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The map label for this gene is 17230260

Identifier: 17230260

GI number: 17230260

Start: 3363926

End: 3364696

Strand: Direct

Name: 17230260

Synonym: alr2768

Alternate gene names: NA

Gene position: 3363926-3364696 (Clockwise)

Preceding gene: 17230258

Following gene: 17230261

Centisome position: 52.45

GC content: 42.54

Gene sequence:

>771_bases
ATGAAAAACCTAATTTTTATTGCTACTACTTTTATAACTACAATTAGTTTGACCAATATTGCCCAAGCCGCAAATCAAGA
ACATATTAGACAGTTGTTGGCAACTAAGCAATGTCAAAACTGTGACTTGAGTGGTGCTGGTTTAGTGATGGCTGACTTAA
CTGGAGCCAATTTAAGCGGCGCTAACCTTGCGGGTGCAAATCTGAGCCGGGCAAATTTGAGTGGTGCTGATTTGCGCGGC
GCAAACTTAAGTGGTGCGGGTTTATTTGGGGTGAACTTGAGTGAAGCCAAACTCGGTGGAGCAAATTTAGCCGGTGCTGA
TTTAAGAAGTACATTTTTAAGTAATGCCGAATTTACTGGTGCATATTTGCAGGGAACTAACTTTCAAGGTGCGTTAGGGA
TACCATTGCAAATTGCGACACCAGACGAATTTTATGCTTTGGGTGTAGCAGAGGCACAAAAAGGCAATCAACAACAGGCT
ATTAATTATTTTAACCAGGCGATCGCATCTAAACCAGAATACGCTGGTGCATATTTAGCCCGTGGTATTGCTCGATACCA
GCTATTTGACCGCCAAGGTGCAGCCCAAGATGCCCAAACCGCAGAAAAACTCTTTACCTCTCAAGATAACGCCACAGGAA
TACAAACAGCCCAAGCTTTCATCAAAGAACTACAAACACCATACACAGAAAAGTTAAGTGCCGGTAAACCCAGTTTTTTC
GACTTTTTAGGCAGTCTAGGTTCAGTATTGCTACAGTTCCTACCATTTTGA

Upstream 100 bases:

>100_bases
GTCCTAATTGCTTTATATCGGTCTATACGGAGGGCAAACTGCTCAAGTGACTCATATTATAAGCGATTGAGTACTGAGTA
GAAAAACTCTGAAACCGACG

Downstream 100 bases:

>100_bases
ATGCTTAATTTTGAATTGGAGGTAAGCGACTTGACTTTCTCAAATCAACTTTGGACAGCAAATCAAGATTTAGCCGCAGC
TTGCCTAGAGCATCCTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKNLIFIATTFITTISLTNIAQAANQEHIRQLLATKQCQNCDLSGAGLVMADLTGANLSGANLAGANLSRANLSGADLRG
ANLSGAGLFGVNLSEAKLGGANLAGADLRSTFLSNAEFTGAYLQGTNFQGALGIPLQIATPDEFYALGVAEAQKGNQQQA
INYFNQAIASKPEYAGAYLARGIARYQLFDRQGAAQDAQTAEKLFTSQDNATGIQTAQAFIKELQTPYTEKLSAGKPSFF
DFLGSLGSVLLQFLPF

Sequences:

>Translated_256_residues
MKNLIFIATTFITTISLTNIAQAANQEHIRQLLATKQCQNCDLSGAGLVMADLTGANLSGANLAGANLSRANLSGADLRG
ANLSGAGLFGVNLSEAKLGGANLAGADLRSTFLSNAEFTGAYLQGTNFQGALGIPLQIATPDEFYALGVAEAQKGNQQQA
INYFNQAIASKPEYAGAYLARGIARYQLFDRQGAAQDAQTAEKLFTSQDNATGIQTAQAFIKELQTPYTEKLSAGKPSFF
DFLGSLGSVLLQFLPF
>Mature_256_residues
MKNLIFIATTFITTISLTNIAQAANQEHIRQLLATKQCQNCDLSGAGLVMADLTGANLSGANLAGANLSRANLSGADLRG
ANLSGAGLFGVNLSEAKLGGANLAGADLRSTFLSNAEFTGAYLQGTNFQGALGIPLQIATPDEFYALGVAEAQKGNQQQA
INYFNQAIASKPEYAGAYLARGIARYQLFDRQGAAQDAQTAEKLFTSQDNATGIQTAQAFIKELQTPYTEKLSAGKPSFF
DFLGSLGSVLLQFLPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 26932; Mature: 26932

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLIFIATTFITTISLTNIAQAANQEHIRQLLATKQCQNCDLSGAGLVMADLTGANLSG
CCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
ANLAGANLSRANLSGADLRGANLSGAGLFGVNLSEAKLGGANLAGADLRSTFLSNAEFTG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCCCCCHHHHHHHHCCCCCCC
AYLQGTNFQGALGIPLQIATPDEFYALGVAEAQKGNQQQAINYFNQAIASKPEYAGAYLA
EEEECCCCCCCCCCCEEEECCCCCEEEEHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
RGIARYQLFDRQGAAQDAQTAEKLFTSQDNATGIQTAQAFIKELQTPYTEKLSAGKPSFF
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHH
DFLGSLGSVLLQFLPF
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNLIFIATTFITTISLTNIAQAANQEHIRQLLATKQCQNCDLSGAGLVMADLTGANLSG
CCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
ANLAGANLSRANLSGADLRGANLSGAGLFGVNLSEAKLGGANLAGADLRSTFLSNAEFTG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCCCCCHHHHHHHHCCCCCCC
AYLQGTNFQGALGIPLQIATPDEFYALGVAEAQKGNQQQAINYFNQAIASKPEYAGAYLA
EEEECCCCCCCCCCCEEEECCCCCEEEEHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
RGIARYQLFDRQGAAQDAQTAEKLFTSQDNATGIQTAQAFIKELQTPYTEKLSAGKPSFF
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHH
DFLGSLGSVLLQFLPF
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]