Click here to switch to the map view.

The map label for this gene is 17545166

Identifier: 17545166

GI number: 17545166

Start: 474524

End: 475864

Strand: Reverse

Name: 17545166

Synonym: RSc0447

Alternate gene names: NA

Gene position: 475864-474524 (Counterclockwise)

Preceding gene: 17545167

Following gene: 17545160

Centisome position: 12.8

GC content: 69.05

Gene sequence:

>1341_bases
ATGACGACGACGCCATGGTGGCCGCTACGCGCGGTTGCGTGTGCATGCCTGTTGCTGAGCGGCAGGCCGATCCTTGCGCA
GACGACGAACGAGGTGGTGGATGACAAGCCGCCGAGTTTCGAAACCCTGCAGCGGCAACTCGCCGAGGAGCAGGCGCGCC
TGAGCGAACTCAAGCGCGCCATCCAGCAGCAGGAAGCCCGCCTGAACGACATGCGGCGCGCCCTCGGCATGGGTGCGCTG
GACGATGTGCGCGGTGCCGGGGCACCCGGCGCGGGCGCGGATTCGGGCAGCGCCACCGGCACGACCGGCAGCGCGGCCTC
GCAGATGGCGCAGAACGGCCAGCCCGGCGCCACGCCGGTGGGCCAGCCGCCCGCCGAGACCGGCCAGCCGCCGCGCGTCG
CGCAGATCTTCGACGAGCCCAGCGCGCTCACGCCGCCCGGCAAGGTGGTGGTCGAGCCCTCGCTGCAGATGGCGTATTCG
TCGTCCGACCGGGTGGCGCTGGTGGGCTACACCATCATCCCGGCGCTGCTGATCGGCCTGATCGACGTGCGCCAGGTCAA
GACCACCACGCTCACCAGCACGGTGGCGGTGCGCTACGGGCTGGTCAAGCGCTGGGAGCTCGAAGCGCGCGTGCCCTACG
TCTACAGCACCAGCGAGAATGTCAGCCGCGAGATCTTCACCGGCACGGCCACCGACCGCGCCTTCAGCTCGCACGGCCAC
GGTATCGGCGACGTCGAGCTGACCGCGCGCTACCAGCTCAACGCCGGCGGCATCGACAAACCGTTCTATATCGGCTGGCT
GCGCTTGAAGACCCGCACCGGCAAGGACCCGTTCGAGGTCACCACCGACTGCATCACGCGCTGCGTCAGCAACACCACCG
GCACCGGACTGCCGCTGCAGCAGCCCACCGGCTCGGGCTTCTTCGCGGTGCAGCCGGGACTGACCTGGCTGTACCCGACC
GATCCGGCCGTGTTCTTCGGCAGCATCAGCTACCTGCACAACTTCGAGCGCAAGGACGTCAGCCTGAACCTGGTGGACGG
CTCGAAGGAGTTCCTGGGCGACGTGAAGGCCGGCGACATCATCGGCCTGAACTTCGGCATGGGGCTGGCACTGAACGAGC
GCGCCGCGTTCTCGATCGGCTACGACCAGAGCATCATCGGCCCGACCAGGCAGAACGGCCAGCGCGTGCCGGGCTCGGTG
CGCACCATCCTGGGCACGCTGCTGGTCGGCTACTCGTACCGCATCTCGCCCAAGATGACGCTGAACCTGTCGGTGGGCGC
GGGGCTCACGCGCGACACGCCCGACCTGACGGTCACGCTGCGCCTGCCGATCACCTTCTAG

Upstream 100 bases:

>100_bases
CCCTGCTCGCCTATAGTGGAACCGCAGTCCGGCACCCGGGGGAATCGCGAGGCACCCGTCCGCTCTTGTGGAGGGGGCTC
TCTCGACGGGGGACATGGCC

Downstream 100 bases:

>100_bases
GACGCGGCCGGCCCGCTCAGTGCGGGTTGACCACGTTCGTCAGCGCGTTCTGCAGGAGGTTGCCGAGATTGAGTTGCCGG
AACTGCGGCAGGCTGTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MTTTPWWPLRAVACACLLLSGRPILAQTTNEVVDDKPPSFETLQRQLAEEQARLSELKRAIQQQEARLNDMRRALGMGAL
DDVRGAGAPGAGADSGSATGTTGSAASQMAQNGQPGATPVGQPPAETGQPPRVAQIFDEPSALTPPGKVVVEPSLQMAYS
SSDRVALVGYTIIPALLIGLIDVRQVKTTTLTSTVAVRYGLVKRWELEARVPYVYSTSENVSREIFTGTATDRAFSSHGH
GIGDVELTARYQLNAGGIDKPFYIGWLRLKTRTGKDPFEVTTDCITRCVSNTTGTGLPLQQPTGSGFFAVQPGLTWLYPT
DPAVFFGSISYLHNFERKDVSLNLVDGSKEFLGDVKAGDIIGLNFGMGLALNERAAFSIGYDQSIIGPTRQNGQRVPGSV
RTILGTLLVGYSYRISPKMTLNLSVGAGLTRDTPDLTVTLRLPITF

Sequences:

>Translated_446_residues
MTTTPWWPLRAVACACLLLSGRPILAQTTNEVVDDKPPSFETLQRQLAEEQARLSELKRAIQQQEARLNDMRRALGMGAL
DDVRGAGAPGAGADSGSATGTTGSAASQMAQNGQPGATPVGQPPAETGQPPRVAQIFDEPSALTPPGKVVVEPSLQMAYS
SSDRVALVGYTIIPALLIGLIDVRQVKTTTLTSTVAVRYGLVKRWELEARVPYVYSTSENVSREIFTGTATDRAFSSHGH
GIGDVELTARYQLNAGGIDKPFYIGWLRLKTRTGKDPFEVTTDCITRCVSNTTGTGLPLQQPTGSGFFAVQPGLTWLYPT
DPAVFFGSISYLHNFERKDVSLNLVDGSKEFLGDVKAGDIIGLNFGMGLALNERAAFSIGYDQSIIGPTRQNGQRVPGSV
RTILGTLLVGYSYRISPKMTLNLSVGAGLTRDTPDLTVTLRLPITF
>Mature_445_residues
TTTPWWPLRAVACACLLLSGRPILAQTTNEVVDDKPPSFETLQRQLAEEQARLSELKRAIQQQEARLNDMRRALGMGALD
DVRGAGAPGAGADSGSATGTTGSAASQMAQNGQPGATPVGQPPAETGQPPRVAQIFDEPSALTPPGKVVVEPSLQMAYSS
SDRVALVGYTIIPALLIGLIDVRQVKTTTLTSTVAVRYGLVKRWELEARVPYVYSTSENVSREIFTGTATDRAFSSHGHG
IGDVELTARYQLNAGGIDKPFYIGWLRLKTRTGKDPFEVTTDCITRCVSNTTGTGLPLQQPTGSGFFAVQPGLTWLYPTD
PAVFFGSISYLHNFERKDVSLNLVDGSKEFLGDVKAGDIIGLNFGMGLALNERAAFSIGYDQSIIGPTRQNGQRVPGSVR
TILGTLLVGYSYRISPKMTLNLSVGAGLTRDTPDLTVTLRLPITF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47809; Mature: 47678

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTPWWPLRAVACACLLLSGRPILAQTTNEVVDDKPPSFETLQRQLAEEQARLSELKRA
CCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IQQQEARLNDMRRALGMGALDDVRGAGAPGAGADSGSATGTTGSAASQMAQNGQPGATPV
HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
GQPPAETGQPPRVAQIFDEPSALTPPGKVVVEPSLQMAYSSSDRVALVGYTIIPALLIGL
CCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCEEEECCCCCEEEEHHHHHHHHHHHH
IDVRQVKTTTLTSTVAVRYGLVKRWELEARVPYVYSTSENVSREIFTGTATDRAFSSHGH
HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCHHEEECCCCHHHHHHCCC
GIGDVELTARYQLNAGGIDKPFYIGWLRLKTRTGKDPFEVTTDCITRCVSNTTGTGLPLQ
CCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCC
QPTGSGFFAVQPGLTWLYPTDPAVFFGSISYLHNFERKDVSLNLVDGSKEFLGDVKAGDI
CCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCE
IGLNFGMGLALNERAAFSIGYDQSIIGPTRQNGQRVPGSVRTILGTLLVGYSYRISPKMT
EEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCEEE
LNLSVGAGLTRDTPDLTVTLRLPITF
EEEEECCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
TTTPWWPLRAVACACLLLSGRPILAQTTNEVVDDKPPSFETLQRQLAEEQARLSELKRA
CCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IQQQEARLNDMRRALGMGALDDVRGAGAPGAGADSGSATGTTGSAASQMAQNGQPGATPV
HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
GQPPAETGQPPRVAQIFDEPSALTPPGKVVVEPSLQMAYSSSDRVALVGYTIIPALLIGL
CCCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCEEEECCCCCEEEEHHHHHHHHHHHH
IDVRQVKTTTLTSTVAVRYGLVKRWELEARVPYVYSTSENVSREIFTGTATDRAFSSHGH
HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCHHEEECCCCHHHHHHCCC
GIGDVELTARYQLNAGGIDKPFYIGWLRLKTRTGKDPFEVTTDCITRCVSNTTGTGLPLQ
CCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCC
QPTGSGFFAVQPGLTWLYPTDPAVFFGSISYLHNFERKDVSLNLVDGSKEFLGDVKAGDI
CCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCE
IGLNFGMGLALNERAAFSIGYDQSIIGPTRQNGQRVPGSVRTILGTLLVGYSYRISPKMT
EEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCEEE
LNLSVGAGLTRDTPDLTVTLRLPITF
EEEEECCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA