| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228641
Identifier: 17228641
GI number: 17228641
Start: 1347727
End: 1350270
Strand: Direct
Name: 17228641
Synonym: alr1146
Alternate gene names: NA
Gene position: 1347727-1350270 (Clockwise)
Preceding gene: 17228639
Following gene: 17228642
Centisome position: 21.01
GC content: 43.99
Gene sequence:
>2544_bases ATGGAGCCAGAAAAACTGGGACGTTTTAAAGAGTACGGCGAACTTATTCTTCAAAAATTAGATTTTGTTCCTCAATCTCC CTCGCAACAAGAAGACTGGGTTCCTGCTAGTCTGGATGATTGTCTTTTACGTCTACGGGAAGCTGCCCAAAAAACGGTAG AACTGGCTACCTCACCCGTAAAAATTGGCGTGATGGGAGAATTTAGTAGTGGTAAAACTCTTCTGTTGGGTAGTCTCATC GGCTATGCAGATGCTTTACCTATCAGCGAAAATCCCACTACAGGAAACGTTACAGCGATTCATCTTATCCCTCATCCGGG TTTTACCACTACCCAGGTTGGTAACTTCACCGTTGAGTATCTGACTCGTGAGGGGGTAAATGAGTGTTTGCGCTTCATGT TAGGAGAAGCCAATCGTCGGACAATAGCAGCCGGACTTCCAGCAATGCAACCGGCAAAACTCAACTCTGGGAAAGAAATT CTCAGTTGGTGTGAAGCCAGTTGGAAGAGTAGTAATAATTTAGAGTTGCGTTATCTGCTGCGGGAGTTGGTGCTGTTTAT CCGCGCCTATGGTTCCTATGGGGAAGCTCTCTGTGGCGGACGCTATGAAATTGACCCTGACTCCGCCCGTGAAGGTTTGC AATTGGCGGAACAGCCTTTGGCTATCCAAACTCTTGGCTTTGAAGATTTACCACCAGCTCATATTCGTTTACCAAGTCCA CCGCAAAAGTTAGCTACCAAGTTATTACAAAATAGTTTCCCCTTAATTCGCCGTGTGGATATTGATGTGAAAATCTCTAG GGAAATTTGGGATATTACAGATGCTTCCGAATTTACTCTTCTGGATTTTCCGGGGTTGGGTGCGGCTAACTCTGGTGCTA GGGATACGTTTTTATCATTGCGGGAATTGGCAGAAGTACAGACGATTTTGGTACTGCTCAATGGTAAATCGCCGGGGAGC GATCGCGCTAATAAAATTTTTACGATGATGCAGCAGCAGCGCCCAGGACAAGACCTGAAGGATTTAATTTTGGTGGGCGT GGGACGGTTTGACCAGTTACCGTTGGAAAGTGAAGGGGGGGAAAGACTACTTGACCAATTAATTGATGAAAGTCGAACGC CGCATTTAACAGCAGATAAGGTTTTACAACAACTCAGGGTTTTACAAACCACCATCGACGGCGCGAGTGCATTCACCACC AACAAAGACCGCATCGCTTTACTCTCACCTCTGTTGGGACTGGCGGAACTAGCCAAGCGTTCCAGCACTATCAAAGCAGG TTCACCAGAGTTTTTGGCTAACTTAGACTATCCCAATTACTTGGAGCGCTCGAAACAGTTGCAGCAAAAGTGGGGATATT TGAGCGATCGCCTGATAGAATCAGATCCACGCAGCCATTTAAGTCGCAAGTTAGGTTACTTTGCTCAAGACGGGGGTATC GCCAAGCTACGGGAATTGATGCAGAATCACGTTGCGACTCACGGACTTAAGCAACTGTATGAGGATACTAGCCGCGCTGC CGATAATTTACGGCAACAACAAGATAATCTCAAAGGTATCATCGCCGAAATTCATGAGCAAGGCATACCCACAGGCGACA GTCAGGCTTTAATTGATTTGCGGACTGCGTTGGAAAATTTAGATAAAACCTATCGCAACTTCCAAAAAGATTTGGGTAAA GAACCACTCAAAGACCGCCGGGGAACTGTGGTTAGTGATGTGGTGAAAGATGAATTGACCTTTAGAGTTTTGAGTTGGAA TCATTGGACTTTGTTATTTAACAAAGCGAATAATGGCACAATCACCATTACAGAATCGAAGGGTGCAGCCGGGAAGTTAT TTGACAGGGGAAATAGAACTAATACCAGTATTCCTACCAAGAGTGATGATTTTTATCCCGCTTTTGAAAAGACTGTCAAA GAAGTAGAAGAATTTGCGCGCGATCGCATCCGCCAAGCAGTGGTAGACTTACTGAGTAAATTATCTCAACAAATCGCCCC AGAACGAGAACGTTTGCAAGCACTCCTCAACCCAGAAATAGAACAAGAGATTGAAAGCAAATTTGGTGGGGAAGAAGCTG ATTTATTTTACCAATTGTTGTTAGGTAGTGACCCGATCCAATGGCAAGCAGCAATCATATCGGAAATTAATCATCAAGAA AAATTCCTCACACCAGATATTATTTTCCCTCTGGCGCGTCAGGATGAAAAACATGATATTGGTCAAATCTTTGATTGGTC GCCGGAAAAAGCACAAACTCTATCTAAGTCCAGTAATCATCAAATGTTCGTATTAAGACTACGGGATGAAATTACTGCTA GTGCCAGCTTACATTTGGTGCAATATGTTAGTGAAGTTAATCAAAGAGTCAATGCCGAATTAGATGGAATTTTAGATCAA ATTATTCCCACCTTGCAAAATATCTCCAAAAAAGATGGCTTGCTGAGGTTTATTGCTGCTGGCGATACTCAATCATCGGG TGCAGTTCCAGTTTGGTTACAAAATCTCTCGGAAATTGCCGATTTAGCAGTCAAATATCAGTAA
Upstream 100 bases:
>100_bases CGCCAAAGCAACTAATCAACAAGATGGCAAATAGGAAAGTGAAAAGATTTTTTTTGTGTTATAAAACTCACAGAAATTTA TCTTAGCGGAAAGCTGCTCT
Downstream 100 bases:
>100_bases TTAGTAATTAGTAGCCACCACTAATTACGACTGCATAGGGAACCGATCAAATGCCTGTAAAAATTCAGCTTGCACCACGC TTTCAGATGCGGGTTAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 847; Mature: 847
Protein sequence:
>847_residues MEPEKLGRFKEYGELILQKLDFVPQSPSQQEDWVPASLDDCLLRLREAAQKTVELATSPVKIGVMGEFSSGKTLLLGSLI GYADALPISENPTTGNVTAIHLIPHPGFTTTQVGNFTVEYLTREGVNECLRFMLGEANRRTIAAGLPAMQPAKLNSGKEI LSWCEASWKSSNNLELRYLLRELVLFIRAYGSYGEALCGGRYEIDPDSAREGLQLAEQPLAIQTLGFEDLPPAHIRLPSP PQKLATKLLQNSFPLIRRVDIDVKISREIWDITDASEFTLLDFPGLGAANSGARDTFLSLRELAEVQTILVLLNGKSPGS DRANKIFTMMQQQRPGQDLKDLILVGVGRFDQLPLESEGGERLLDQLIDESRTPHLTADKVLQQLRVLQTTIDGASAFTT NKDRIALLSPLLGLAELAKRSSTIKAGSPEFLANLDYPNYLERSKQLQQKWGYLSDRLIESDPRSHLSRKLGYFAQDGGI AKLRELMQNHVATHGLKQLYEDTSRAADNLRQQQDNLKGIIAEIHEQGIPTGDSQALIDLRTALENLDKTYRNFQKDLGK EPLKDRRGTVVSDVVKDELTFRVLSWNHWTLLFNKANNGTITITESKGAAGKLFDRGNRTNTSIPTKSDDFYPAFEKTVK EVEEFARDRIRQAVVDLLSKLSQQIAPERERLQALLNPEIEQEIESKFGGEEADLFYQLLLGSDPIQWQAAIISEINHQE KFLTPDIIFPLARQDEKHDIGQIFDWSPEKAQTLSKSSNHQMFVLRLRDEITASASLHLVQYVSEVNQRVNAELDGILDQ IIPTLQNISKKDGLLRFIAAGDTQSSGAVPVWLQNLSEIADLAVKYQ
Sequences:
>Translated_847_residues MEPEKLGRFKEYGELILQKLDFVPQSPSQQEDWVPASLDDCLLRLREAAQKTVELATSPVKIGVMGEFSSGKTLLLGSLI GYADALPISENPTTGNVTAIHLIPHPGFTTTQVGNFTVEYLTREGVNECLRFMLGEANRRTIAAGLPAMQPAKLNSGKEI LSWCEASWKSSNNLELRYLLRELVLFIRAYGSYGEALCGGRYEIDPDSAREGLQLAEQPLAIQTLGFEDLPPAHIRLPSP PQKLATKLLQNSFPLIRRVDIDVKISREIWDITDASEFTLLDFPGLGAANSGARDTFLSLRELAEVQTILVLLNGKSPGS DRANKIFTMMQQQRPGQDLKDLILVGVGRFDQLPLESEGGERLLDQLIDESRTPHLTADKVLQQLRVLQTTIDGASAFTT NKDRIALLSPLLGLAELAKRSSTIKAGSPEFLANLDYPNYLERSKQLQQKWGYLSDRLIESDPRSHLSRKLGYFAQDGGI AKLRELMQNHVATHGLKQLYEDTSRAADNLRQQQDNLKGIIAEIHEQGIPTGDSQALIDLRTALENLDKTYRNFQKDLGK EPLKDRRGTVVSDVVKDELTFRVLSWNHWTLLFNKANNGTITITESKGAAGKLFDRGNRTNTSIPTKSDDFYPAFEKTVK EVEEFARDRIRQAVVDLLSKLSQQIAPERERLQALLNPEIEQEIESKFGGEEADLFYQLLLGSDPIQWQAAIISEINHQE KFLTPDIIFPLARQDEKHDIGQIFDWSPEKAQTLSKSSNHQMFVLRLRDEITASASLHLVQYVSEVNQRVNAELDGILDQ IIPTLQNISKKDGLLRFIAAGDTQSSGAVPVWLQNLSEIADLAVKYQ >Mature_847_residues MEPEKLGRFKEYGELILQKLDFVPQSPSQQEDWVPASLDDCLLRLREAAQKTVELATSPVKIGVMGEFSSGKTLLLGSLI GYADALPISENPTTGNVTAIHLIPHPGFTTTQVGNFTVEYLTREGVNECLRFMLGEANRRTIAAGLPAMQPAKLNSGKEI LSWCEASWKSSNNLELRYLLRELVLFIRAYGSYGEALCGGRYEIDPDSAREGLQLAEQPLAIQTLGFEDLPPAHIRLPSP PQKLATKLLQNSFPLIRRVDIDVKISREIWDITDASEFTLLDFPGLGAANSGARDTFLSLRELAEVQTILVLLNGKSPGS DRANKIFTMMQQQRPGQDLKDLILVGVGRFDQLPLESEGGERLLDQLIDESRTPHLTADKVLQQLRVLQTTIDGASAFTT NKDRIALLSPLLGLAELAKRSSTIKAGSPEFLANLDYPNYLERSKQLQQKWGYLSDRLIESDPRSHLSRKLGYFAQDGGI AKLRELMQNHVATHGLKQLYEDTSRAADNLRQQQDNLKGIIAEIHEQGIPTGDSQALIDLRTALENLDKTYRNFQKDLGK EPLKDRRGTVVSDVVKDELTFRVLSWNHWTLLFNKANNGTITITESKGAAGKLFDRGNRTNTSIPTKSDDFYPAFEKTVK EVEEFARDRIRQAVVDLLSKLSQQIAPERERLQALLNPEIEQEIESKFGGEEADLFYQLLLGSDPIQWQAAIISEINHQE KFLTPDIIFPLARQDEKHDIGQIFDWSPEKAQTLSKSSNHQMFVLRLRDEITASASLHLVQYVSEVNQRVNAELDGILDQ IIPTLQNISKKDGLLRFIAAGDTQSSGAVPVWLQNLSEIADLAVKYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94726; Mature: 94726
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPEKLGRFKEYGELILQKLDFVPQSPSQQEDWVPASLDDCLLRLREAAQKTVELATSPV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE KIGVMGEFSSGKTLLLGSLIGYADALPISENPTTGNVTAIHLIPHPGFTTTQVGNFTVEY EEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHH LTREGVNECLRFMLGEANRRTIAAGLPAMQPAKLNSGKEILSWCEASWKSSNNLELRYLL HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH RELVLFIRAYGSYGEALCGGRYEIDPDSAREGLQLAEQPLAIQTLGFEDLPPAHIRLPSP HHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCEECCCC PQKLATKLLQNSFPLIRRVDIDVKISREIWDITDASEFTLLDFPGLGAANSGARDTFLSL HHHHHHHHHHCCCCCEEEECCCEEECCHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHH RELAEVQTILVLLNGKSPGSDRANKIFTMMQQQRPGQDLKDLILVGVGRFDQLPLESEGG HHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCH ERLLDQLIDESRTPHLTADKVLQQLRVLQTTIDGASAFTTNKDRIALLSPLLGLAELAKR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHH SSTIKAGSPEFLANLDYPNYLERSKQLQQKWGYLSDRLIESDPRSHLSRKLGYFAQDGGI CCCCCCCCCHHEEECCCHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHCCCCCCCCH AKLRELMQNHVATHGLKQLYEDTSRAADNLRQQQDNLKGIIAEIHEQGIPTGDSQALIDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH RTALENLDKTYRNFQKDLGKEPLKDRRGTVVSDVVKDELTFRVLSWNHWTLLFNKANNGT HHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHEEEEEEECEEEEEEEECCCCE ITITESKGAAGKLFDRGNRTNTSIPTKSDDFYPAFEKTVKEVEEFARDRIRQAVVDLLSK EEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQQIAPERERLQALLNPEIEQEIESKFGGEEADLFYQLLLGSDPIQWQAAIISEINHQE HHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHH KFLTPDIIFPLARQDEKHDIGQIFDWSPEKAQTLSKSSNHQMFVLRLRDEITASASLHLV HHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHH QYVSEVNQRVNAELDGILDQIIPTLQNISKKDGLLRFIAAGDTQSSGAVPVWLQNLSEIA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH DLAVKYQ HHHHCCC >Mature Secondary Structure MEPEKLGRFKEYGELILQKLDFVPQSPSQQEDWVPASLDDCLLRLREAAQKTVELATSPV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE KIGVMGEFSSGKTLLLGSLIGYADALPISENPTTGNVTAIHLIPHPGFTTTQVGNFTVEY EEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHH LTREGVNECLRFMLGEANRRTIAAGLPAMQPAKLNSGKEILSWCEASWKSSNNLELRYLL HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH RELVLFIRAYGSYGEALCGGRYEIDPDSAREGLQLAEQPLAIQTLGFEDLPPAHIRLPSP HHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCEECCCC PQKLATKLLQNSFPLIRRVDIDVKISREIWDITDASEFTLLDFPGLGAANSGARDTFLSL HHHHHHHHHHCCCCCEEEECCCEEECCHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHH RELAEVQTILVLLNGKSPGSDRANKIFTMMQQQRPGQDLKDLILVGVGRFDQLPLESEGG HHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCH ERLLDQLIDESRTPHLTADKVLQQLRVLQTTIDGASAFTTNKDRIALLSPLLGLAELAKR HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHH SSTIKAGSPEFLANLDYPNYLERSKQLQQKWGYLSDRLIESDPRSHLSRKLGYFAQDGGI CCCCCCCCCHHEEECCCHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHCCCCCCCCH AKLRELMQNHVATHGLKQLYEDTSRAADNLRQQQDNLKGIIAEIHEQGIPTGDSQALIDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH RTALENLDKTYRNFQKDLGKEPLKDRRGTVVSDVVKDELTFRVLSWNHWTLLFNKANNGT HHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHEEEEEEECEEEEEEEECCCCE ITITESKGAAGKLFDRGNRTNTSIPTKSDDFYPAFEKTVKEVEEFARDRIRQAVVDLLSK EEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQQIAPERERLQALLNPEIEQEIESKFGGEEADLFYQLLLGSDPIQWQAAIISEINHQE HHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHH KFLTPDIIFPLARQDEKHDIGQIFDWSPEKAQTLSKSSNHQMFVLRLRDEITASASLHLV HHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHH QYVSEVNQRVNAELDGILDQIIPTLQNISKKDGLLRFIAAGDTQSSGAVPVWLQNLSEIA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH DLAVKYQ HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA