| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is hisC2
Identifier: 17545624
GI number: 17545624
Start: 956302
End: 957426
Strand: Direct
Name: hisC2
Synonym: RSc0905
Alternate gene names: 17545624
Gene position: 956302-957426 (Clockwise)
Preceding gene: 17545623
Following gene: 17545625
Centisome position: 25.73
GC content: 68.18
Gene sequence:
>1125_bases ATGTCGTTGCAGTTCGGCCCCGAATATGTCCGTGCCATTGCCCCCTATGTGACCGGCAAGCCGATTTCCGAAGTCGCGCG CGAGTTCGGTCTGGAGGCGGCGCGCATCGTCAAGCTGGCGTCCAACGAGAACCCGCTGGGCATGCCGGCATCGGCCAGGG TGGCAATGACGGCTGCCATCGATGGGCTGGCGCGCTATCCGGACGCCAACGGTTTCAGCCTGAAGGCCGCGCTGCACGCG AAGTTCGGCGTGCCGGAGGCCTGGATCACGCTCGGCAACGGCAGCAACGACATCCTCGAACTCGCTGCGCGCGCCCTGGT GGCACCGGGGCAAGGCGTGATCTACGCGCAGCATGCGTTTGCCGTGTATGCGCTGGCGGCGCAGGAGGTCGGTGCACGGG CCGTCGAGGTGCCGGCCCGCGACTATGGCCACGATCTGGACGCGATGGCCGCCGCCATCACGCCGGACACGCGCCTGATC TACGTCGCCAACCCGAACAATCCGACCGGCACCTTCCTGCCGGCCGACGCGGTCGCTGCGTTCCTGGCCAAGGTGCCGCC GACGGTCGTCGTCGTGCTGGACGAGGCGTACAACGAATTCCTCAAGCCCGAGCAACAGTACGACTCGATCGCGTGGGTGC GTCGGTATCCGAACCTGCTGGTGTCGCGCACGTTCTCCAAGGCCTACGGGCTGGCCGGCCTGCGTGTCGGCTACGGCATC GCGCAGCCGCAGCTGACGGCGCTACTCAATCGGATCCGCCAGCCGTTCAACGTCAACAGCCTCGCGCAGGCCGCAGCTGT CGCCGCGCTGAGCGACACCGAATTCCTGCGCAGATCGGCCGAACTGAACGCCGCGGGCTATGCGCAGCTGACGCAGGCGT TTGCGCGCCTCGGGCTGGAATACGTGCCGTCGTCGGGTAACTTCGTGCTGGTCCGTGTCGGCGACGATGCGGATGCGGGC GCGCGCGTCAATCTGGCGCTGCTCAGGCAGGGCGTGATCGTGCGGCCGGTGGGCAACTATGGCCTGCCGCAGTGGCTGCG CATCAGCATCGGGCTGCCGGAGGAGAATGCCGCCTGCATCGCTGCGCTGGAGTCGGCGCTGGCGCAGGCCGAGGCCGCCG CCTGA
Upstream 100 bases:
>100_bases GCGTATTTCAAAGTGCTGGGGTCCTATCCCTCGGCACACTGAGGGATTCAGAAAGAAGCGCCCCGCACGGGCGGGGCGCC GATACCAGAGGAGCAGCCCC
Downstream 100 bases:
>100_bases CCGGCAGCGCGTCGCACGGCGGTCGCGGCCGGCACATCGGGCGCGACGCACATCGGGCTACAATGCCGCTTTGCTTTTTT CTGGCAGGGCAGTGTTGTGG
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 2
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSLQFGPEYVRAIAPYVTGKPISEVAREFGLEAARIVKLASNENPLGMPASARVAMTAAIDGLARYPDANGFSLKAALHA KFGVPEAWITLGNGSNDILELAARALVAPGQGVIYAQHAFAVYALAAQEVGARAVEVPARDYGHDLDAMAAAITPDTRLI YVANPNNPTGTFLPADAVAAFLAKVPPTVVVVLDEAYNEFLKPEQQYDSIAWVRRYPNLLVSRTFSKAYGLAGLRVGYGI AQPQLTALLNRIRQPFNVNSLAQAAAVAALSDTEFLRRSAELNAAGYAQLTQAFARLGLEYVPSSGNFVLVRVGDDADAG ARVNLALLRQGVIVRPVGNYGLPQWLRISIGLPEENAACIAALESALAQAEAAA
Sequences:
>Translated_374_residues MSLQFGPEYVRAIAPYVTGKPISEVAREFGLEAARIVKLASNENPLGMPASARVAMTAAIDGLARYPDANGFSLKAALHA KFGVPEAWITLGNGSNDILELAARALVAPGQGVIYAQHAFAVYALAAQEVGARAVEVPARDYGHDLDAMAAAITPDTRLI YVANPNNPTGTFLPADAVAAFLAKVPPTVVVVLDEAYNEFLKPEQQYDSIAWVRRYPNLLVSRTFSKAYGLAGLRVGYGI AQPQLTALLNRIRQPFNVNSLAQAAAVAALSDTEFLRRSAELNAAGYAQLTQAFARLGLEYVPSSGNFVLVRVGDDADAG ARVNLALLRQGVIVRPVGNYGLPQWLRISIGLPEENAACIAALESALAQAEAAA >Mature_373_residues SLQFGPEYVRAIAPYVTGKPISEVAREFGLEAARIVKLASNENPLGMPASARVAMTAAIDGLARYPDANGFSLKAALHAK FGVPEAWITLGNGSNDILELAARALVAPGQGVIYAQHAFAVYALAAQEVGARAVEVPARDYGHDLDAMAAAITPDTRLIY VANPNNPTGTFLPADAVAAFLAKVPPTVVVVLDEAYNEFLKPEQQYDSIAWVRRYPNLLVSRTFSKAYGLAGLRVGYGIA QPQLTALLNRIRQPFNVNSLAQAAAVAALSDTEFLRRSAELNAAGYAQLTQAFARLGLEYVPSSGNFVLVRVGDDADAGA RVNLALLRQGVIVRPVGNYGLPQWLRISIGLPEENAACIAALESALAQAEAAA
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=363, Percent_Identity=28.099173553719, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1788627, Length=241, Percent_Identity=26.1410788381743, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322075, Length=360, Percent_Identity=27.2222222222222, Blast_Score=121, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS82_RALSO (Q8Y0Y8)
Other databases:
- EMBL: AL646052 - RefSeq: NP_519026.1 - ProteinModelPortal: Q8Y0Y8 - SMR: Q8Y0Y8 - GeneID: 1219713 - GenomeReviews: AL646052_GR - KEGG: rso:RSc0905 - NMPDR: fig|267608.1.peg.905 - HOGENOM: HBG646350 - OMA: QWLRISI - ProtClustDB: PRK02731 - BioCyc: RSOL267608:RSC0905-MONOMER - BRENDA: 2.6.1.9 - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39628; Mature: 39496
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQFGPEYVRAIAPYVTGKPISEVAREFGLEAARIVKLASNENPLGMPASARVAMTAAI CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHEEHHHHH DGLARYPDANGFSLKAALHAKFGVPEAWITLGNGSNDILELAARALVAPGQGVIYAQHAF HHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEHHHH AVYALAAQEVGARAVEVPARDYGHDLDAMAAAITPDTRLIYVANPNNPTGTFLPADAVAA HHHHHHHHHHCCCEEECCCHHHCCCHHHHHHEECCCCEEEEEECCCCCCCCCCCHHHHHH FLAKVPPTVVVVLDEAYNEFLKPEQQYDSIAWVRRYPNLLVSRTFSKAYGLAGLRVGYGI HHHHCCCEEEEEEEHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCC AQPQLTALLNRIRQPFNVNSLAQAAAVAALSDTEFLRRSAELNAAGYAQLTQAFARLGLE CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCE YVPSSGNFVLVRVGDDADAGARVNLALLRQGVIVRPVGNYGLPQWLRISIGLPEENAACI EECCCCCEEEEEECCCCCCCCEEEHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCHHHH AALESALAQAEAAA HHHHHHHHHHHCCC >Mature Secondary Structure SLQFGPEYVRAIAPYVTGKPISEVAREFGLEAARIVKLASNENPLGMPASARVAMTAAI CCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHEEHHHHH DGLARYPDANGFSLKAALHAKFGVPEAWITLGNGSNDILELAARALVAPGQGVIYAQHAF HHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEHHHH AVYALAAQEVGARAVEVPARDYGHDLDAMAAAITPDTRLIYVANPNNPTGTFLPADAVAA HHHHHHHHHHCCCEEECCCHHHCCCHHHHHHEECCCCEEEEEECCCCCCCCCCCHHHHHH FLAKVPPTVVVVLDEAYNEFLKPEQQYDSIAWVRRYPNLLVSRTFSKAYGLAGLRVGYGI HHHHCCCEEEEEEEHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCC AQPQLTALLNRIRQPFNVNSLAQAAAVAALSDTEFLRRSAELNAAGYAQLTQAFARLGLE CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCE YVPSSGNFVLVRVGDDADAGARVNLALLRQGVIVRPVGNYGLPQWLRISIGLPEENAACI EECCCCCEEEEEECCCCCCCCEEEHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCHHHH AALESALAQAEAAA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852