

Start: 980326

End: 981453

Strand: Direct

Name: 17545647

Synonym: RSc0928

Alternate gene names: NA

Gene position: 980326-981453 (Clockwise)

Preceding gene: 17545646

Following gene: 17545652

Centisome position: 26.38

GC content: 67.55

Gene sequence:

>1128_bases
GTGTCCGATTCATCCGATCGCCATGTTCCGCGCAAGGGGCGTGGCGCCACCTCCAATCTGCAAGGCCGCTTCGAGCGCGA
CGAACGCACCCGCGTCGATGACGGTTGGCAGCCGCTCGTCGGGCAGCAGGATCCGGACGCGCCACCGCGATTGCAGACCA
CCGTCTCCATCGAGCGGGCGCGCTCGATCCTGAGCCGCAACCAGTCCCCGGATATCCCGTTCGGCGTGTCGCTCAACCCG
TACCGGGGTTGCGAGCACGGCTGCATCTACTGCTTCGCGCGCCCGACGCATGCGTATCTGGAACTGTCGCCTGGACTGGA
TTTCGAGACCCGGCTGTTCGCCAAGACCAACGCCGCCGAGCTGCTGCGCGAGACGTTGGCCAAGCCGGGCTACCGCTGCG
AGCCGATCGCGCTGGGCGTCAACACCGATGCCTACCAGCCGATCGAGCGCGAACTGTGCGTCACGCGCGATGTGCTGCAG
GTGCTGCACGATTGCGATCACCCGGTCGGGTTGATCACCAAGTCGACCTTGATCGAACGCGACATCGACCTGCTCGCGCC
GATGGCGGCGAAGCACCTGGCCGTGGCGGCGGTGACCGTCACCACGCTCGATGCCGGGCTGGCGCGCAAGCTGGAGCCGC
GCGCGGCCACGCCGTCGAGGCGTTTGCGCACGATCCGCACGCTGGCCGAAGCGGGGATTCCGGTCGGCGTCAGCGTCGCG
CCGGTCATCCCCTTCATCACCGACGATCACATGGAGCAGATTCTGGAGGCCGCGCGCGAAGCCGGCGCGATGTTCGCCAG
CTATATCGTGCTGCGTCTGCCGCACGAGCTGGATGCGGTGTTCCAGGACTGGCTGGCGGCGCATTTCCCAGACCGTGCGC
AGCGCGTGATGAACCGCATCCGCGACTTGCACGGCGGCCAGGACTACAACCCCGATTTCGGCAACCGCATGCGCGGCACC
GGCATCTGGGCCGACCTGCTGCGCCAGCGTTTCTACAAGGCCGCCGACAGGCTCGGCTTCAGTTACCACCGCTACGACAA
GCTGCGGCTGGACACAGCGCAGTTCAAGCCACCCGCGCGCTCCGTCAAGGCCCGGCCCGTCGACGCGCGGCAGGGCAACC
TGTTCTGA

Upstream 100 bases:

>100_bases
CCGAGGCCGAGGCGAGCCGGCAGCCGCCTTCACGGGTCTGCAGCGGAATGCGGACGAATCGGATACGATCGACACGCCCC
CGCAATCCGCACGTCCCGCT

Downstream 100 bases:

>100_bases
GCTACTGCGACAGTTCCTTCGCGGCCTGCACCTGCGATTCGAAATAGGTCTGGAAGGTGATGGCGAGGCCGGCCATGAGC
AGGCCGGTACCGATCATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSDSSDRHVPRKGRGATSNLQGRFERDERTRVDDGWQPLVGQQDPDAPPRLQTTVSIERARSILSRNQSPDIPFGVSLNP
YRGCEHGCIYCFARPTHAYLELSPGLDFETRLFAKTNAAELLRETLAKPGYRCEPIALGVNTDAYQPIERELCVTRDVLQ
VLHDCDHPVGLITKSTLIERDIDLLAPMAAKHLAVAAVTVTTLDAGLARKLEPRAATPSRRLRTIRTLAEAGIPVGVSVA
PVIPFITDDHMEQILEAAREAGAMFASYIVLRLPHELDAVFQDWLAAHFPDRAQRVMNRIRDLHGGQDYNPDFGNRMRGT
GIWADLLRQRFYKAADRLGFSYHRYDKLRLDTAQFKPPARSVKARPVDARQGNLF

Sequences:

>Translated_375_residues
MSDSSDRHVPRKGRGATSNLQGRFERDERTRVDDGWQPLVGQQDPDAPPRLQTTVSIERARSILSRNQSPDIPFGVSLNP
YRGCEHGCIYCFARPTHAYLELSPGLDFETRLFAKTNAAELLRETLAKPGYRCEPIALGVNTDAYQPIERELCVTRDVLQ
VLHDCDHPVGLITKSTLIERDIDLLAPMAAKHLAVAAVTVTTLDAGLARKLEPRAATPSRRLRTIRTLAEAGIPVGVSVA
PVIPFITDDHMEQILEAAREAGAMFASYIVLRLPHELDAVFQDWLAAHFPDRAQRVMNRIRDLHGGQDYNPDFGNRMRGT
GIWADLLRQRFYKAADRLGFSYHRYDKLRLDTAQFKPPARSVKARPVDARQGNLF
>Mature_374_residues
SDSSDRHVPRKGRGATSNLQGRFERDERTRVDDGWQPLVGQQDPDAPPRLQTTVSIERARSILSRNQSPDIPFGVSLNPY
RGCEHGCIYCFARPTHAYLELSPGLDFETRLFAKTNAAELLRETLAKPGYRCEPIALGVNTDAYQPIERELCVTRDVLQV
LHDCDHPVGLITKSTLIERDIDLLAPMAAKHLAVAAVTVTTLDAGLARKLEPRAATPSRRLRTIRTLAEAGIPVGVSVAP
VIPFITDDHMEQILEAAREAGAMFASYIVLRLPHELDAVFQDWLAAHFPDRAQRVMNRIRDLHGGQDYNPDFGNRMRGTG
IWADLLRQRFYKAADRLGFSYHRYDKLRLDTAQFKPPARSVKARPVDARQGNLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42081; Mature: 41950

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSSDRHVPRKGRGATSNLQGRFERDERTRVDDGWQPLVGQQDPDAPPRLQTTVSIERA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RSILSRNQSPDIPFGVSLNPYRGCEHGCIYCFARPTHAYLELSPGLDFETRLFAKTNAAE
HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHCCCHHH
LLRETLAKPGYRCEPIALGVNTDAYQPIERELCVTRDVLQVLHDCDHPVGLITKSTLIER
HHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DIDLLAPMAAKHLAVAAVTVTTLDAGLARKLEPRAATPSRRLRTIRTLAEAGIPVGVSVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH
PVIPFITDDHMEQILEAAREAGAMFASYIVLRLPHELDAVFQDWLAAHFPDRAQRVMNRI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH
RDLHGGQDYNPDFGNRMRGTGIWADLLRQRFYKAADRLGFSYHRYDKLRLDTAQFKPPAR
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECHHHCCCCHH
SVKARPVDARQGNLF
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDSSDRHVPRKGRGATSNLQGRFERDERTRVDDGWQPLVGQQDPDAPPRLQTTVSIERA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RSILSRNQSPDIPFGVSLNPYRGCEHGCIYCFARPTHAYLELSPGLDFETRLFAKTNAAE
HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHCCCHHH
LLRETLAKPGYRCEPIALGVNTDAYQPIERELCVTRDVLQVLHDCDHPVGLITKSTLIER
HHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DIDLLAPMAAKHLAVAAVTVTTLDAGLARKLEPRAATPSRRLRTIRTLAEAGIPVGVSVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH
PVIPFITDDHMEQILEAAREAGAMFASYIVLRLPHELDAVFQDWLAAHFPDRAQRVMNRI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH
RDLHGGQDYNPDFGNRMRGTGIWADLLRQRFYKAADRLGFSYHRYDKLRLDTAQFKPPAR
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECHHHCCCCHH
SVKARPVDARQGNLF
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]