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The map label for this gene is yidS [C]

Identifier: 17228704

GI number: 17228704

Start: 1423662

End: 1424783

Strand: Direct

Name: yidS [C]

Synonym: alr1209

Alternate gene names: 17228704

Gene position: 1423662-1424783 (Clockwise)

Preceding gene: 17228703

Following gene: 17228707

Centisome position: 22.2

GC content: 44.65

Gene sequence:

>1122_bases
ATGTACGACACCATCATTGTTGGTGCTGGGCCTGCGGGTGGCGCAGCAGCCTATCATTTAGCCAAGAAAGGGCGCTCAGT
ATTAGTTTTAGAAAAAGAATCCTTACCTAGATATAAACCATGTGGCGGGGGAGTGTCACCAATAGTTGCCGAATGGTTTG
ACTTTGACTTTAGCCCAGCAATTTCTCTGAAAGTAGACTCGTTTCGCTTTACTTGGAACTTAGGCGATCCTGTAGAAGCG
AAGATTGAGACTAAAGAGCCAGTGTGGATGGTACGTCGAGATGTTTTTGACCATTTCTTAGTCCAGCAAGCCCAGAAACA
AGGGGCTGAACTGCGTGATAATACAGAAGTTACAGGAATTGAGTTTAAAAGCGATCGCTGGCAAGTTGACACTGTCAACG
GCCCTGTTACAAGTCGCTACTTAATTGCGGCTGACGGTGCTAAAGGGCCAATGGCAAAATGGTTAGGCTTTAAAGAGCGT
AAACGCCGTTTAGCCGGTGCATTAGAAGCAGAAGTTCCCGCCAATGTCGAAGATAAATCTACAATTCACTTCGAGTTTGG
TTTAGTGAAAAATGGTTATATTTGGAACTTCCCCAAAGAAGATGGTTATTCTATTGGAGTGGGAACCTTCATTGGTGGTC
AACCCCAAGATTTTAAGAAAATTTTGGTTGAATACTCTCAATTATTTAATATAGATGTCAAAACCAGTAAGCAGTATGGT
CATCCAATTGCTTTGTGGGATGGTAATCAAAAATTACACACTCAAAATGCTATTTTGGCAGGGGAAGCAGCTTGTGTAGT
TGACCCCATGACCGCCGAAGGGATTCGTCCCTCAATTTATAGTGGTGTTATGGCCGCCGGAGCCGTTGACAAAGCGCTTT
CTGGTGATATCAACGCTTTGGAACAATACACCGAAATCATCCATGAAAGTTGGGGTGCGGAAATGGCTTGGGCGCAAAAA
TTAGCCGGAGCATTCTATCGCTTTCCTAGCGTTGGTTATCAAGTTGGTGTTAAGCGTCCCACTGCACCCAAAATTATGGG
TAAAATCCTCTGTGGTGAAATGTCTTACAGCAGCGTTGCTGGTCGCGCTCTCAAGCGTTTAATCCCTGGCTTTAGAGGTT
AG

Upstream 100 bases:

>100_bases
TTTCAGGCTGAGGAACATGAGATTCTTCAGCCTTTTTTATCTGTAAGTGTTGACTGTTGATCAGTCTCAGAAATTTTGAA
TTTTGAATTTTGAATTATTT

Downstream 100 bases:

>100_bases
GGAACACCGATTAACAATTCAAAATTCAAAATTCAAAATTCAAAATGAAGAGAAGTATCTGTAGGGTGGGCATTGCCCAA
CGCCACTTGCTCCAAGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MYDTIIVGAGPAGGAAAYHLAKKGRSVLVLEKESLPRYKPCGGGVSPIVAEWFDFDFSPAISLKVDSFRFTWNLGDPVEA
KIETKEPVWMVRRDVFDHFLVQQAQKQGAELRDNTEVTGIEFKSDRWQVDTVNGPVTSRYLIAADGAKGPMAKWLGFKER
KRRLAGALEAEVPANVEDKSTIHFEFGLVKNGYIWNFPKEDGYSIGVGTFIGGQPQDFKKILVEYSQLFNIDVKTSKQYG
HPIALWDGNQKLHTQNAILAGEAACVVDPMTAEGIRPSIYSGVMAAGAVDKALSGDINALEQYTEIIHESWGAEMAWAQK
LAGAFYRFPSVGYQVGVKRPTAPKIMGKILCGEMSYSSVAGRALKRLIPGFRG

Sequences:

>Translated_373_residues
MYDTIIVGAGPAGGAAAYHLAKKGRSVLVLEKESLPRYKPCGGGVSPIVAEWFDFDFSPAISLKVDSFRFTWNLGDPVEA
KIETKEPVWMVRRDVFDHFLVQQAQKQGAELRDNTEVTGIEFKSDRWQVDTVNGPVTSRYLIAADGAKGPMAKWLGFKER
KRRLAGALEAEVPANVEDKSTIHFEFGLVKNGYIWNFPKEDGYSIGVGTFIGGQPQDFKKILVEYSQLFNIDVKTSKQYG
HPIALWDGNQKLHTQNAILAGEAACVVDPMTAEGIRPSIYSGVMAAGAVDKALSGDINALEQYTEIIHESWGAEMAWAQK
LAGAFYRFPSVGYQVGVKRPTAPKIMGKILCGEMSYSSVAGRALKRLIPGFRG
>Mature_373_residues
MYDTIIVGAGPAGGAAAYHLAKKGRSVLVLEKESLPRYKPCGGGVSPIVAEWFDFDFSPAISLKVDSFRFTWNLGDPVEA
KIETKEPVWMVRRDVFDHFLVQQAQKQGAELRDNTEVTGIEFKSDRWQVDTVNGPVTSRYLIAADGAKGPMAKWLGFKER
KRRLAGALEAEVPANVEDKSTIHFEFGLVKNGYIWNFPKEDGYSIGVGTFIGGQPQDFKKILVEYSQLFNIDVKTSKQYG
HPIALWDGNQKLHTQNAILAGEAACVVDPMTAEGIRPSIYSGVMAAGAVDKALSGDINALEQYTEIIHESWGAEMAWAQK
LAGAFYRFPSVGYQVGVKRPTAPKIMGKILCGEMSYSSVAGRALKRLIPGFRG

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 40975; Mature: 40975

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDTIIVGAGPAGGAAAYHLAKKGRSVLVLEKESLPRYKPCGGGVSPIVAEWFDFDFSPA
CCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCE
ISLKVDSFRFTWNLGDPVEAKIETKEPVWMVRRDVFDHFLVQQAQKQGAELRDNTEVTGI
EEEEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
EFKSDRWQVDTVNGPVTSRYLIAADGAKGPMAKWLGFKERKRRLAGALEAEVPANVEDKS
EECCCCEEEEECCCCCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
TIHFEFGLVKNGYIWNFPKEDGYSIGVGTFIGGQPQDFKKILVEYSQLFNIDVKTSKQYG
EEEEEEEEEECCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCCCC
HPIALWDGNQKLHTQNAILAGEAACVVDPMTAEGIRPSIYSGVMAAGAVDKALSGDINAL
CEEEEECCCCEEECCCEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
EQYTEIIHESWGAEMAWAQKLAGAFYRFPSVGYQVGVKRPTAPKIMGKILCGEMSYSSVA
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHH
GRALKRLIPGFRG
HHHHHHHCCCCCC
>Mature Secondary Structure
MYDTIIVGAGPAGGAAAYHLAKKGRSVLVLEKESLPRYKPCGGGVSPIVAEWFDFDFSPA
CCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCE
ISLKVDSFRFTWNLGDPVEAKIETKEPVWMVRRDVFDHFLVQQAQKQGAELRDNTEVTGI
EEEEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
EFKSDRWQVDTVNGPVTSRYLIAADGAKGPMAKWLGFKERKRRLAGALEAEVPANVEDKS
EECCCCEEEEECCCCCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
TIHFEFGLVKNGYIWNFPKEDGYSIGVGTFIGGQPQDFKKILVEYSQLFNIDVKTSKQYG
EEEEEEEEEECCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCCCC
HPIALWDGNQKLHTQNAILAGEAACVVDPMTAEGIRPSIYSGVMAAGAVDKALSGDINAL
CEEEEECCCCEEECCCEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
EQYTEIIHESWGAEMAWAQKLAGAFYRFPSVGYQVGVKRPTAPKIMGKILCGEMSYSSVA
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHH
GRALKRLIPGFRG
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9063468 [H]