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The map label for this gene is ykoG [H]

Identifier: 17228689

GI number: 17228689

Start: 1406796

End: 1407482

Strand: Direct

Name: ykoG [H]

Synonym: alr1194

Alternate gene names: 17228689

Gene position: 1406796-1407482 (Clockwise)

Preceding gene: 17228687

Following gene: 17228690

Centisome position: 21.93

GC content: 41.92

Gene sequence:

>687_bases
ATGACAACACACATTCTTTTGGTTGAAGATGAAGTTAAATTAGCGCGATTTGTCGAATTGGAACTAAGTAGTGAAGGTTA
CAAAGTTAGTGTCGCTCATGATGGAATTACTGGACTAACCTTGGCGCGAGAGTCAACACCCGATTTAGCGGTTCTTGATT
GGATGTTACCAGGACTATCAGGTTTAGAAATTTGTCGCCGTCTGCGAGCAACGGGTAATTCAATACCTGTAATTTTGTTA
ACTGCCAGAGACGAAGTGAGCGATCGCGTGGCAGGATTAGATGCAGGAGCTGATGATTATGTAGTCAAACCCTTCAGTAT
TGAGGAATTATTAGCAAGAATTCGCGCCCATCTGCGCCGCACTCAAGAAACAGATGAAGACTTGTTGCAGTTTGAAGACC
TAAGTTTAAATCGCCGCACTCGTGAAGTGTTTCGAGGTAACCGAGCGGTTGAATTAACAGCAAAAGAGTTTGATTTATTA
GAGTATCTTCTTTCCTATCCCCGTCAGGTTTTTACCAGAGATCAAATTCTCGAAAAAGTTTGGGGTTATGATTTTATGGG
AGATTCCAACATCATCGAGGTTTATATCCGTTATTTGCGGCTTAAATTGGAAGAAAATAACGAAAAGCGGCTGGTTCATA
CAGTACGTGGCGTAGGATATGCACTACGGGAGTATCCCAACAAATAA

Upstream 100 bases:

>100_bases
GATAACCGAGAAACTTAAGTGTCGAGTTATTTCTTAATAAACCCAGAGTTAGTTTAAGATCACATTTTTTTAGACAATTA
CCAATGATAGGAACAAAAAT

Downstream 100 bases:

>100_bases
TTCCCCAGTGAAAAACTTACCAATTAAAAATTTATAGTGAAAAAGTGACCAATCACTCAGATTTCCATTGACTACGAACA
CAAAATCATTAGCAGGGGTT

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTTHILLVEDEVKLARFVELELSSEGYKVSVAHDGITGLTLARESTPDLAVLDWMLPGLSGLEICRRLRATGNSIPVILL
TARDEVSDRVAGLDAGADDYVVKPFSIEELLARIRAHLRRTQETDEDLLQFEDLSLNRRTREVFRGNRAVELTAKEFDLL
EYLLSYPRQVFTRDQILEKVWGYDFMGDSNIIEVYIRYLRLKLEENNEKRLVHTVRGVGYALREYPNK

Sequences:

>Translated_228_residues
MTTHILLVEDEVKLARFVELELSSEGYKVSVAHDGITGLTLARESTPDLAVLDWMLPGLSGLEICRRLRATGNSIPVILL
TARDEVSDRVAGLDAGADDYVVKPFSIEELLARIRAHLRRTQETDEDLLQFEDLSLNRRTREVFRGNRAVELTAKEFDLL
EYLLSYPRQVFTRDQILEKVWGYDFMGDSNIIEVYIRYLRLKLEENNEKRLVHTVRGVGYALREYPNK
>Mature_227_residues
TTHILLVEDEVKLARFVELELSSEGYKVSVAHDGITGLTLARESTPDLAVLDWMLPGLSGLEICRRLRATGNSIPVILLT
ARDEVSDRVAGLDAGADDYVVKPFSIEELLARIRAHLRRTQETDEDLLQFEDLSLNRRTREVFRGNRAVELTAKEFDLLE
YLLSYPRQVFTRDQILEKVWGYDFMGDSNIIEVYIRYLRLKLEENNEKRLVHTVRGVGYALREYPNK

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=40.3587443946188, Blast_Score=174, Evalue=6e-45,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=41.9642857142857, Blast_Score=171, Evalue=5e-44,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=43.1192660550459, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=41.8502202643172, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=41.6289592760181, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=38.7387387387387, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=40.0900900900901, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=37.7777777777778, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=36.3636363636364, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1787375, Length=216, Percent_Identity=32.4074074074074, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=39.2070484581498, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1790863, Length=236, Percent_Identity=30.0847457627119, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=31.7391304347826, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=31.7391304347826, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=35.8490566037736, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790437, Length=123, Percent_Identity=30.0813008130081, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788521, Length=218, Percent_Identity=30.7339449541284, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787487, Length=101, Percent_Identity=32.6732673267327, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1790299, Length=140, Percent_Identity=26.4285714285714, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26242; Mature: 26111

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHILLVEDEVKLARFVELELSSEGYKVSVAHDGITGLTLARESTPDLAVLDWMLPGLS
CCEEEEEEECCHHHHHHEEEEECCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCC
GLEICRRLRATGNSIPVILLTARDEVSDRVAGLDAGADDYVVKPFSIEELLARIRAHLRR
HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHH
TQETDEDLLQFEDLSLNRRTREVFRGNRAVELTAKEFDLLEYLLSYPRQVFTRDQILEKV
CCCCHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGYDFMGDSNIIEVYIRYLRLKLEENNEKRLVHTVRGVGYALREYPNK
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTHILLVEDEVKLARFVELELSSEGYKVSVAHDGITGLTLARESTPDLAVLDWMLPGLS
CEEEEEEECCHHHHHHEEEEECCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCC
GLEICRRLRATGNSIPVILLTARDEVSDRVAGLDAGADDYVVKPFSIEELLARIRAHLRR
HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHH
TQETDEDLLQFEDLSLNRRTREVFRGNRAVELTAKEFDLLEYLLSYPRQVFTRDQILEKV
CCCCHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGYDFMGDSNIIEVYIRYLRLKLEENNEKRLVHTVRGVGYALREYPNK
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]