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The map label for this gene is perM [C]

Identifier: 17228745

GI number: 17228745

Start: 1483130

End: 1484218

Strand: Direct

Name: perM [C]

Synonym: alr1250

Alternate gene names: 17228745

Gene position: 1483130-1484218 (Clockwise)

Preceding gene: 17228742

Following gene: 17228749

Centisome position: 23.12

GC content: 40.31

Gene sequence:

>1089_bases
ATGCGCCGTTCTTCATCCCTTCAAAGTTTACTCATTTATGGTCTGAGCGGCCCGGTGATCGCTCTGAATGTCTGGCTATT
GTCCGTACTTTTTCGCTATTTTCAAAATCCTTTGACAATCCTGAGTCTGGCGGCGATTTTAGCTTTCTTACTAAATTATT
TAGTAAAATTTTTTGAACGCGCTAGAATTACCCGCACTCAAGCTGTTGTTATAGTTCTGCTGGTTACCTTAACTTTATTC
GGCATTTTGACAGTTACTTTAGTGCCGATGCTGATTGACCAAACAGTCCAACTATTAAATAAGATCCCTGATTGGTTAAC
AGCTAGTCAAGCAAACTTAGAGCATTTTGAGAGATTTGCCAAGCAGCGACGTTTACCCCTTGATTTGCGGGTTTTGAGTA
ATCAAATAAACGCTAGTATTCAAAGTGTAGTGCAGCAACTTGCTTCTGGTGCGGTGGGATTAGCTGGAACGTTGCTCTCA
GGATTACTCAACTTTATATTAGTGGTAGTGCTGGCATTTTATATGCTGATATATGGCGATCGCGTCTGGTATGGTTTGAT
TAATTTACTACCATCGAAAATCAGATTCCCCCTAACCAAATCTTTGCAGCTAAACTTTCAAAATTTCTTCCTCAGCCAGT
TGTTGCTGGGGTTATTCATGATTGTCGCCCTTACCCCCATTTTCCTGATTCTCAAAGTACCCTTTGCTTTATTATTTGCC
ATACTCATTGGAATTTCTCAACTGATTCCTTTTATTGGCGCAACTTTAGGTATTGGGTTAGTAACAATTTTGGTACTTTT
GCAAAACTGGTGGTTAGCAGTGCAAGTGGCGATCGCCGCAATTATCATGCAGCAGATCAAAGACAATCTCTTAAGCCCCA
GGTTACTGGGTAATTTTATTGGACTTAACCCAATCTGGATTTTTGTAGCAATTTTGATGGGATATGAAATAGCAGGTTTA
TTAGGAACACTAGTTGCTGTTCCTATTGCCGGCACAATTAAAGGAACTTTCGATGCTCTTAAGGGTGGCAAGTCAGATGA
CTTTATGTCAACAGTCACTATCGACCATGACTCACCTAATGATGAATAG

Upstream 100 bases:

>100_bases
ATAGGTAATTGCCACAGCATATAAGTATTTCCAGTATTTAAACGAGCATCATACATACTACATAAATTCTTCCCCAGAGT
AGCGGAAATCGATTGCATCA

Downstream 100 bases:

>100_bases
TTAATCGTCAATATTAGTATTCAGTACCCCTTGATCTGCTCCCTATCGGATTATTTCGCTGCATCACAAAACCTAAGGAT
ACTCGTTTCATGATTAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MRRSSSLQSLLIYGLSGPVIALNVWLLSVLFRYFQNPLTILSLAAILAFLLNYLVKFFERARITRTQAVVIVLLVTLTLF
GILTVTLVPMLIDQTVQLLNKIPDWLTASQANLEHFERFAKQRRLPLDLRVLSNQINASIQSVVQQLASGAVGLAGTLLS
GLLNFILVVVLAFYMLIYGDRVWYGLINLLPSKIRFPLTKSLQLNFQNFFLSQLLLGLFMIVALTPIFLILKVPFALLFA
ILIGISQLIPFIGATLGIGLVTILVLLQNWWLAVQVAIAAIIMQQIKDNLLSPRLLGNFIGLNPIWIFVAILMGYEIAGL
LGTLVAVPIAGTIKGTFDALKGGKSDDFMSTVTIDHDSPNDE

Sequences:

>Translated_362_residues
MRRSSSLQSLLIYGLSGPVIALNVWLLSVLFRYFQNPLTILSLAAILAFLLNYLVKFFERARITRTQAVVIVLLVTLTLF
GILTVTLVPMLIDQTVQLLNKIPDWLTASQANLEHFERFAKQRRLPLDLRVLSNQINASIQSVVQQLASGAVGLAGTLLS
GLLNFILVVVLAFYMLIYGDRVWYGLINLLPSKIRFPLTKSLQLNFQNFFLSQLLLGLFMIVALTPIFLILKVPFALLFA
ILIGISQLIPFIGATLGIGLVTILVLLQNWWLAVQVAIAAIIMQQIKDNLLSPRLLGNFIGLNPIWIFVAILMGYEIAGL
LGTLVAVPIAGTIKGTFDALKGGKSDDFMSTVTIDHDSPNDE
>Mature_362_residues
MRRSSSLQSLLIYGLSGPVIALNVWLLSVLFRYFQNPLTILSLAAILAFLLNYLVKFFERARITRTQAVVIVLLVTLTLF
GILTVTLVPMLIDQTVQLLNKIPDWLTASQANLEHFERFAKQRRLPLDLRVLSNQINASIQSVVQQLASGAVGLAGTLLS
GLLNFILVVVLAFYMLIYGDRVWYGLINLLPSKIRFPLTKSLQLNFQNFFLSQLLLGLFMIVALTPIFLILKVPFALLFA
ILIGISQLIPFIGATLGIGLVTILVLLQNWWLAVQVAIAAIIMQQIKDNLLSPRLLGNFIGLNPIWIFVAILMGYEIAGL
LGTLVAVPIAGTIKGTFDALKGGKSDDFMSTVTIDHDSPNDE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=327, Percent_Identity=24.1590214067278, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544
- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40003; Mature: 40003

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSSSLQSLLIYGLSGPVIALNVWLLSVLFRYFQNPLTILSLAAILAFLLNYLVKFFER
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
ARITRTQAVVIVLLVTLTLFGILTVTLVPMLIDQTVQLLNKIPDWLTASQANLEHFERFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHH
KQRRLPLDLRVLSNQINASIQSVVQQLASGAVGLAGTLLSGLLNFILVVVLAFYMLIYGD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVWYGLINLLPSKIRFPLTKSLQLNFQNFFLSQLLLGLFMIVALTPIFLILKVPFALLFA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIGISQLIPFIGATLGIGLVTILVLLQNWWLAVQVAIAAIIMQQIKDNLLSPRLLGNFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GLNPIWIFVAILMGYEIAGLLGTLVAVPIAGTIKGTFDALKGGKSDDFMSTVTIDHDSPN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
DE
CC
>Mature Secondary Structure
MRRSSSLQSLLIYGLSGPVIALNVWLLSVLFRYFQNPLTILSLAAILAFLLNYLVKFFER
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
ARITRTQAVVIVLLVTLTLFGILTVTLVPMLIDQTVQLLNKIPDWLTASQANLEHFERFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHH
KQRRLPLDLRVLSNQINASIQSVVQQLASGAVGLAGTLLSGLLNFILVVVLAFYMLIYGD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVWYGLINLLPSKIRFPLTKSLQLNFQNFFLSQLLLGLFMIVALTPIFLILKVPFALLFA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIGISQLIPFIGATLGIGLVTILVLLQNWWLAVQVAIAAIIMQQIKDNLLSPRLLGNFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GLNPIWIFVAILMGYEIAGLLGTLVAVPIAGTIKGTFDALKGGKSDDFMSTVTIDHDSPN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
DE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]