| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17545583
Identifier: 17545583
GI number: 17545583
Start: 899435
End: 899836
Strand: Direct
Name: 17545583
Synonym: RSc0864
Alternate gene names: NA
Gene position: 899435-899836 (Clockwise)
Preceding gene: 17545582
Following gene: 17545584
Centisome position: 24.2
GC content: 68.16
Gene sequence:
>402_bases GTGAGGCCCGCCATGGACGATCTGGACAAGCTGATCCCGCAGCCGGCCGAACTTGCCGTGGGCGGCGAGACGCTCGCCAT CCAGCCGCTCAAGGTTGGCCGGCTGCCGGCCTTCCTGCGCGCGATCTCGCCGACGCTGCAGCAACTCAAGGCGCCCTCAA TCGACTGGCTCGAGCTCTTCATCGAGCGTGGCGACGATCTGCTGCAGGCCGTCGCCATCGCGGTGGACAAGCCCCGTGCG TGGGTCGATGCGCTGGCAGCCGACGAGGCGATCCTGCTGGCGGCCAAGGTGGTCGAGGTGAACGCGGATTTTTTTACCCG GACGGTGCTGCCGAGGCTCGACGGCCTGTTCGCACGGGTGACGCAGGCGGCGGCGTCTGGTTCGACGCCATCCAGCGCTT GA
Upstream 100 bases:
>100_bases CGGACGAGTACAACAAGTTCGAGATGGAGGGCTCGCTGCTGGCGGATCCGACCAAGCCGTTCGACGCGGTCCTTGGCCAA TTTGGCAGGATCGTGCAACT
Downstream 100 bases:
>100_bases TCGATCACGGCCACCGGTTGCCCGACATCCTCGGCTACACCCTGGCCCAGGTGCGCGGCTTTTTGGGGGCAGCCGTGCGT GCGGAGGCGGCGCGCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRPAMDDLDKLIPQPAELAVGGETLAIQPLKVGRLPAFLRAISPTLQQLKAPSIDWLELFIERGDDLLQAVAIAVDKPRA WVDALAADEAILLAAKVVEVNADFFTRTVLPRLDGLFARVTQAAASGSTPSSA
Sequences:
>Translated_133_residues MRPAMDDLDKLIPQPAELAVGGETLAIQPLKVGRLPAFLRAISPTLQQLKAPSIDWLELFIERGDDLLQAVAIAVDKPRA WVDALAADEAILLAAKVVEVNADFFTRTVLPRLDGLFARVTQAAASGSTPSSA >Mature_133_residues MRPAMDDLDKLIPQPAELAVGGETLAIQPLKVGRLPAFLRAISPTLQQLKAPSIDWLELFIERGDDLLQAVAIAVDKPRA WVDALAADEAILLAAKVVEVNADFFTRTVLPRLDGLFARVTQAAASGSTPSSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14214; Mature: 14214
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAMDDLDKLIPQPAELAVGGETLAIQPLKVGRLPAFLRAISPTLQQLKAPSIDWLELF CCCCHHHHHHHCCCCCCEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH IERGDDLLQAVAIAVDKPRAWVDALAADEAILLAAKVVEVNADFFTRTVLPRLDGLFARV HHCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TQAAASGSTPSSA HHHHHCCCCCCCC >Mature Secondary Structure MRPAMDDLDKLIPQPAELAVGGETLAIQPLKVGRLPAFLRAISPTLQQLKAPSIDWLELF CCCCHHHHHHHCCCCCCEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH IERGDDLLQAVAIAVDKPRAWVDALAADEAILLAAKVVEVNADFFTRTVLPRLDGLFARV HHCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TQAAASGSTPSSA HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA