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The map label for this gene is tnpA [H]

Identifier: 17230190

GI number: 17230190

Start: 3288210

End: 3289430

Strand: Direct

Name: tnpA [H]

Synonym: alr2698

Alternate gene names: 17230190

Gene position: 3288210-3289430 (Clockwise)

Preceding gene: 17230189

Following gene: 17230200

Centisome position: 51.27

GC content: 31.86

Gene sequence:

>1221_bases
ATGAAGTTTCCAGTAGAACAAATCCTGAATCTTCCCGATATGAAAGTATTAGATTTTCAAGAACTTGAAGGTGAAGAAAT
AATTATAACGATAGAAAAAAGTGTGAACTATTCGACTTGTCCTTGGTGCGGTCAAATGACTCACAGTATACATCAAAATC
ACTGGCGAATAATTCATGATTTACCGTGGAATAAAAAACCAGTGTTATTAAAAATAAATCGTCGGCAATTTAAATGTCAT
AAGTGTAAAAAAGTATTTAGCGAACAACTAGACTTTGTAGATAAAAGTAAAGGATATACTAAAAGATTAGCGACCGACAT
AGTTCAACAAGTATTAAATAGTAATATCCGGAGTGTTGCCCAAAGAAATGGATTAAGTGATGAAGAAGTAGAATCAATGT
TAAAAAAGCAAGTCTCGCACATATTAAACATTAACCTAAGTCAGGTAAAAAAGTTAGGTATAGATGAAATAGCTTTAGTT
AAAGGAAAAGGAAACTACTTAGCAATATTAGTGGATTTAGATACTCATAAACCAATTGAGATAGTGCAATCAAGACGAAT
AGAAGATATTCGTGAAGTACTTGTCAGTTGGGGAGTTGAGATACTTAATCAAATTGAAGAAGTGAGCATTGACCTCTGGT
TGCCTTATAAAAATTTAGTAGAAGAGTTAATGCCAAATGCTAATATAACTGCTGATAGATTTCATGTAATGAAACAAGTA
AATGACGAATTAGATACTATGCGTAAAGCTGAAAATAAAGCAGCTATATCGCTAGATAATAAATCAGAAAAAGAGCGAAT
ATTAGAGGCATTGAATAAGAGTAAATATGCGATTATTAAAAATGAAGACTCTCTAAATGAAAAGCAAAGAGAAAAATTAA
AATCTGTGCAAGAGGTGTCGCCAAATCTCGCCAAAATGCACTCACTTAAAGAACAATTTCGAGATATATTTGAAACAACT
AAATCCTGGGGAGATAGTATAATAAAACTATTGGATTGGATGTATGATGCACTTTCATATTTCCCGAAAAGTATAGGTAC
AATAGTTAGATGGTTTGGTGAAATAGTCGGTTATTTTGACGGAAGAACCACAAGTGGTGCTGTAGAAGGAATTAATAATA
AACTCAAGTTAATTAAAAGACTTGGATATGGCTTTCGTAACTTTACCAATTTCAGATTACGCAGTTTGTTAAACTGGCAT
TTTACTATTAATTCTCCATAA

Upstream 100 bases:

>100_bases
TAAGATAGATTACATAGGCATTTAGTAAATATCAAGCATAGTTAAAGAACTCTAAAATTATCATCTATATTATAATATAG
TAAAGTTTTAGGCGATCGCT

Downstream 100 bases:

>100_bases
AATTAACTGAAGAACCAGAAAGATTTAAAGATGTTAAAGTTTGTTTAATACATCAACATCCTCTTGTGCAAAATTGTCCT
TGCTGTCATCGCCAACTACT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKFPVEQILNLPDMKVLDFQELEGEEIIITIEKSVNYSTCPWCGQMTHSIHQNHWRIIHDLPWNKKPVLLKINRRQFKCH
KCKKVFSEQLDFVDKSKGYTKRLATDIVQQVLNSNIRSVAQRNGLSDEEVESMLKKQVSHILNINLSQVKKLGIDEIALV
KGKGNYLAILVDLDTHKPIEIVQSRRIEDIREVLVSWGVEILNQIEEVSIDLWLPYKNLVEELMPNANITADRFHVMKQV
NDELDTMRKAENKAAISLDNKSEKERILEALNKSKYAIIKNEDSLNEKQREKLKSVQEVSPNLAKMHSLKEQFRDIFETT
KSWGDSIIKLLDWMYDALSYFPKSIGTIVRWFGEIVGYFDGRTTSGAVEGINNKLKLIKRLGYGFRNFTNFRLRSLLNWH
FTINSP

Sequences:

>Translated_406_residues
MKFPVEQILNLPDMKVLDFQELEGEEIIITIEKSVNYSTCPWCGQMTHSIHQNHWRIIHDLPWNKKPVLLKINRRQFKCH
KCKKVFSEQLDFVDKSKGYTKRLATDIVQQVLNSNIRSVAQRNGLSDEEVESMLKKQVSHILNINLSQVKKLGIDEIALV
KGKGNYLAILVDLDTHKPIEIVQSRRIEDIREVLVSWGVEILNQIEEVSIDLWLPYKNLVEELMPNANITADRFHVMKQV
NDELDTMRKAENKAAISLDNKSEKERILEALNKSKYAIIKNEDSLNEKQREKLKSVQEVSPNLAKMHSLKEQFRDIFETT
KSWGDSIIKLLDWMYDALSYFPKSIGTIVRWFGEIVGYFDGRTTSGAVEGINNKLKLIKRLGYGFRNFTNFRLRSLLNWH
FTINSP
>Mature_406_residues
MKFPVEQILNLPDMKVLDFQELEGEEIIITIEKSVNYSTCPWCGQMTHSIHQNHWRIIHDLPWNKKPVLLKINRRQFKCH
KCKKVFSEQLDFVDKSKGYTKRLATDIVQQVLNSNIRSVAQRNGLSDEEVESMLKKQVSHILNINLSQVKKLGIDEIALV
KGKGNYLAILVDLDTHKPIEIVQSRRIEDIREVLVSWGVEILNQIEEVSIDLWLPYKNLVEELMPNANITADRFHVMKQV
NDELDTMRKAENKAAISLDNKSEKERILEALNKSKYAIIKNEDSLNEKQREKLKSVQEVSPNLAKMHSLKEQFRDIFETT
KSWGDSIIKLLDWMYDALSYFPKSIGTIVRWFGEIVGYFDGRTTSGAVEGINNKLKLIKRLGYGFRNFTNFRLRSLLNWH
FTINSP

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 47227; Mature: 47227

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00392 DDC_GAD_HDC_YDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPVEQILNLPDMKVLDFQELEGEEIIITIEKSVNYSTCPWCGQMTHSIHQNHWRIIHD
CCCCHHHHCCCCCCEECCHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEC
LPWNKKPVLLKINRRQFKCHKCKKVFSEQLDFVDKSKGYTKRLATDIVQQVLNSNIRSVA
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QRNGLSDEEVESMLKKQVSHILNINLSQVKKLGIDEIALVKGKGNYLAILVDLDTHKPIE
HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCHHH
IVQSRRIEDIREVLVSWGVEILNQIEEVSIDLWLPYKNLVEELMPNANITADRFHVMKQV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCCCCHHHHHHHHHH
NDELDTMRKAENKAAISLDNKSEKERILEALNKSKYAIIKNEDSLNEKQREKLKSVQEVS
HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHC
PNLAKMHSLKEQFRDIFETTKSWGDSIIKLLDWMYDALSYFPKSIGTIVRWFGEIVGYFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GRTTSGAVEGINNKLKLIKRLGYGFRNFTNFRLRSLLNWHFTINSP
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MKFPVEQILNLPDMKVLDFQELEGEEIIITIEKSVNYSTCPWCGQMTHSIHQNHWRIIHD
CCCCHHHHCCCCCCEECCHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEC
LPWNKKPVLLKINRRQFKCHKCKKVFSEQLDFVDKSKGYTKRLATDIVQQVLNSNIRSVA
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QRNGLSDEEVESMLKKQVSHILNINLSQVKKLGIDEIALVKGKGNYLAILVDLDTHKPIE
HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCHHH
IVQSRRIEDIREVLVSWGVEILNQIEEVSIDLWLPYKNLVEELMPNANITADRFHVMKQV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCCCCHHHHHHHHHH
NDELDTMRKAENKAAISLDNKSEKERILEALNKSKYAIIKNEDSLNEKQREKLKSVQEVS
HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHC
PNLAKMHSLKEQFRDIFETTKSWGDSIIKLLDWMYDALSYFPKSIGTIVRWFGEIVGYFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GRTTSGAVEGINNKLKLIKRLGYGFRNFTNFRLRSLLNWHFTINSP
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]