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The map label for this gene is 17228790

Identifier: 17228790

GI number: 17228790

Start: 1535955

End: 1536767

Strand: Direct

Name: 17228790

Synonym: alr1295

Alternate gene names: NA

Gene position: 1535955-1536767 (Clockwise)

Preceding gene: 17228784

Following gene: 17228791

Centisome position: 23.95

GC content: 41.21

Gene sequence:

>813_bases
GTGTTCGGAATTTTGGTGGCAATAATTGTGATTATTGGGTTAAATTCCTTTATTATTATCAATCCAGGGCAAGCAGGAGT
GTTGAGTATCTTAGGGAAAGCTAGGGATGGCGCGTTACTAGAGGGGATTCACTTGAAACCGCCTTTGATTTCGGCGATAG
ATGTTTATGATCTCACCGTCCAAAAATTTGAAGTACCAGCAGAAAGTTCTACCAAAGATTTACAAAATTTGTCTGCTCGG
TTTGCCATTAACTTTCGCTTAGATCCCATCCAGGTGGTAGATGTGAGAAGAAAGCAAGGAACTCTAGAAAATATTGTCTC
AAAAATTATCGCTCCTCAAACACAAGAAGCATTCAAAATTGCAGCCGCTAGAAGAACGGTGGAAGAAGCAATTACCAAAC
GGAGTGAATTAAAAGAAGACTTCGATAATGCTTTAGGCGATCGCTTAGATAAATATGGAATAATAGTATTAGATACTAGC
GTAGTTGACTTGACATTCTCGCCAGAATTTGCCAGAGCCGTAGAAGAAAAACAAATTGCTGAACAACGCGCCCAAAGAGC
CGTTTACGTAGCGAGAGAAGCCGAACAAGAAGCGCAAGCAGAAATTAATCGAGCCAAAGGGAAAGCAGAAGCCCAAAGAC
TTTTAGCAGAAACTCTCAAAGCTCAAGGTGGGCAATTAGTACTGCAAAAAGAAGCCATAGAAGCCTGGAAAACTGGTGGC
GCGCAAATGCCCAAGGTTCTAGTCATGGGTAAAGAATCACCAGGCAGTGTACCCTTTATCTTTAATCTAGGAAACACCCA
AAATTTAAACTAA

Upstream 100 bases:

>100_bases
GGAATTGGGGACAGAGATAACTGTCAACTGTCAACTGTCAACTATTAACTACGGAGAAACAAGCTTGAAAAATCAGCAAT
TGGGAAATTGGCAAACTACT

Downstream 100 bases:

>100_bases
TTGTCTGCTCACACACAAACACAACTTAGGAACATAATAAAGTAGTTTATGTCAATGCCCAATCATCCCAATCTTACCAC
CGCCGACGCGAAAAAAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Prohibitin; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Band 7 Protein Like; Prohibitin Family Protein; SPFH Domain Band 7 Family Protein; Band 7 Protein Cation Conductance; Band 7 Family Protein; HflC Protein; Prohibitin Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MFGILVAIIVIIGLNSFIIINPGQAGVLSILGKARDGALLEGIHLKPPLISAIDVYDLTVQKFEVPAESSTKDLQNLSAR
FAINFRLDPIQVVDVRRKQGTLENIVSKIIAPQTQEAFKIAAARRTVEEAITKRSELKEDFDNALGDRLDKYGIIVLDTS
VVDLTFSPEFARAVEEKQIAEQRAQRAVYVAREAEQEAQAEINRAKGKAEAQRLLAETLKAQGGQLVLQKEAIEAWKTGG
AQMPKVLVMGKESPGSVPFIFNLGNTQNLN

Sequences:

>Translated_270_residues
MFGILVAIIVIIGLNSFIIINPGQAGVLSILGKARDGALLEGIHLKPPLISAIDVYDLTVQKFEVPAESSTKDLQNLSAR
FAINFRLDPIQVVDVRRKQGTLENIVSKIIAPQTQEAFKIAAARRTVEEAITKRSELKEDFDNALGDRLDKYGIIVLDTS
VVDLTFSPEFARAVEEKQIAEQRAQRAVYVAREAEQEAQAEINRAKGKAEAQRLLAETLKAQGGQLVLQKEAIEAWKTGG
AQMPKVLVMGKESPGSVPFIFNLGNTQNLN
>Mature_270_residues
MFGILVAIIVIIGLNSFIIINPGQAGVLSILGKARDGALLEGIHLKPPLISAIDVYDLTVQKFEVPAESSTKDLQNLSAR
FAINFRLDPIQVVDVRRKQGTLENIVSKIIAPQTQEAFKIAAARRTVEEAITKRSELKEDFDNALGDRLDKYGIIVLDTS
VVDLTFSPEFARAVEEKQIAEQRAQRAVYVAREAEQEAQAEINRAKGKAEAQRLLAETLKAQGGQLVLQKEAIEAWKTGG
AQMPKVLVMGKESPGSVPFIFNLGNTQNLN

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4505773, Length=187, Percent_Identity=33.1550802139037, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI6005854, Length=229, Percent_Identity=26.2008733624454, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI221307584, Length=229, Percent_Identity=26.2008733624454, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI193205005, Length=190, Percent_Identity=31.0526315789474, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17509869, Length=167, Percent_Identity=28.7425149700599, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6321571, Length=188, Percent_Identity=31.3829787234043, Blast_Score=99, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6321670, Length=180, Percent_Identity=32.7777777777778, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24585145, Length=187, Percent_Identity=33.1550802139037, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24585147, Length=187, Percent_Identity=33.1550802139037, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI161077242, Length=207, Percent_Identity=28.5024154589372, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI161077244, Length=207, Percent_Identity=28.5024154589372, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI161077238, Length=207, Percent_Identity=28.5024154589372, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI161077236, Length=207, Percent_Identity=28.5024154589372, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI161077234, Length=207, Percent_Identity=28.5024154589372, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI161077240, Length=207, Percent_Identity=28.5024154589372, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281365192, Length=188, Percent_Identity=32.4468085106383, Blast_Score=78, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29559; Mature: 29559

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGILVAIIVIIGLNSFIIINPGQAGVLSILGKARDGALLEGIHLKPPLISAIDVYDLTV
CHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHH
QKFEVPAESSTKDLQNLSARFAINFRLDPIQVVDVRRKQGTLENIVSKIIAPQTQEAFKI
HHEECCCCCCHHHHHHCCEEEEEEEECCCEEEEECHHHCCCHHHHHHHHHCCCCHHHHHH
AAARRTVEEAITKRSELKEDFDNALGDRLDKYGIIVLDTSVVDLTFSPEFARAVEEKQIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECEEEEEEECHHHHHHHHHHHHH
EQRAQRAVYVAREAEQEAQAEINRAKGKAEAQRLLAETLKAQGGQLVLQKEAIEAWKTGG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCC
AQMPKVLVMGKESPGSVPFIFNLGNTQNLN
CCCCEEEEEECCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MFGILVAIIVIIGLNSFIIINPGQAGVLSILGKARDGALLEGIHLKPPLISAIDVYDLTV
CHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHH
QKFEVPAESSTKDLQNLSARFAINFRLDPIQVVDVRRKQGTLENIVSKIIAPQTQEAFKI
HHEECCCCCCHHHHHHCCEEEEEEEECCCEEEEECHHHCCCHHHHHHHHHCCCCHHHHHH
AAARRTVEEAITKRSELKEDFDNALGDRLDKYGIIVLDTSVVDLTFSPEFARAVEEKQIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECEEEEEEECHHHHHHHHHHHHH
EQRAQRAVYVAREAEQEAQAEINRAKGKAEAQRLLAETLKAQGGQLVLQKEAIEAWKTGG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCC
AQMPKVLVMGKESPGSVPFIFNLGNTQNLN
CCCCEEEEEECCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA