Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17228872

Identifier: 17228872

GI number: 17228872

Start: 1630281

End: 1631411

Strand: Direct

Name: 17228872

Synonym: alr1377

Alternate gene names: NA

Gene position: 1630281-1631411 (Clockwise)

Preceding gene: 17228871

Following gene: 17228873

Centisome position: 25.42

GC content: 43.24

Gene sequence:

>1131_bases
ATGTCGTCATTCTGTGTTCCACCCACTCAACTTTGGTTAGAGGTATCTGCTGGCATTCAAGACCAATCTTGGCAGCAAAG
CCAAACTTGCCTTAATCCCAGTGGTCGTTGGCATATTTTTCTCAACCAAGTATGCCTGAGTACCTTTTTACCTTGGCTGC
AAGCTGAGTACTCACCAGAAGCTACTCTTGCCACAGTTCCCAATAGTTGGGAATTCGTCAACGGGACTGCTATAAATTTA
GATACAAAACGCCTCATCCTCATTCCCGATAAAAGCCTAGACACAAGAGAATTTCATGTCCCCCAAGAATGGATAGATAT
TCCTCAATGGGCAGGAGATTATTATCTAGCAGTACAAGTCAGTCCAGACGGGGAATGGCTAAGAATTTGGGGCTATACCA
CCCATGAGCAATTGAAAAATCAAGGTAGTTACGATCCTCAAGAAAGGACTTACTCCTTAAAAGCCTATCAAATGATTGAG
GATTTGAATGTACTTTGGGTAGTACGTCAACTATATCCTGAAGAACAAACACAAGTAGCGATCGCTCCTTTAGCTGAGTT
ATCACCCACCCAAGTAGATAACCTCTGGCAAAGGTTAAGTAATCCAGCAATTACGAACCCACGCTTAGAACTGCCCTTTG
AAATCTGGGGGGCTTTATTAGCTAAGTCACAACAACCACAACCAAAATCAGCACTTGTCAACTTGCGTCAGTGGTTACAA
AATACCTTGACAAATAGCTGGCAAACCGTCGAAACTCTTCTGGGAACACAGCCAGATTTTGCCTTCAGCTTTCGTCAAGC
CGATGATACAGCTGAACGATCAATCCAGCGCGTTAAGGTAATCGACCTACCAAGCGGTCAAACCATAGTGCTAATGTTGA
CTTTGACACTAGAAACAGATGGTAGAGTAGGAATCCGCGTCCAATTGTCTCCCAGAGAACGAGGAATTTATTTACCTGAG
AATATGAGATTAGAGTTAATTTCTGCCTCAGGGCAAGTTGTCCAATCAGTAGAAGCACGAGAAACAGACAACTCCATCCA
ACTTAAACGCTTCCGATGTCCACAAAACACCCGCTTTAGCCTTCAGCTAATTCTCGATGATTTCAGTTTTGTTGAAGAGT
TTGAAAGTTAG

Upstream 100 bases:

>100_bases
ATATTTCCCCGACTTCCAACGTGGTTAAGCATATTAGCGCAATATTAGAGGAATGGTTACAGAATTATTTCCGTAATCTC
TCTGCAAAGGAGTAGTAATT

Downstream 100 bases:

>100_bases
TTATGGCGTTTCTTAATCTACTGGCATACTGAGTACATGAGTAAACTGATCGTCCTAAATTTAGGAAAAGGAAACTTACA
CCAAGGATTTCCGGCGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSSFCVPPTQLWLEVSAGIQDQSWQQSQTCLNPSGRWHIFLNQVCLSTFLPWLQAEYSPEATLATVPNSWEFVNGTAINL
DTKRLILIPDKSLDTREFHVPQEWIDIPQWAGDYYLAVQVSPDGEWLRIWGYTTHEQLKNQGSYDPQERTYSLKAYQMIE
DLNVLWVVRQLYPEEQTQVAIAPLAELSPTQVDNLWQRLSNPAITNPRLELPFEIWGALLAKSQQPQPKSALVNLRQWLQ
NTLTNSWQTVETLLGTQPDFAFSFRQADDTAERSIQRVKVIDLPSGQTIVLMLTLTLETDGRVGIRVQLSPRERGIYLPE
NMRLELISASGQVVQSVEARETDNSIQLKRFRCPQNTRFSLQLILDDFSFVEEFES

Sequences:

>Translated_376_residues
MSSFCVPPTQLWLEVSAGIQDQSWQQSQTCLNPSGRWHIFLNQVCLSTFLPWLQAEYSPEATLATVPNSWEFVNGTAINL
DTKRLILIPDKSLDTREFHVPQEWIDIPQWAGDYYLAVQVSPDGEWLRIWGYTTHEQLKNQGSYDPQERTYSLKAYQMIE
DLNVLWVVRQLYPEEQTQVAIAPLAELSPTQVDNLWQRLSNPAITNPRLELPFEIWGALLAKSQQPQPKSALVNLRQWLQ
NTLTNSWQTVETLLGTQPDFAFSFRQADDTAERSIQRVKVIDLPSGQTIVLMLTLTLETDGRVGIRVQLSPRERGIYLPE
NMRLELISASGQVVQSVEARETDNSIQLKRFRCPQNTRFSLQLILDDFSFVEEFES
>Mature_375_residues
SSFCVPPTQLWLEVSAGIQDQSWQQSQTCLNPSGRWHIFLNQVCLSTFLPWLQAEYSPEATLATVPNSWEFVNGTAINLD
TKRLILIPDKSLDTREFHVPQEWIDIPQWAGDYYLAVQVSPDGEWLRIWGYTTHEQLKNQGSYDPQERTYSLKAYQMIED
LNVLWVVRQLYPEEQTQVAIAPLAELSPTQVDNLWQRLSNPAITNPRLELPFEIWGALLAKSQQPQPKSALVNLRQWLQN
TLTNSWQTVETLLGTQPDFAFSFRQADDTAERSIQRVKVIDLPSGQTIVLMLTLTLETDGRVGIRVQLSPRERGIYLPEN
MRLELISASGQVVQSVEARETDNSIQLKRFRCPQNTRFSLQLILDDFSFVEEFES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43228; Mature: 43097

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFCVPPTQLWLEVSAGIQDQSWQQSQTCLNPSGRWHIFLNQVCLSTFLPWLQAEYSPE
CCCCCCCHHHEEEEEECCCCCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCC
ATLATVPNSWEFVNGTAINLDTKRLILIPDKSLDTREFHVPQEWIDIPQWAGDYYLAVQV
CEEEECCCCCEEECCEEEEECCCEEEEECCCCCCCCEEECCHHHHCCCCCCCCEEEEEEE
SPDGEWLRIWGYTTHEQLKNQGSYDPQERTYSLKAYQMIEDLNVLWVVRQLYPEEQTQVA
CCCCCEEEEEECCHHHHHHCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEE
IAPLAELSPTQVDNLWQRLSNPAITNPRLELPFEIWGALLAKSQQPQPKSALVNLRQWLQ
EEEHHHCCCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
NTLTNSWQTVETLLGTQPDFAFSFRQADDTAERSIQRVKVIDLPSGQTIVLMLTLTLETD
HHHCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHEEEEEEECCCCCEEEEEEEEEEECC
GRVGIRVQLSPRERGIYLPENMRLELISASGQVVQSVEARETDNSIQLKRFRCPQNTRFS
CCEEEEEEECCCCCCEECCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCEE
LQLILDDFSFVEEFES
EEEEEHHHHHHHHHCC
>Mature Secondary Structure 
SSFCVPPTQLWLEVSAGIQDQSWQQSQTCLNPSGRWHIFLNQVCLSTFLPWLQAEYSPE
CCCCCCHHHEEEEEECCCCCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCC
ATLATVPNSWEFVNGTAINLDTKRLILIPDKSLDTREFHVPQEWIDIPQWAGDYYLAVQV
CEEEECCCCCEEECCEEEEECCCEEEEECCCCCCCCEEECCHHHHCCCCCCCCEEEEEEE
SPDGEWLRIWGYTTHEQLKNQGSYDPQERTYSLKAYQMIEDLNVLWVVRQLYPEEQTQVA
CCCCCEEEEEECCHHHHHHCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEE
IAPLAELSPTQVDNLWQRLSNPAITNPRLELPFEIWGALLAKSQQPQPKSALVNLRQWLQ
EEEHHHCCCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
NTLTNSWQTVETLLGTQPDFAFSFRQADDTAERSIQRVKVIDLPSGQTIVLMLTLTLETD
HHHCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHEEEEEEECCCCCEEEEEEEEEEECC
GRVGIRVQLSPRERGIYLPENMRLELISASGQVVQSVEARETDNSIQLKRFRCPQNTRFS
CCEEEEEEECCCCCCEECCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCEE
LQLILDDFSFVEEFES
EEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA