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The map label for this gene is 17230010

Identifier: 17230010

GI number: 17230010

Start: 3025533

End: 3026144

Strand: Direct

Name: 17230010

Synonym: alr2518

Alternate gene names: NA

Gene position: 3025533-3026144 (Clockwise)

Preceding gene: 17230009

Following gene: 17230012

Centisome position: 47.17

GC content: 42.32

Gene sequence:

>612_bases
ATGCAAGGTAGGGATTGGCTCTTGACAGGAGACGGTCAATATCAAGTGTGTAAATCTGCGAGAAGTTGGGATTTATTACA
AGAGAATTATCGTCTTTATCGGTTTTTGACTGAGATGGAAGATGTTCTCAATCAGGTAAGCGATGAATCTACTCGTTTAC
CTGAAATCCGAATGCTCGTCAGGCGCTTGATTGTCAATTCGTACTGGGTGCGGAGTCAGTATTTAGCACCATCTCCAACC
ACCGGAACCTCTGTTCTCCTCCTATACGATGAATTGGGTTTTCCCTTGACTGTGCAAACAGTAACTTTTGCACCAGGAAC
CCTATCTACTATTCATAATCATGGAACTTGGGGAGTTGTCGCGGTCTTAAAAGGGCAAGAAAAAAATACTGTTTGGCGAC
ACACAAAAACCCCAGATTCTCAAGACAAAATTGAGGCGATGGGAGAAATTACTTTATCACCAGGGGACATGATTAGCTTC
ACTCCCGACGCAATTCATAGCGTCCAAGCAATAGGTGATGAACCAACTGTCACCTTTAATATCTATGGCGAAACTGACCC
CAAACAAAGATTTGAGTTTGATGCAGTTACCCATAATGCTAAAAAGTTTTAA

Upstream 100 bases:

>100_bases
AAGTTATAGTGCCAACTTTCCCCACAACTGATTCGCTGCCGAATGTTAACACTCCCATATTTGTGCTTCCCAGATTTTCT
TAACCGAGAGTTTAAATATC

Downstream 100 bases:

>100_bases
GGGGGAGACAAAAGGTAGGAATTAATCATGAACGCCGTGTGCAACTTTTTCAAACCTAACCCCCAACCCCTTCCCTTGTA
GGGAAGGGGAGCAAGAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Cysteine Dioxygenase Type I; Cysteine Dioxygenase Type I Superfamily; Cupin Region; Metal-Dependent Of Double-Stranded Beta Helix Superfamily

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MQGRDWLLTGDGQYQVCKSARSWDLLQENYRLYRFLTEMEDVLNQVSDESTRLPEIRMLVRRLIVNSYWVRSQYLAPSPT
TGTSVLLLYDELGFPLTVQTVTFAPGTLSTIHNHGTWGVVAVLKGQEKNTVWRHTKTPDSQDKIEAMGEITLSPGDMISF
TPDAIHSVQAIGDEPTVTFNIYGETDPKQRFEFDAVTHNAKKF

Sequences:

>Translated_203_residues
MQGRDWLLTGDGQYQVCKSARSWDLLQENYRLYRFLTEMEDVLNQVSDESTRLPEIRMLVRRLIVNSYWVRSQYLAPSPT
TGTSVLLLYDELGFPLTVQTVTFAPGTLSTIHNHGTWGVVAVLKGQEKNTVWRHTKTPDSQDKIEAMGEITLSPGDMISF
TPDAIHSVQAIGDEPTVTFNIYGETDPKQRFEFDAVTHNAKKF
>Mature_203_residues
MQGRDWLLTGDGQYQVCKSARSWDLLQENYRLYRFLTEMEDVLNQVSDESTRLPEIRMLVRRLIVNSYWVRSQYLAPSPT
TGTSVLLLYDELGFPLTVQTVTFAPGTLSTIHNHGTWGVVAVLKGQEKNTVWRHTKTPDSQDKIEAMGEITLSPGDMISF
TPDAIHSVQAIGDEPTVTFNIYGETDPKQRFEFDAVTHNAKKF

Specific function: Unknown

COG id: COG5553

COG function: function code R; Predicted metal-dependent enzyme of the double-stranded beta helix superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23073; Mature: 23073

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGRDWLLTGDGQYQVCKSARSWDLLQENYRLYRFLTEMEDVLNQVSDESTRLPEIRMLV
CCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RRLIVNSYWVRSQYLAPSPTTGTSVLLLYDELGFPLTVQTVTFAPGTLSTIHNHGTWGVV
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHCCCCEEEE
AVLKGQEKNTVWRHTKTPDSQDKIEAMGEITLSPGDMISFTPDAIHSVQAIGDEPTVTFN
EEEECCCCCCEEEECCCCCCHHHHHHHHEEEECCCCEEEECHHHHHHHHHCCCCCEEEEE
IYGETDPKQRFEFDAVTHNAKKF
EECCCCHHHHEEHHHHCCCCCCC
>Mature Secondary Structure
MQGRDWLLTGDGQYQVCKSARSWDLLQENYRLYRFLTEMEDVLNQVSDESTRLPEIRMLV
CCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RRLIVNSYWVRSQYLAPSPTTGTSVLLLYDELGFPLTVQTVTFAPGTLSTIHNHGTWGVV
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCHHHHHCCCCEEEE
AVLKGQEKNTVWRHTKTPDSQDKIEAMGEITLSPGDMISFTPDAIHSVQAIGDEPTVTFN
EEEECCCCCCEEEECCCCCCHHHHHHHHEEEECCCCEEEECHHHHHHHHHCCCCCEEEEE
IYGETDPKQRFEFDAVTHNAKKF
EECCCCHHHHEEHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA