| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230187
Identifier: 17230187
GI number: 17230187
Start: 3286573
End: 3287058
Strand: Direct
Name: 17230187
Synonym: alr2695
Alternate gene names: NA
Gene position: 3286573-3287058 (Clockwise)
Preceding gene: 17230186
Following gene: 17230188
Centisome position: 51.24
GC content: 30.86
Gene sequence:
>486_bases ATGCAGGGTTCTATCATTGGCAGCTTCCGTAAATATTACAGAGAAATTAGGGGGGTTATAGATTTATTTGAAAGTGTAGG AATTTTTATTCTTTCTCCCACAAAATCACAAGTTATAAACCCAGATGAGGAATTTGTATTACTTGAAAGTGATGACTTAA ACTACTCTCCTGTGGAAATACAACTCATAGCTTTTCATAGAATCTTAAGATCAAGTTTTGTGTATACATTTTGTCCTAAC GGTTATATTGGACGTACTACGGCATATGAAATAGGACGAGTTGTAGAACGTAAAATAAAATTATTTTTCAGTGAAGCTCC AAAAGATTTACCTATTTTTTTGCCACAAAATTCTATTTGGAGTCCAAAAGATTTTAGTAAATATTTCTTAACTAATGGAA AATTACCTGAAACTTTAGAGGCTGGAAGTAAAACACTTTCAGAAAAGTTACATAATGATTTATTCTTAGGAAAGTATCAA GATTAA
Upstream 100 bases:
>100_bases ATAATTATTTCATGGTAATATACTAAACTCGTTAAAATAAAAAGTGATTTATTAGGATAGTATTAATCTTTTAAAAAAGA TGTAAAACGTTCAACAAATT
Downstream 100 bases:
>100_bases ATTAGGTACATAATTTATAGGTGTTAGTATGGAAAAAAAACATATTGTAATATGCGGTAGTATGTCTAATTATGAGGAAA TGTTAAAATACCAAAACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MQGSIIGSFRKYYREIRGVIDLFESVGIFILSPTKSQVINPDEEFVLLESDDLNYSPVEIQLIAFHRILRSSFVYTFCPN GYIGRTTAYEIGRVVERKIKLFFSEAPKDLPIFLPQNSIWSPKDFSKYFLTNGKLPETLEAGSKTLSEKLHNDLFLGKYQ D
Sequences:
>Translated_161_residues MQGSIIGSFRKYYREIRGVIDLFESVGIFILSPTKSQVINPDEEFVLLESDDLNYSPVEIQLIAFHRILRSSFVYTFCPN GYIGRTTAYEIGRVVERKIKLFFSEAPKDLPIFLPQNSIWSPKDFSKYFLTNGKLPETLEAGSKTLSEKLHNDLFLGKYQ D >Mature_161_residues MQGSIIGSFRKYYREIRGVIDLFESVGIFILSPTKSQVINPDEEFVLLESDDLNYSPVEIQLIAFHRILRSSFVYTFCPN GYIGRTTAYEIGRVVERKIKLFFSEAPKDLPIFLPQNSIWSPKDFSKYFLTNGKLPETLEAGSKTLSEKLHNDLFLGKYQ D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18543; Mature: 18543
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGSIIGSFRKYYREIRGVIDLFESVGIFILSPTKSQVINPDEEFVLLESDDLNYSPVEI CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCCCEEEEECCCCCCCCEEE QLIAFHRILRSSFVYTFCPNGYIGRTTAYEIGRVVERKIKLFFSEAPKDLPIFLPQNSIW HHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC SPKDFSKYFLTNGKLPETLEAGSKTLSEKLHNDLFLGKYQD CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQGSIIGSFRKYYREIRGVIDLFESVGIFILSPTKSQVINPDEEFVLLESDDLNYSPVEI CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHCCCCCCCEEEEECCCCCCCCEEE QLIAFHRILRSSFVYTFCPNGYIGRTTAYEIGRVVERKIKLFFSEAPKDLPIFLPQNSIW HHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC SPKDFSKYFLTNGKLPETLEAGSKTLSEKLHNDLFLGKYQD CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA