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The map label for this gene is 17230939

Identifier: 17230939

GI number: 17230939

Start: 4156090

End: 4156677

Strand: Reverse

Name: 17230939

Synonym: all3447

Alternate gene names: NA

Gene position: 4156677-4156090 (Counterclockwise)

Preceding gene: 17230950

Following gene: 17230938

Centisome position: 64.81

GC content: 36.39

Gene sequence:

>588_bases
ATGATGACTTTCACAAAGACATCGGAGCAAATAGAAGTTTCATCAAAAGAAACGAAAGCCAACTTTTTACAAGAAGTCAT
GGAAAGACTAGAAGATGGCATTCTTATTTTGACTAATGCCGGAGAAATAGTTCATGCCAATGCGTCAGCTTATCATTTAT
GTTGCCAGCTAAGTCAAGGTAGTTTTGATTCTCAACTTATTCCGCCGATAATTTGGAAATTGTGCCAACTCTTGCTAAAT
ACTCATAATTTATATCCTGAAAAGAATCTGATTTTATCTGATGAGATTATGCTCGATAAATCAAATACACTAAGGGTTCG
TGTCAGATTAGTTAAGCTAGAACGGTTCATCACATCTTGTTTATTAGTAACTATTGAGAATCAGTATGAATCTTTAAAAA
ATGCAGCGATCGCCGAAATCAGGAAATACGATCTCACTCCTAGAGAAGCTGAAATCTGGCGACTTTATCGCTCTCATAAT
AGCTATAAAGAAATTGCCGCCCAGCTTTACATTACTATCAATACTGTCAAGAAGCACATGAAGAATATTCATGCTAAACG
CCAGGCATTCGTAGCTGTTCACCAATGA

Upstream 100 bases:

>100_bases
GTATCAACCTAATTACAATAATTTTACATTAGTTCACACTTTTCAATTTATTCTTGCCAACTCTATCAACTCTTTTCCTT
TACAAAAATTGAAAAAATCT

Downstream 100 bases:

>100_bases
ATCGATGAAAATCTTAATTCATTAGTAAAATTATTTTATCCAGTTTTTTACTCATGAATTAAGATTTTTGGAATCACTGT
GGCTCTAGCCCAGTGAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: LuxR Family Transcriptional Regulator

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MMTFTKTSEQIEVSSKETKANFLQEVMERLEDGILILTNAGEIVHANASAYHLCCQLSQGSFDSQLIPPIIWKLCQLLLN
THNLYPEKNLILSDEIMLDKSNTLRVRVRLVKLERFITSCLLVTIENQYESLKNAAIAEIRKYDLTPREAEIWRLYRSHN
SYKEIAAQLYITINTVKKHMKNIHAKRQAFVAVHQ

Sequences:

>Translated_195_residues
MMTFTKTSEQIEVSSKETKANFLQEVMERLEDGILILTNAGEIVHANASAYHLCCQLSQGSFDSQLIPPIIWKLCQLLLN
THNLYPEKNLILSDEIMLDKSNTLRVRVRLVKLERFITSCLLVTIENQYESLKNAAIAEIRKYDLTPREAEIWRLYRSHN
SYKEIAAQLYITINTVKKHMKNIHAKRQAFVAVHQ
>Mature_195_residues
MMTFTKTSEQIEVSSKETKANFLQEVMERLEDGILILTNAGEIVHANASAYHLCCQLSQGSFDSQLIPPIIWKLCQLLLN
THNLYPEKNLILSDEIMLDKSNTLRVRVRLVKLERFITSCLLVTIENQYESLKNAAIAEIRKYDLTPREAEIWRLYRSHN
SYKEIAAQLYITINTVKKHMKNIHAKRQAFVAVHQ

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22590; Mature: 22590

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTFTKTSEQIEVSSKETKANFLQEVMERLEDGILILTNAGEIVHANASAYHLCCQLSQG
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCEEEEEECCCC
SFDSQLIPPIIWKLCQLLLNTHNLYPEKNLILSDEIMLDKSNTLRVRVRLVKLERFITSC
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECEEEEECCCEEEEEHHHHHHHHHHHHH
LLVTIENQYESLKNAAIAEIRKYDLTPREAEIWRLYRSHNSYKEIAAQLYITINTVKKHM
HHHEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KNIHAKRQAFVAVHQ
HHHHHHHHHEEEECC
>Mature Secondary Structure
MMTFTKTSEQIEVSSKETKANFLQEVMERLEDGILILTNAGEIVHANASAYHLCCQLSQG
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCEEEEEECCCC
SFDSQLIPPIIWKLCQLLLNTHNLYPEKNLILSDEIMLDKSNTLRVRVRLVKLERFITSC
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECEEEEECCCEEEEEHHHHHHHHHHHHH
LLVTIENQYESLKNAAIAEIRKYDLTPREAEIWRLYRSHNSYKEIAAQLYITINTVKKHM
HHHEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KNIHAKRQAFVAVHQ
HHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA