| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228872
Identifier: 17228872
GI number: 17228872
Start: 1630281
End: 1631411
Strand: Direct
Name: 17228872
Synonym: alr1377
Alternate gene names: NA
Gene position: 1630281-1631411 (Clockwise)
Preceding gene: 17228871
Following gene: 17228873
Centisome position: 25.42
GC content: 43.24
Gene sequence:
>1131_bases ATGTCGTCATTCTGTGTTCCACCCACTCAACTTTGGTTAGAGGTATCTGCTGGCATTCAAGACCAATCTTGGCAGCAAAG CCAAACTTGCCTTAATCCCAGTGGTCGTTGGCATATTTTTCTCAACCAAGTATGCCTGAGTACCTTTTTACCTTGGCTGC AAGCTGAGTACTCACCAGAAGCTACTCTTGCCACAGTTCCCAATAGTTGGGAATTCGTCAACGGGACTGCTATAAATTTA GATACAAAACGCCTCATCCTCATTCCCGATAAAAGCCTAGACACAAGAGAATTTCATGTCCCCCAAGAATGGATAGATAT TCCTCAATGGGCAGGAGATTATTATCTAGCAGTACAAGTCAGTCCAGACGGGGAATGGCTAAGAATTTGGGGCTATACCA CCCATGAGCAATTGAAAAATCAAGGTAGTTACGATCCTCAAGAAAGGACTTACTCCTTAAAAGCCTATCAAATGATTGAG GATTTGAATGTACTTTGGGTAGTACGTCAACTATATCCTGAAGAACAAACACAAGTAGCGATCGCTCCTTTAGCTGAGTT ATCACCCACCCAAGTAGATAACCTCTGGCAAAGGTTAAGTAATCCAGCAATTACGAACCCACGCTTAGAACTGCCCTTTG AAATCTGGGGGGCTTTATTAGCTAAGTCACAACAACCACAACCAAAATCAGCACTTGTCAACTTGCGTCAGTGGTTACAA AATACCTTGACAAATAGCTGGCAAACCGTCGAAACTCTTCTGGGAACACAGCCAGATTTTGCCTTCAGCTTTCGTCAAGC CGATGATACAGCTGAACGATCAATCCAGCGCGTTAAGGTAATCGACCTACCAAGCGGTCAAACCATAGTGCTAATGTTGA CTTTGACACTAGAAACAGATGGTAGAGTAGGAATCCGCGTCCAATTGTCTCCCAGAGAACGAGGAATTTATTTACCTGAG AATATGAGATTAGAGTTAATTTCTGCCTCAGGGCAAGTTGTCCAATCAGTAGAAGCACGAGAAACAGACAACTCCATCCA ACTTAAACGCTTCCGATGTCCACAAAACACCCGCTTTAGCCTTCAGCTAATTCTCGATGATTTCAGTTTTGTTGAAGAGT TTGAAAGTTAG
Upstream 100 bases:
>100_bases ATATTTCCCCGACTTCCAACGTGGTTAAGCATATTAGCGCAATATTAGAGGAATGGTTACAGAATTATTTCCGTAATCTC TCTGCAAAGGAGTAGTAATT
Downstream 100 bases:
>100_bases TTATGGCGTTTCTTAATCTACTGGCATACTGAGTACATGAGTAAACTGATCGTCCTAAATTTAGGAAAAGGAAACTTACA CCAAGGATTTCCGGCGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSSFCVPPTQLWLEVSAGIQDQSWQQSQTCLNPSGRWHIFLNQVCLSTFLPWLQAEYSPEATLATVPNSWEFVNGTAINL DTKRLILIPDKSLDTREFHVPQEWIDIPQWAGDYYLAVQVSPDGEWLRIWGYTTHEQLKNQGSYDPQERTYSLKAYQMIE DLNVLWVVRQLYPEEQTQVAIAPLAELSPTQVDNLWQRLSNPAITNPRLELPFEIWGALLAKSQQPQPKSALVNLRQWLQ NTLTNSWQTVETLLGTQPDFAFSFRQADDTAERSIQRVKVIDLPSGQTIVLMLTLTLETDGRVGIRVQLSPRERGIYLPE NMRLELISASGQVVQSVEARETDNSIQLKRFRCPQNTRFSLQLILDDFSFVEEFES
Sequences:
>Translated_376_residues MSSFCVPPTQLWLEVSAGIQDQSWQQSQTCLNPSGRWHIFLNQVCLSTFLPWLQAEYSPEATLATVPNSWEFVNGTAINL DTKRLILIPDKSLDTREFHVPQEWIDIPQWAGDYYLAVQVSPDGEWLRIWGYTTHEQLKNQGSYDPQERTYSLKAYQMIE DLNVLWVVRQLYPEEQTQVAIAPLAELSPTQVDNLWQRLSNPAITNPRLELPFEIWGALLAKSQQPQPKSALVNLRQWLQ NTLTNSWQTVETLLGTQPDFAFSFRQADDTAERSIQRVKVIDLPSGQTIVLMLTLTLETDGRVGIRVQLSPRERGIYLPE NMRLELISASGQVVQSVEARETDNSIQLKRFRCPQNTRFSLQLILDDFSFVEEFES >Mature_375_residues SSFCVPPTQLWLEVSAGIQDQSWQQSQTCLNPSGRWHIFLNQVCLSTFLPWLQAEYSPEATLATVPNSWEFVNGTAINLD TKRLILIPDKSLDTREFHVPQEWIDIPQWAGDYYLAVQVSPDGEWLRIWGYTTHEQLKNQGSYDPQERTYSLKAYQMIED LNVLWVVRQLYPEEQTQVAIAPLAELSPTQVDNLWQRLSNPAITNPRLELPFEIWGALLAKSQQPQPKSALVNLRQWLQN TLTNSWQTVETLLGTQPDFAFSFRQADDTAERSIQRVKVIDLPSGQTIVLMLTLTLETDGRVGIRVQLSPRERGIYLPEN MRLELISASGQVVQSVEARETDNSIQLKRFRCPQNTRFSLQLILDDFSFVEEFES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43228; Mature: 43097
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFCVPPTQLWLEVSAGIQDQSWQQSQTCLNPSGRWHIFLNQVCLSTFLPWLQAEYSPE CCCCCCCHHHEEEEEECCCCCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCC ATLATVPNSWEFVNGTAINLDTKRLILIPDKSLDTREFHVPQEWIDIPQWAGDYYLAVQV CEEEECCCCCEEECCEEEEECCCEEEEECCCCCCCCEEECCHHHHCCCCCCCCEEEEEEE SPDGEWLRIWGYTTHEQLKNQGSYDPQERTYSLKAYQMIEDLNVLWVVRQLYPEEQTQVA CCCCCEEEEEECCHHHHHHCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEE IAPLAELSPTQVDNLWQRLSNPAITNPRLELPFEIWGALLAKSQQPQPKSALVNLRQWLQ EEEHHHCCCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHH NTLTNSWQTVETLLGTQPDFAFSFRQADDTAERSIQRVKVIDLPSGQTIVLMLTLTLETD HHHCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHEEEEEEECCCCCEEEEEEEEEEECC GRVGIRVQLSPRERGIYLPENMRLELISASGQVVQSVEARETDNSIQLKRFRCPQNTRFS CCEEEEEEECCCCCCEECCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCEE LQLILDDFSFVEEFES EEEEEHHHHHHHHHCC >Mature Secondary Structure SSFCVPPTQLWLEVSAGIQDQSWQQSQTCLNPSGRWHIFLNQVCLSTFLPWLQAEYSPE CCCCCCHHHEEEEEECCCCCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCC ATLATVPNSWEFVNGTAINLDTKRLILIPDKSLDTREFHVPQEWIDIPQWAGDYYLAVQV CEEEECCCCCEEECCEEEEECCCEEEEECCCCCCCCEEECCHHHHCCCCCCCCEEEEEEE SPDGEWLRIWGYTTHEQLKNQGSYDPQERTYSLKAYQMIEDLNVLWVVRQLYPEEQTQVA CCCCCEEEEEECCHHHHHHCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEE IAPLAELSPTQVDNLWQRLSNPAITNPRLELPFEIWGALLAKSQQPQPKSALVNLRQWLQ EEEHHHCCCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHH NTLTNSWQTVETLLGTQPDFAFSFRQADDTAERSIQRVKVIDLPSGQTIVLMLTLTLETD HHHCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHEEEEEEECCCCCEEEEEEEEEEECC GRVGIRVQLSPRERGIYLPENMRLELISASGQVVQSVEARETDNSIQLKRFRCPQNTRFS CCEEEEEEECCCCCCEECCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCEE LQLILDDFSFVEEFES EEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA