| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229976
Identifier: 17229976
GI number: 17229976
Start: 2984474
End: 2985220
Strand: Direct
Name: 17229976
Synonym: alr2484
Alternate gene names: NA
Gene position: 2984474-2985220 (Clockwise)
Preceding gene: 17229975
Following gene: 17229977
Centisome position: 46.53
GC content: 38.69
Gene sequence:
>747_bases ATGCCCGGACGCAACCAAAAAAAGTTTTCAACTTCGTTAAATCAACAACCTTTAGCCGATTTTAAGGTTGGTGTTGATAA TGTAATTTTTTCTGTAGATACTGAAAAAAATCGGCTGTTAGTTCTGTTAGTAATGCGACAGCAAGAACCATTTTTAAATT ATTGGAGTCTTCCTGGTACTTTGGTGCGAGAAGGAGAGTCTTTAGAAGACGCTGCTTATCGCATTATGGCAGAGAAAATT AGAGTCAAAAATCTCTATTTGGAACAGCTATATACATTTGGCGGCCCCAATCGTGACCCAAGGGAAGCAACTGGCAGTTA TGGTGTACGTTACCTATCCGTTAGTTATTTTGCTCTCGTCAGATTTGAGGAAGCAGAATTAATTGCTGATGGCGTGACTG GTATTGCTTGGTATCCAGTCAAGCAAGTGCCAAAATTATCTTTTGACCATAATGAAATTTTGGCTTATGGACATCGCCGC TTACGCAATAAATTAGAGTACAGTCCAGTTGCATTTGAAGTCTTACCGGAAATGTTTACTTTGAATGATTTATATCAGTT GTACACAACAGTTTTAGGCGAAAATTTCTCTGATTATTCCAACTTTCGAGCGCGTTTATTGAAGTTGGGATTTTTATCTG ATACCGGAATCAAAGTATCACGAGGTGCAGGTCGTCCTGCGAGTTTATATAAGTTTGATGCTGAAGCCTTTTCCCCTTTC AAGGACAAACCTTTGGTATTTATCTAA
Upstream 100 bases:
>100_bases CAGGTCTAGATGTTTCCTCAACAGCATATCGTGAACGTGGAGAAACTGAAGCTCTCACCCCCCCTATAGTCGAATACATT CATCAACAGCATTTGTACAA
Downstream 100 bases:
>100_bases TTGGTAATTATTGCCTAAATTATTGTAGAGAGGTTGCAATGCAACCTCTCTACCAAAAACCTATTAATTAAAAACAATGA AAATAGCGATCGCTCAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Hydrolase; ADP-Ribose Pyrophosphatase; NUDIX Family Hydrolase; Nudix Hydrolase; MutT/Nudix Family Protein; Hydrolase NUDIX Family; Hydrolase NUDIX Family Protein; Hydrolase; NUDIX Domain-Containing Protein; DNA Hydrolase With MutT Domain-Containing Protein; Phosphohydrolase; MutT/NUDIX Family DNA Hydrolase; Hydrolase MutT/Nudix Family Protein; MutT/NUDIX Family Protein; Nudix Hydrolase Family Protein; MutT/Nudix Family DNA Hydrolase; NTP Pyrophosphohydrolase; Hydrolase Nudix Family; Nudix Superfamily Hydrolase; Protein Containing NUDIX Domain; MutT/Nudix-Like Protein; DNA Hydrolase Protein MutT/Nudix Family; Acetohydroxy Acid Isomeroreductase
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPGRNQKKFSTSLNQQPLADFKVGVDNVIFSVDTEKNRLLVLLVMRQQEPFLNYWSLPGTLVREGESLEDAAYRIMAEKI RVKNLYLEQLYTFGGPNRDPREATGSYGVRYLSVSYFALVRFEEAELIADGVTGIAWYPVKQVPKLSFDHNEILAYGHRR LRNKLEYSPVAFEVLPEMFTLNDLYQLYTTVLGENFSDYSNFRARLLKLGFLSDTGIKVSRGAGRPASLYKFDAEAFSPF KDKPLVFI
Sequences:
>Translated_248_residues MPGRNQKKFSTSLNQQPLADFKVGVDNVIFSVDTEKNRLLVLLVMRQQEPFLNYWSLPGTLVREGESLEDAAYRIMAEKI RVKNLYLEQLYTFGGPNRDPREATGSYGVRYLSVSYFALVRFEEAELIADGVTGIAWYPVKQVPKLSFDHNEILAYGHRR LRNKLEYSPVAFEVLPEMFTLNDLYQLYTTVLGENFSDYSNFRARLLKLGFLSDTGIKVSRGAGRPASLYKFDAEAFSPF KDKPLVFI >Mature_247_residues PGRNQKKFSTSLNQQPLADFKVGVDNVIFSVDTEKNRLLVLLVMRQQEPFLNYWSLPGTLVREGESLEDAAYRIMAEKIR VKNLYLEQLYTFGGPNRDPREATGSYGVRYLSVSYFALVRFEEAELIADGVTGIAWYPVKQVPKLSFDHNEILAYGHRRL RNKLEYSPVAFEVLPEMFTLNDLYQLYTTVLGENFSDYSNFRARLLKLGFLSDTGIKVSRGAGRPASLYKFDAEAFSPFK DKPLVFI
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28410; Mature: 28279
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRNQKKFSTSLNQQPLADFKVGVDNVIFSVDTEKNRLLVLLVMRQQEPFLNYWSLPGT CCCCCCCHHHHCCCCCCCHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCEECCCCCH LVREGESLEDAAYRIMAEKIRVKNLYLEQLYTFGGPNRDPREATGSYGVRYLSVSYFALV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEHEEEEEHEEE RFEEAELIADGVTGIAWYPVKQVPKLSFDHNEILAYGHRRLRNKLEYSPVAFEVLPEMFT EEHHHHHHHCCCCCEEEECHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LNDLYQLYTTVLGENFSDYSNFRARLLKLGFLSDTGIKVSRGAGRPASLYKFDAEAFSPF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHEEECHHHCCCC KDKPLVFI CCCCCEEC >Mature Secondary Structure PGRNQKKFSTSLNQQPLADFKVGVDNVIFSVDTEKNRLLVLLVMRQQEPFLNYWSLPGT CCCCCCHHHHCCCCCCCHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCEECCCCCH LVREGESLEDAAYRIMAEKIRVKNLYLEQLYTFGGPNRDPREATGSYGVRYLSVSYFALV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEHEEEEEHEEE RFEEAELIADGVTGIAWYPVKQVPKLSFDHNEILAYGHRRLRNKLEYSPVAFEVLPEMFT EEHHHHHHHCCCCCEEEECHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LNDLYQLYTTVLGENFSDYSNFRARLLKLGFLSDTGIKVSRGAGRPASLYKFDAEAFSPF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHEEECHHHCCCC KDKPLVFI CCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA