| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229968
Identifier: 17229968
GI number: 17229968
Start: 2972553
End: 2974469
Strand: Direct
Name: 17229968
Synonym: alr2476
Alternate gene names: NA
Gene position: 2972553-2974469 (Clockwise)
Preceding gene: 17229967
Following gene: 17229970
Centisome position: 46.35
GC content: 31.04
Gene sequence:
>1917_bases ATGTCAATTTCTAATGAAACTAAACAATTTATTCAATGGATACAATCTTTTGATTATCGTGTTTTAAAAAACAAAGATGA TGTCGAGATAAATTTTATTGTACCTATGTTTCGTCATCTCTGTTATCCCAAGACATATTCGGCTGGTAACTATCCTTTAA ATACTCAAAACATTGAAAAAAATCTAGAAAGTATTTATATATATTTCTCTACTGATGATGTTATTAAACAAAATGCTGAA ACAGCTTTAATCATTGCTATATATTTAGAGCCAAATTCTAATAATTTTCCAGAAGCTATCGAACGCGCCAAGTTTTATAG TACTTATTTAAAACCTTTATACTTTTTAGTGACTAATGGCTATCATGTGAGGATTTTTAAATATTTTATCTACCACAAAG AAGAATTAATCTTTGACAAAAGTGTCGATTCTTTAAAAAACACCCATATAGCCACAGAATTCTATAATAACTTTAATTTT AATTTAGTTAAAAATATTGATAAAAACACAGCTAATATTTCTAAATATACACAATATAGCCTCATAGAAAAATCATTAAG ACGGTACAATTTACAGGAAATTGTCGCTAATACTGACTTTAGAACCTCTACCTTTAGAGAAGGCGATCGCCTGACTGTTG TCAAGCCTAAAGTAGTTATAGAGTGTAACTTACCTAAAGCTTCTGGTGAAGGTAATTGTCAAATACAATTTAGCAGCGTT ATCTTAAGAGGACTAAAGGTTAGCTTAAATCATCAATATATTTTAGGTAACCTCATGACAGGCTTAAATACCCGTCCAGA ATGGGGTTGCCGGAGTTTTCTTAAACAATTAGATGATAACGCTTTTGAAGTTAATCTAGGTCAAACAACAGTTATATTAT CTGACTTAGAAACAGCAGACTTATGTTTATGTATCGATATAGTTGCTCAAGAATATAAAAAAGCGATTATTGCTTTTGAA AATGCTTTAGAAACTTGGGATTTTGAATTTACAGATTTTTTAGGTGTGCGTGGAGTTAATCTGTTTTCTGTAGATGCAAA ATTATGGCGATTAATGCACAACTTCGCCAATGAGTTTAACTATGTGCAAGGTAAATCAGAGTGGCATTTATTTCAACAGG AAGATATTTCCATTCGTGTTAGTCGTGGGATTCGGGATCATGCTTTTATTTTACCCAAACCTGTCAATTATTTATCTATA TTACCAAACGGCATAATTAACATAGTTTATGAAATAAATGATGTGCATCTACAATCTTTGGAAAAAGGCGAAATGAATAC ATGGCAGCAAGATATCGGCCCACGGGGTACTTGGACAGCTAAATACACTCAACAATGGCTATTAAATCAATTTATTCCTA AAGTTATTGATTATTATTCGGCTAAATATCCGTTGTCTGAAGAGGAATTATTAAATAATATATTGAATACCGAAAATAAC AGGATTTCTATTACAAAAATCAATGAAATTCAAGAGTTAATTCCTTATCTCCAAGATATACAATCTTGGCTAAATATATA TATAGAAAATAGTTCGACTACATTATTGCGGGTATATTACAGGGCATTCACTAATTTAGTACGGAATACAGATTCATCAA TAGAAGGGATGGATTATATTATCCGTAACTTATCTTTAATGGAAACTGATAATACAAAAGATAGAGTTAAAAGTAATTTC CAAAAATGGAGTTTTAAAGACGTAATTTATTATTTAGATGCTCAAGTGGGTAGAATTAATAATTATCAACATGAAAATAG TTTTAAAGCAGTTTTAATTACTCGCATTTTTATCTGGATTATCGAACATGGCAAAATAAGCTGCTCCCAAGCCCAGTTAA ATGCTGCAAAGCAAGCCTTACTACCACTGTGGGAGCAAAGCCGCTTTGAAATGCGCCATGTTTATCCAAATCGTTAA
Upstream 100 bases:
>100_bases ATAATGTTGACCTTCGCACCCATCATAGTTAAACAAGATAGAGGCACAGTCAGGCTGTGCCTTTCTCAGTTTCTATTAAA GTGCTTATTGTAACTATATA
Downstream 100 bases:
>100_bases TTTTGTTCACCTCTAGAGAAAAGCATATTCCCTATGACCCGTTTCCCATAAATGCCCAAATTACGGCGTAGTTGGTTCGG AAATACTTAGGGTATTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 638; Mature: 637
Protein sequence:
>638_residues MSISNETKQFIQWIQSFDYRVLKNKDDVEINFIVPMFRHLCYPKTYSAGNYPLNTQNIEKNLESIYIYFSTDDVIKQNAE TALIIAIYLEPNSNNFPEAIERAKFYSTYLKPLYFLVTNGYHVRIFKYFIYHKEELIFDKSVDSLKNTHIATEFYNNFNF NLVKNIDKNTANISKYTQYSLIEKSLRRYNLQEIVANTDFRTSTFREGDRLTVVKPKVVIECNLPKASGEGNCQIQFSSV ILRGLKVSLNHQYILGNLMTGLNTRPEWGCRSFLKQLDDNAFEVNLGQTTVILSDLETADLCLCIDIVAQEYKKAIIAFE NALETWDFEFTDFLGVRGVNLFSVDAKLWRLMHNFANEFNYVQGKSEWHLFQQEDISIRVSRGIRDHAFILPKPVNYLSI LPNGIINIVYEINDVHLQSLEKGEMNTWQQDIGPRGTWTAKYTQQWLLNQFIPKVIDYYSAKYPLSEEELLNNILNTENN RISITKINEIQELIPYLQDIQSWLNIYIENSSTTLLRVYYRAFTNLVRNTDSSIEGMDYIIRNLSLMETDNTKDRVKSNF QKWSFKDVIYYLDAQVGRINNYQHENSFKAVLITRIFIWIIEHGKISCSQAQLNAAKQALLPLWEQSRFEMRHVYPNR
Sequences:
>Translated_638_residues MSISNETKQFIQWIQSFDYRVLKNKDDVEINFIVPMFRHLCYPKTYSAGNYPLNTQNIEKNLESIYIYFSTDDVIKQNAE TALIIAIYLEPNSNNFPEAIERAKFYSTYLKPLYFLVTNGYHVRIFKYFIYHKEELIFDKSVDSLKNTHIATEFYNNFNF NLVKNIDKNTANISKYTQYSLIEKSLRRYNLQEIVANTDFRTSTFREGDRLTVVKPKVVIECNLPKASGEGNCQIQFSSV ILRGLKVSLNHQYILGNLMTGLNTRPEWGCRSFLKQLDDNAFEVNLGQTTVILSDLETADLCLCIDIVAQEYKKAIIAFE NALETWDFEFTDFLGVRGVNLFSVDAKLWRLMHNFANEFNYVQGKSEWHLFQQEDISIRVSRGIRDHAFILPKPVNYLSI LPNGIINIVYEINDVHLQSLEKGEMNTWQQDIGPRGTWTAKYTQQWLLNQFIPKVIDYYSAKYPLSEEELLNNILNTENN RISITKINEIQELIPYLQDIQSWLNIYIENSSTTLLRVYYRAFTNLVRNTDSSIEGMDYIIRNLSLMETDNTKDRVKSNF QKWSFKDVIYYLDAQVGRINNYQHENSFKAVLITRIFIWIIEHGKISCSQAQLNAAKQALLPLWEQSRFEMRHVYPNR >Mature_637_residues SISNETKQFIQWIQSFDYRVLKNKDDVEINFIVPMFRHLCYPKTYSAGNYPLNTQNIEKNLESIYIYFSTDDVIKQNAET ALIIAIYLEPNSNNFPEAIERAKFYSTYLKPLYFLVTNGYHVRIFKYFIYHKEELIFDKSVDSLKNTHIATEFYNNFNFN LVKNIDKNTANISKYTQYSLIEKSLRRYNLQEIVANTDFRTSTFREGDRLTVVKPKVVIECNLPKASGEGNCQIQFSSVI LRGLKVSLNHQYILGNLMTGLNTRPEWGCRSFLKQLDDNAFEVNLGQTTVILSDLETADLCLCIDIVAQEYKKAIIAFEN ALETWDFEFTDFLGVRGVNLFSVDAKLWRLMHNFANEFNYVQGKSEWHLFQQEDISIRVSRGIRDHAFILPKPVNYLSIL PNGIINIVYEINDVHLQSLEKGEMNTWQQDIGPRGTWTAKYTQQWLLNQFIPKVIDYYSAKYPLSEEELLNNILNTENNR ISITKINEIQELIPYLQDIQSWLNIYIENSSTTLLRVYYRAFTNLVRNTDSSIEGMDYIIRNLSLMETDNTKDRVKSNFQ KWSFKDVIYYLDAQVGRINNYQHENSFKAVLITRIFIWIIEHGKISCSQAQLNAAKQALLPLWEQSRFEMRHVYPNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74861; Mature: 74730
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISNETKQFIQWIQSFDYRVLKNKDDVEINFIVPMFRHLCYPKTYSAGNYPLNTQNIEK CCCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCHHHHHC NLESIYIYFSTDDVIKQNAETALIIAIYLEPNSNNFPEAIERAKFYSTYLKPLYFLVTNG CCEEEEEEECCCHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECC YHVRIFKYFIYHKEELIFDKSVDSLKNTHIATEFYNNFNFNLVKNIDKNTANISKYTQYS EEEEEEEEEHHHHHHHEECCCHHHHHCCEEEHHHHCCCCCEEEECCCCCCCCHHHHHHHH LIEKSLRRYNLQEIVANTDFRTSTFREGDRLTVVKPKVVIECNLPKASGEGNCQIQFSSV HHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEEHHH ILRGLKVSLNHQYILGNLMTGLNTRPEWGCRSFLKQLDDNAFEVNLGQTTVILSDLETAD HHHHHEEECCCEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHH LCLCIDIVAQEYKKAIIAFENALETWDFEFTDFLGVRGVNLFSVDAKLWRLMHNFANEFN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCC YVQGKSEWHLFQQEDISIRVSRGIRDHAFILPKPVNYLSILPNGIINIVYEINDVHLQSL CCCCCCCEEEEECCCCEEEEECCCCCCEEECCCCCHHHHHCCCCCEEEEEEECHHHHHHH EKGEMNTWQQDIGPRGTWTAKYTQQWLLNQFIPKVIDYYSAKYPLSEEELLNNILNTENN CCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC RISITKINEIQELIPYLQDIQSWLNIYIENSSTTLLRVYYRAFTNLVRNTDSSIEGMDYI EEEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH IRNLSLMETDNTKDRVKSNFQKWSFKDVIYYLDAQVGRINNYQHENSFKAVLITRIFIWI HHCCEEEECCCCHHHHHHHHHHCCHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHH IEHGKISCSQAQLNAAKQALLPLWEQSRFEMRHVYPNR HHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure SISNETKQFIQWIQSFDYRVLKNKDDVEINFIVPMFRHLCYPKTYSAGNYPLNTQNIEK CCCHHHHHHHHHHHHCCEEEECCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCHHHHHC NLESIYIYFSTDDVIKQNAETALIIAIYLEPNSNNFPEAIERAKFYSTYLKPLYFLVTNG CCEEEEEEECCCHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECC YHVRIFKYFIYHKEELIFDKSVDSLKNTHIATEFYNNFNFNLVKNIDKNTANISKYTQYS EEEEEEEEEHHHHHHHEECCCHHHHHCCEEEHHHHCCCCCEEEECCCCCCCCHHHHHHHH LIEKSLRRYNLQEIVANTDFRTSTFREGDRLTVVKPKVVIECNLPKASGEGNCQIQFSSV HHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEEHHH ILRGLKVSLNHQYILGNLMTGLNTRPEWGCRSFLKQLDDNAFEVNLGQTTVILSDLETAD HHHHHEEECCCEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHH LCLCIDIVAQEYKKAIIAFENALETWDFEFTDFLGVRGVNLFSVDAKLWRLMHNFANEFN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCC YVQGKSEWHLFQQEDISIRVSRGIRDHAFILPKPVNYLSILPNGIINIVYEINDVHLQSL CCCCCCCEEEEECCCCEEEEECCCCCCEEECCCCCHHHHHCCCCCEEEEEEECHHHHHHH EKGEMNTWQQDIGPRGTWTAKYTQQWLLNQFIPKVIDYYSAKYPLSEEELLNNILNTENN CCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC RISITKINEIQELIPYLQDIQSWLNIYIENSSTTLLRVYYRAFTNLVRNTDSSIEGMDYI EEEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH IRNLSLMETDNTKDRVKSNFQKWSFKDVIYYLDAQVGRINNYQHENSFKAVLITRIFIWI HHCCEEEECCCCHHHHHHHHHHCCHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHH IEHGKISCSQAQLNAAKQALLPLWEQSRFEMRHVYPNR HHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA