Click here to switch to the map view.

The map label for this gene is 17230062

Identifier: 17230062

GI number: 17230062

Start: 3071340

End: 3072188

Strand: Direct

Name: 17230062

Synonym: alr2570

Alternate gene names: NA

Gene position: 3071340-3072188 (Clockwise)

Preceding gene: 17230061

Following gene: 17230064

Centisome position: 47.89

GC content: 44.17

Gene sequence:

>849_bases
ATGATGCACTTGCTGATGATTTTGACAGCTTTGGTGGTTTCGTGGATTTTCAGAAGTTCTTGGACTAACCCCCAAGACAA
TTGGGATGCACGGTGGCAAAGAACATTGTTTTTCTTTCTGTTTCCACCGTTGTTAATTTTGATGACAGCGATCGCTCTCT
TATTTATGGGGCCGCAAGGCAAAATGGGAGGACTATATACAGGTTGGTTCAGCTATGCACTAGCTTTAACTTTTCTGGGA
ATTTTCTCTTGTTTGTTTGCCACACTAGCTATTCAAGGCTGGCGATCACTACAATCCGCCCGCCACTGCCCTTTAGTTCA
TCTTGAAGGTAAACAAGTCAGGCTACTCAACACAGCAGCCCTATTTGCTGGACAAATTGGTTTCTGGCAACCCGAACTTG
TAGTTAGTCAAGGATTACTACAAACGCTGTCTCCCAACCATGTAGAAAGCGTTCTCGCCCACGAACAAGGACATTTTTAT
TATCGGGACACCTTTTGGTTTTTCTGGCTGGGTTGGGTGCGTTCTTGCACTGCTTGGCTACCAAATACAGATGCTTTGTG
GCAAGAACTTTTAGTTTTGCGCGAACTTCGTGCCGATAGTTACGCCGCATCCCAAGTTGATCCCCTGTTACTAGCAGAAT
CACTGTTATTAGTGGTTAGTAATGGTTCTGTATTTTCACAATCAGAAATTTGCTGTGCAGCTTTGGGTGATAGTGTAGGC
GATCGATTGGAACAAAGAATAGAAGCCTTATTAGCACCACCAAATCACACCCCAGAAGCCAAATTCCCATCTTGGCATGG
TTTTATTTTGGCGCTGCTGCCCTTACTAACTGTCATATTTCACACTTGA

Upstream 100 bases:

>100_bases
TAGTGGCAGCTTTTGCTGATAGCCTTGATGAAGCAGCTAGCGAACAAATAGAAGCGATCGCCAAACGTATTCAAGCTGCG
CGCCAAGCCAGGGAGGAACA

Downstream 100 bases:

>100_bases
ACAAAAATGTGGAGCGCAGCGTCAGCATTCAACTAAGGCTTTGTGATCCATTTTCATTAAAAAATAACCAAAATGTAGGG
TGCGTCAGTGCGAGAAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MMHLLMILTALVVSWIFRSSWTNPQDNWDARWQRTLFFFLFPPLLILMTAIALLFMGPQGKMGGLYTGWFSYALALTFLG
IFSCLFATLAIQGWRSLQSARHCPLVHLEGKQVRLLNTAALFAGQIGFWQPELVVSQGLLQTLSPNHVESVLAHEQGHFY
YRDTFWFFWLGWVRSCTAWLPNTDALWQELLVLRELRADSYAASQVDPLLLAESLLLVVSNGSVFSQSEICCAALGDSVG
DRLEQRIEALLAPPNHTPEAKFPSWHGFILALLPLLTVIFHT

Sequences:

>Translated_282_residues
MMHLLMILTALVVSWIFRSSWTNPQDNWDARWQRTLFFFLFPPLLILMTAIALLFMGPQGKMGGLYTGWFSYALALTFLG
IFSCLFATLAIQGWRSLQSARHCPLVHLEGKQVRLLNTAALFAGQIGFWQPELVVSQGLLQTLSPNHVESVLAHEQGHFY
YRDTFWFFWLGWVRSCTAWLPNTDALWQELLVLRELRADSYAASQVDPLLLAESLLLVVSNGSVFSQSEICCAALGDSVG
DRLEQRIEALLAPPNHTPEAKFPSWHGFILALLPLLTVIFHT
>Mature_282_residues
MMHLLMILTALVVSWIFRSSWTNPQDNWDARWQRTLFFFLFPPLLILMTAIALLFMGPQGKMGGLYTGWFSYALALTFLG
IFSCLFATLAIQGWRSLQSARHCPLVHLEGKQVRLLNTAALFAGQIGFWQPELVVSQGLLQTLSPNHVESVLAHEQGHFY
YRDTFWFFWLGWVRSCTAWLPNTDALWQELLVLRELRADSYAASQVDPLLLAESLLLVVSNGSVFSQSEICCAALGDSVG
DRLEQRIEALLAPPNHTPEAKFPSWHGFILALLPLLTVIFHT

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31910; Mature: 31910

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHLLMILTALVVSWIFRSSWTNPQDNWDARWQRTLFFFLFPPLLILMTAIALLFMGPQG
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KMGGLYTGWFSYALALTFLGIFSCLFATLAIQGWRSLQSARHCPLVHLEGKQVRLLNTAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEHHHHHH
LFAGQIGFWQPELVVSQGLLQTLSPNHVESVLAHEQGHFYYRDTFWFFWLGWVRSCTAWL
HHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCC
PNTDALWQELLVLRELRADSYAASQVDPLLLAESLLLVVSNGSVFSQSEICCAALGDSVG
CCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHEECCCCCCCHHHHHHHHCCHHH
DRLEQRIEALLAPPNHTPEAKFPSWHGFILALLPLLTVIFHT
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMHLLMILTALVVSWIFRSSWTNPQDNWDARWQRTLFFFLFPPLLILMTAIALLFMGPQG
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KMGGLYTGWFSYALALTFLGIFSCLFATLAIQGWRSLQSARHCPLVHLEGKQVRLLNTAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEHHHHHH
LFAGQIGFWQPELVVSQGLLQTLSPNHVESVLAHEQGHFYYRDTFWFFWLGWVRSCTAWL
HHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCC
PNTDALWQELLVLRELRADSYAASQVDPLLLAESLLLVVSNGSVFSQSEICCAALGDSVG
CCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHEECCCCCCCHHHHHHHHCCHHH
DRLEQRIEALLAPPNHTPEAKFPSWHGFILALLPLLTVIFHT
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA