| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17545581
Identifier: 17545581
GI number: 17545581
Start: 898096
End: 898542
Strand: Direct
Name: 17545581
Synonym: RSc0862
Alternate gene names: NA
Gene position: 898096-898542 (Clockwise)
Preceding gene: 17545580
Following gene: 17545582
Centisome position: 24.17
GC content: 73.83
Gene sequence:
>447_bases ATGGCAGTCAACTCCGTCCGTGAGCGGATCCTGCTCGCGGTGATGGCGGCCGTCCGGGTGCCGGTCCAGGCGCTGGGCGC CACGCTGCACCGGTCTCCCGCCGTCGCCATCGCGCGGGAGCAGTGCCCGGCGCTGGTGGTGTATCCGGAGAGCGATGCGA TCGCCAGCCGGGCCAACGACCGGGTCACGCGCGAACTGACCGTGCGGGTGACGGCGCTGGCCCGCGCGGTGCCGCCCGCC GCGCCGGAGACGGCAGCCGATGCGCTGCTGACCGCCGCCCACGCTGCGCTGATGGCCAACGTGAATTGCGGTGGCCTGGC GCTTGGCATCCACGAGCTGGACTGCGAGTGGGACGTCGAGGACGCCGACGCCGTGGCGGCGGCCATTCCGGCGCGCTACC GCATCACCTACCGGACCCTGGCCGCCGATCTGGCGACCCCCGCCTGA
Upstream 100 bases:
>100_bases AGACGGTCGAGATCGCCGGTGGGGTCTTCCATGTGCGCGATCTGCGCGCGGTCGGCGACGGCTCCGAAATCCGCGCCAAG CTCACCCGCCTGTAACACCG
Downstream 100 bases:
>100_bases CGGCCATCTGACCGCCGATTCGCTCGCCAACTCGGGCGAGACAGCCGCACTTCGAGAGGCCCGTCCGGGCCGCTCTCACC CCCGTACCCATTTCTGCGTC
Product: signal peptide protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAVNSVRERILLAVMAAVRVPVQALGATLHRSPAVAIAREQCPALVVYPESDAIASRANDRVTRELTVRVTALARAVPPA APETAADALLTAAHAALMANVNCGGLALGIHELDCEWDVEDADAVAAAIPARYRITYRTLAADLATPA
Sequences:
>Translated_148_residues MAVNSVRERILLAVMAAVRVPVQALGATLHRSPAVAIAREQCPALVVYPESDAIASRANDRVTRELTVRVTALARAVPPA APETAADALLTAAHAALMANVNCGGLALGIHELDCEWDVEDADAVAAAIPARYRITYRTLAADLATPA >Mature_147_residues AVNSVRERILLAVMAAVRVPVQALGATLHRSPAVAIAREQCPALVVYPESDAIASRANDRVTRELTVRVTALARAVPPAA PETAADALLTAAHAALMANVNCGGLALGIHELDCEWDVEDADAVAAAIPARYRITYRTLAADLATPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15458; Mature: 15327
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNSVRERILLAVMAAVRVPVQALGATLHRSPAVAIAREQCPALVVYPESDAIASRAND CCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHCCCCEEEEECCCCHHHHHCCC RVTRELTVRVTALARAVPPAAPETAADALLTAAHAALMANVNCGGLALGIHELDCEWDVE CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC DADAVAAAIPARYRITYRTLAADLATPA CHHHHHHHCCCHHEEHHHHHHHHHCCCC >Mature Secondary Structure AVNSVRERILLAVMAAVRVPVQALGATLHRSPAVAIAREQCPALVVYPESDAIASRAND CHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHCCCCEEEEECCCCHHHHHCCC RVTRELTVRVTALARAVPPAAPETAADALLTAAHAALMANVNCGGLALGIHELDCEWDVE CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC DADAVAAAIPARYRITYRTLAADLATPA CHHHHHHHCCCHHEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA