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The map label for this gene is 17228675

Identifier: 17228675

GI number: 17228675

Start: 1390042

End: 1391310

Strand: Direct

Name: 17228675

Synonym: alr1180

Alternate gene names: NA

Gene position: 1390042-1391310 (Clockwise)

Preceding gene: 17228669

Following gene: 17228677

Centisome position: 21.67

GC content: 41.37

Gene sequence:

>1269_bases
ATGAACTGCAAGACGTATAAAAAAATACATATAACTCCATCTCATCAAACCACCCAAATTACTCTGCATACGGCAAAACC
ACTCTTAGCTTTAGCCACATTGATAGGATCTGCTATTCCTGCTCAAGCCATCACATTTAACTTTACCTATCAGCCAGGAA
TCACACAGGAACAGATTGCAGCAGTTGAGTTAGCAGGAAGTATTTGGTCTGCTTACTTACAAGATATAGATGTTGTGGTC
AACGTCCATGTCGAGATGACCGAAGGCGTTTTAGCTGAGGGTAAATTGGGCGGTGCAACCCCAGCGATTAAAAAGATCAA
CTATGACAAGTTCAAAGAAGGTTTGGGTGCAGATGGTACAGCTAATATCCATCAGTTGCCAACTTCTACCCACAGCAGTG
ATAAATATAGAACTAGACTAACAGGCGGCATCATCAATAGTAGTAACTATGAACTTCTGACAACTACAGCCAATAATAAA
GCCCTCGGTAATGACTTGAGTGGCGATGCTTCTGGATTAGATGGCTATATTCAATTAGAAAAATCAGTTAATTGGAGTTA
CAGGCACGCTGGGGGCAAAGTTGGACACAACCAATATGATTTTGTCAGTGTAGCTATCCACGAAATTGGGCATAGCTTGG
GTTTTATTAGTGGTATTGATGCTTTGAGTGGTTTAGCTTTACCTACTGCTCTTGATATGTTTCGCTACTCTACCGAGAGT
GCCAGCCAAAGAGCAATTGACTACACAGTTGGTGGAACTAAATACTTCTCAATCAACGGAGGGCAAAATCCGTTTAACTT
TACTCAAATAGAAAAAAACGCCCCCAATGTATACCAAGCAATCTTTTCTACTGGCGAAAATACCCTCTTGGGAGGTGATG
GGGAGCAGGCTAGTCACTGGAAAAGAAATAGCCAACCCTATTTAGGGATTATGTCCTCAACTATCAGCATGGGAGGAATT
AGAAAAATTTCCAAACTGGATCTCGCTGCCCTCGATTACATTGGTTGGCAGGTTGATTATTCCCCAAAAATTAATTTGCC
TGCCTTATCCACGAATGCCCAAACTAAAGCACAAAAAATTTGGGAGTCACAATTCGATAGTAATACAAATAACGATGCCA
TCCGCGATCGCTCTTCTGATGTACAGCAAATGATGCAGGAAAGTGGGATTTATAACTGGGGCTGGAATGGATATTGGCAA
ACAGCCAATCCTACTCCATCATCACAAGTACCTATTTGTTCTCACACAAAAGAACAGGGCAATAAATAA

Upstream 100 bases:

>100_bases
AAAAAAAATTTTTGTTTTTACAAATGTTTCATATCGGAACATCACAATATTTTCTATATTGATTGGCAGTTGATATATTT
ATTACTGATAAATTACTGTC

Downstream 100 bases:

>100_bases
GCTTGTGCGTTGAACTGACTACCCATTGAGATATATCAGAAAACGGGCTGAAAATACTGTGCTTCCTTAGATATGACAAA
GGCTTTTTCATTCATTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MNCKTYKKIHITPSHQTTQITLHTAKPLLALATLIGSAIPAQAITFNFTYQPGITQEQIAAVELAGSIWSAYLQDIDVVV
NVHVEMTEGVLAEGKLGGATPAIKKINYDKFKEGLGADGTANIHQLPTSTHSSDKYRTRLTGGIINSSNYELLTTTANNK
ALGNDLSGDASGLDGYIQLEKSVNWSYRHAGGKVGHNQYDFVSVAIHEIGHSLGFISGIDALSGLALPTALDMFRYSTES
ASQRAIDYTVGGTKYFSINGGQNPFNFTQIEKNAPNVYQAIFSTGENTLLGGDGEQASHWKRNSQPYLGIMSSTISMGGI
RKISKLDLAALDYIGWQVDYSPKINLPALSTNAQTKAQKIWESQFDSNTNNDAIRDRSSDVQQMMQESGIYNWGWNGYWQ
TANPTPSSQVPICSHTKEQGNK

Sequences:

>Translated_422_residues
MNCKTYKKIHITPSHQTTQITLHTAKPLLALATLIGSAIPAQAITFNFTYQPGITQEQIAAVELAGSIWSAYLQDIDVVV
NVHVEMTEGVLAEGKLGGATPAIKKINYDKFKEGLGADGTANIHQLPTSTHSSDKYRTRLTGGIINSSNYELLTTTANNK
ALGNDLSGDASGLDGYIQLEKSVNWSYRHAGGKVGHNQYDFVSVAIHEIGHSLGFISGIDALSGLALPTALDMFRYSTES
ASQRAIDYTVGGTKYFSINGGQNPFNFTQIEKNAPNVYQAIFSTGENTLLGGDGEQASHWKRNSQPYLGIMSSTISMGGI
RKISKLDLAALDYIGWQVDYSPKINLPALSTNAQTKAQKIWESQFDSNTNNDAIRDRSSDVQQMMQESGIYNWGWNGYWQ
TANPTPSSQVPICSHTKEQGNK
>Mature_422_residues
MNCKTYKKIHITPSHQTTQITLHTAKPLLALATLIGSAIPAQAITFNFTYQPGITQEQIAAVELAGSIWSAYLQDIDVVV
NVHVEMTEGVLAEGKLGGATPAIKKINYDKFKEGLGADGTANIHQLPTSTHSSDKYRTRLTGGIINSSNYELLTTTANNK
ALGNDLSGDASGLDGYIQLEKSVNWSYRHAGGKVGHNQYDFVSVAIHEIGHSLGFISGIDALSGLALPTALDMFRYSTES
ASQRAIDYTVGGTKYFSINGGQNPFNFTQIEKNAPNVYQAIFSTGENTLLGGDGEQASHWKRNSQPYLGIMSSTISMGGI
RKISKLDLAALDYIGWQVDYSPKINLPALSTNAQTKAQKIWESQFDSNTNNDAIRDRSSDVQQMMQESGIYNWGWNGYWQ
TANPTPSSQVPICSHTKEQGNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45940; Mature: 45940

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCKTYKKIHITPSHQTTQITLHTAKPLLALATLIGSAIPAQAITFNFTYQPGITQEQIA
CCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHH
AVELAGSIWSAYLQDIDVVVNVHVEMTEGVLAEGKLGGATPAIKKINYDKFKEGLGADGT
HHHHHHHHHHHHHHCCEEEEEEEEEECCCEEECCCCCCCCHHHHHCCHHHHHHCCCCCCC
ANIHQLPTSTHSSDKYRTRLTGGIINSSNYELLTTTANNKALGNDLSGDASGLDGYIQLE
CCCEECCCCCCCCCCEEEEEECCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
KSVNWSYRHAGGKVGHNQYDFVSVAIHEIGHSLGFISGIDALSGLALPTALDMFRYSTES
CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
ASQRAIDYTVGGTKYFSINGGQNPFNFTQIEKNAPNVYQAIFSTGENTLLGGDGEQASHW
HHCCEEEEEECCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHCCCCEEECCCCCHHHHH
KRNSQPYLGIMSSTISMGGIRKISKLDLAALDYIGWQVDYSPKINLPALSTNAQTKAQKI
HCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHH
WESQFDSNTNNDAIRDRSSDVQQMMQESGIYNWGWNGYWQTANPTPSSQVPICSHTKEQG
HHHHCCCCCCCCHHHCCHHHHHHHHHHCCCEECCCCCEEECCCCCCCCCCCCCCCCHHCC
NK
CC
>Mature Secondary Structure
MNCKTYKKIHITPSHQTTQITLHTAKPLLALATLIGSAIPAQAITFNFTYQPGITQEQIA
CCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHH
AVELAGSIWSAYLQDIDVVVNVHVEMTEGVLAEGKLGGATPAIKKINYDKFKEGLGADGT
HHHHHHHHHHHHHHCCEEEEEEEEEECCCEEECCCCCCCCHHHHHCCHHHHHHCCCCCCC
ANIHQLPTSTHSSDKYRTRLTGGIINSSNYELLTTTANNKALGNDLSGDASGLDGYIQLE
CCCEECCCCCCCCCCEEEEEECCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
KSVNWSYRHAGGKVGHNQYDFVSVAIHEIGHSLGFISGIDALSGLALPTALDMFRYSTES
CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
ASQRAIDYTVGGTKYFSINGGQNPFNFTQIEKNAPNVYQAIFSTGENTLLGGDGEQASHW
HHCCEEEEEECCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHCCCCEEECCCCCHHHHH
KRNSQPYLGIMSSTISMGGIRKISKLDLAALDYIGWQVDYSPKINLPALSTNAQTKAQKI
HCCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHH
WESQFDSNTNNDAIRDRSSDVQQMMQESGIYNWGWNGYWQTANPTPSSQVPICSHTKEQG
HHHHCCCCCCCCHHHCCHHHHHHHHHHCCCEECCCCCEEECCCCCCCCCCCCCCCCHHCC
NK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA