Click here to switch to the map view.

The map label for this gene is 17545573

Identifier: 17545573

GI number: 17545573

Start: 892467

End: 892976

Strand: Direct

Name: 17545573

Synonym: RSc0854

Alternate gene names: NA

Gene position: 892467-892976 (Clockwise)

Preceding gene: 17545572

Following gene: 17545574

Centisome position: 24.01

GC content: 68.82

Gene sequence:

>510_bases
ATGAGTTTGCAGACTCGCATCGAATCCCTCGTCCTGCGTCTGGCGTCGGAGTTCAAGACCATCCACGACCAGGTCGGCAC
GCTGGCCCGGCTGTCGACCACCGACAAGACCAGTCTGGTCTCGGCGATCAACGAGCTGCGCGCGCAGTTCGACAAGATCG
CCAGCGCCGCGCTGATCGATGACGCCAACGCGGCGGGCACCACGACCACGTTCTCGGCGACCAAGATCACCGGCCTGCTC
GACGCGCTCAAGGCCGACCTGCTGGGCGGCGCCGACGCGGCTTTCGACACCCTCAAGGAACTGCAGGAGGCGATCCTCAA
GGACCAGAGCGGCATCGCCGCGCTGCTGGCCGCCGTGGACCGCCGTGTGCGCTTCGACGCCGCGCAGGCGCTGACCGCCG
ACGAGCAGACCCAGGCCCGCCAGAACATCGGTGCGGTCGCCGCCAGCGCCATCGGCGACCCCGAGACCGACTTCGTGCCG
GTCTTCGAGGCGGCTCTGACCGGCGCCTGA

Upstream 100 bases:

>100_bases
CCTGGGGTCCGCCAAGCCGGCCGGCGCGTGATCAAGAGCCGCTGGCTGTCGTCCTGAGCACCCCGTTGCTCCTCATCCTG
ATACCCGGAGTTCATCCCCC

Downstream 100 bases:

>100_bases
TCCGGCGTCCATGTCGCTGACCGGGAACATCGCCGAGCTTGCCGCTGCGATTGCCCAGGAGGTCCGCGCCCGCATCACTG
CGGATCACCCGGGTCTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSLQTRIESLVLRLASEFKTIHDQVGTLARLSTTDKTSLVSAINELRAQFDKIASAALIDDANAAGTTTTFSATKITGLL
DALKADLLGGADAAFDTLKELQEAILKDQSGIAALLAAVDRRVRFDAAQALTADEQTQARQNIGAVAASAIGDPETDFVP
VFEAALTGA

Sequences:

>Translated_169_residues
MSLQTRIESLVLRLASEFKTIHDQVGTLARLSTTDKTSLVSAINELRAQFDKIASAALIDDANAAGTTTTFSATKITGLL
DALKADLLGGADAAFDTLKELQEAILKDQSGIAALLAAVDRRVRFDAAQALTADEQTQARQNIGAVAASAIGDPETDFVP
VFEAALTGA
>Mature_168_residues
SLQTRIESLVLRLASEFKTIHDQVGTLARLSTTDKTSLVSAINELRAQFDKIASAALIDDANAAGTTTTFSATKITGLLD
ALKADLLGGADAAFDTLKELQEAILKDQSGIAALLAAVDRRVRFDAAQALTADEQTQARQNIGAVAASAIGDPETDFVPV
FEAALTGA

Specific function: Unknown

COG id: COG5511

COG function: function code R; Bacteriophage capsid protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17662; Mature: 17531

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQTRIESLVLRLASEFKTIHDQVGTLARLSTTDKTSLVSAINELRAQFDKIASAALID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DANAAGTTTTFSATKITGLLDALKADLLGGADAAFDTLKELQEAILKDQSGIAALLAAVD
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RRVRFDAAQALTADEQTQARQNIGAVAASAIGDPETDFVPVFEAALTGA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SLQTRIESLVLRLASEFKTIHDQVGTLARLSTTDKTSLVSAINELRAQFDKIASAALID
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DANAAGTTTTFSATKITGLLDALKADLLGGADAAFDTLKELQEAILKDQSGIAALLAAVD
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RRVRFDAAQALTADEQTQARQNIGAVAASAIGDPETDFVPVFEAALTGA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA