Click here to switch to the map view.

The map label for this gene is 17228801

Identifier: 17228801

GI number: 17228801

Start: 1547962

End: 1548774

Strand: Direct

Name: 17228801

Synonym: alr1306

Alternate gene names: NA

Gene position: 1547962-1548774 (Clockwise)

Preceding gene: 17228797

Following gene: 17228802

Centisome position: 24.13

GC content: 34.81

Gene sequence:

>813_bases
ATGACGGACGTAAAAGAAGTATTAAGCTTTATTGAAAAAATTGAAGGTGAAAATTTGGGCAAATCGGCTTATGAAATCGC
TAATCTTTTACGTGGTTATACAAAGTCAGAATACACAAGTAAGTTATGGACTGTAGCTACAGGGTATAAGCAAAAATACA
TTGCAGGAGAATTTCAAGGGAGACTCAACAAACATTTATTATTAAGTGGCGAAATGACTGACTTTGCTCATTTCATCGCC
TCACTTTCAGACCAAATCAACCAACCAGGAATTAAAAAGTCTGACTTAACCAGTTGGACTTCCGACCATACCTCATGGGC
TGGGGATATTGGCTCTGCTATTATATTTTATCGCTCTCAAGCTGATAAAGGAAATGCCATGACCCTTGAGAAAGTACTGA
TAGGGCTGGCTAGTGACTCGGATTTTACCGCTAATATTGCTGCTTACTTAGTTGGATTTATGATTAATGTAAACCAGCAA
ACTACCATTTCAAAAGCTATTTATGATTACGATAAAATTCAGTATGCAACGCATCTACAAACATTTATCAAGAAACGTTT
TGGTGGCATTATTGAAGGTAATAAATTACAAAATACAGATTTAATTGAATCTGCAATCCAGCAATCTGTATCTACTTTTA
TAGGATTATATTCGCCTGCATCTAATTTATATAAATCTTTGAAATACTTGCTAAAATTTCCACCTCAAATAAGATGGCAG
AACAAGATAGTAATTAACAGTAGTGATTTACAGATCGGTTCTCAACATTTCTTATCTCACTTGATGAAATATGCAGCCTT
AGATAGGCAATAG

Upstream 100 bases:

>100_bases
GGGAGACTTGCTCAACTCAATACAAATGCGGAAATTAACAATAAGACTGAGTAGATTATTTTATAAAAATTACAATCTCT
GAAATCAACAGCGTACATTT

Downstream 100 bases:

>100_bases
TGATTTTCCAGACTCCTTGGCTTTCCTCATCCCTTTACTCTAATAGCTGCGTGTTTTGAGGCTCTGTCATGAAGCGGACA
GAGGAGCGCGAGATTTCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTDVKEVLSFIEKIEGENLGKSAYEIANLLRGYTKSEYTSKLWTVATGYKQKYIAGEFQGRLNKHLLLSGEMTDFAHFIA
SLSDQINQPGIKKSDLTSWTSDHTSWAGDIGSAIIFYRSQADKGNAMTLEKVLIGLASDSDFTANIAAYLVGFMINVNQQ
TTISKAIYDYDKIQYATHLQTFIKKRFGGIIEGNKLQNTDLIESAIQQSVSTFIGLYSPASNLYKSLKYLLKFPPQIRWQ
NKIVINSSDLQIGSQHFLSHLMKYAALDRQ

Sequences:

>Translated_270_residues
MTDVKEVLSFIEKIEGENLGKSAYEIANLLRGYTKSEYTSKLWTVATGYKQKYIAGEFQGRLNKHLLLSGEMTDFAHFIA
SLSDQINQPGIKKSDLTSWTSDHTSWAGDIGSAIIFYRSQADKGNAMTLEKVLIGLASDSDFTANIAAYLVGFMINVNQQ
TTISKAIYDYDKIQYATHLQTFIKKRFGGIIEGNKLQNTDLIESAIQQSVSTFIGLYSPASNLYKSLKYLLKFPPQIRWQ
NKIVINSSDLQIGSQHFLSHLMKYAALDRQ
>Mature_269_residues
TDVKEVLSFIEKIEGENLGKSAYEIANLLRGYTKSEYTSKLWTVATGYKQKYIAGEFQGRLNKHLLLSGEMTDFAHFIAS
LSDQINQPGIKKSDLTSWTSDHTSWAGDIGSAIIFYRSQADKGNAMTLEKVLIGLASDSDFTANIAAYLVGFMINVNQQT
TISKAIYDYDKIQYATHLQTFIKKRFGGIIEGNKLQNTDLIESAIQQSVSTFIGLYSPASNLYKSLKYLLKFPPQIRWQN
KIVINSSDLQIGSQHFLSHLMKYAALDRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30353; Mature: 30222

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVKEVLSFIEKIEGENLGKSAYEIANLLRGYTKSEYTSKLWTVATGYKQKYIAGEFQG
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
RLNKHLLLSGEMTDFAHFIASLSDQINQPGIKKSDLTSWTSDHTSWAGDIGSAIIFYRSQ
CCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHCCEEEEEECC
ADKGNAMTLEKVLIGLASDSDFTANIAAYLVGFMINVNQQTTISKAIYDYDKIQYATHLQ
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TFIKKRFGGIIEGNKLQNTDLIESAIQQSVSTFIGLYSPASNLYKSLKYLLKFPPQIRWQ
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
NKIVINSSDLQIGSQHFLSHLMKYAALDRQ
CEEEEECCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDVKEVLSFIEKIEGENLGKSAYEIANLLRGYTKSEYTSKLWTVATGYKQKYIAGEFQG
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
RLNKHLLLSGEMTDFAHFIASLSDQINQPGIKKSDLTSWTSDHTSWAGDIGSAIIFYRSQ
CCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHCCEEEEEECC
ADKGNAMTLEKVLIGLASDSDFTANIAAYLVGFMINVNQQTTISKAIYDYDKIQYATHLQ
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TFIKKRFGGIIEGNKLQNTDLIESAIQQSVSTFIGLYSPASNLYKSLKYLLKFPPQIRWQ
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
NKIVINSSDLQIGSQHFLSHLMKYAALDRQ
CEEEEECCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA