| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228633
Identifier: 17228633
GI number: 17228633
Start: 1337443
End: 1338597
Strand: Direct
Name: 17228633
Synonym: alr1138
Alternate gene names: NA
Gene position: 1337443-1338597 (Clockwise)
Preceding gene: 17228632
Following gene: 17228634
Centisome position: 20.85
GC content: 42.51
Gene sequence:
>1155_bases ATGACCAAAAACTGGTCAAATGGAGGTATAGTTACCCACACCGGAGTAATGACAGACCGCGTATTAATTCTTGGAGGACG GGGGCGGATTGGTAGTAGTGTTGCTCAAGATATAGCCACCCATACCCAAGCCCAAATTACAATCACCGGACGTTCCCCAG CGTCAGAAAAGGATATTACCTTACCGTCGGGGGGAAGAATGCAGTTTTTGGTGCTAGACTTGGCAGAAGTTGACAAGTTG CGAGAGGCGATCGCCCAATCTGATTTAGTTATCCACTGTGCCGGGCCATTTCACTACCGAGATGCCAATGTGTTGAAAAT ATGTATTGAACAAAGGGTTAACTATTTAGATATTAGTGACCACCGTTCTTTTACTAGTAAGGCTCTCAAGTATCACGAGG AAGCCGTGGCTGCGGGTGTCACAGCAATTGTGAATACCGGCATTTTTCCGGGAATTTCTAACAGCATGGTGCGTCATGAT GTAGAACAATTTGATGACCCAGAAAAGATACATTTAAGTTATCTGGTATCTGGCTCTGGTGGTGCTGGCATTACAGTCAT GCGGACTACTTTTTTAGGATTGCAGTATCCTTTTGAAGCTTGGTTAGAGGGAAAATGGCAGATAGTTCAACCCTATAGCG AAAGAGAAGTAGTTAAATTCCCTCCTCCCTACAATAACAGTGGAGTTTATTGGTTTGATATGCCAGAAACTTTTACACTA CCTGAAGCTTTCCCCAGTGTAAAAACAGTTATTACTAAGTTTGGCTCAGTTCCCGATTTTTATAATCATTTAACTTGGAT TGCTGCTCACATTTTTCCTAAATGGTTGATGCAGCGCCGTAGCATGATTGAATTCTTGTCTCATGTTAGCCATTTCATGA CAGATGTCACTAATAATTTTAGTGGTATCGGTGTGTCAGTCCGTTCAGAAGTAACGGGGATAAAAAATGGTAAGCAAGCT GTTTATTGCTCAACTTTAGTGCATGAAAATACAGCCGTTGCTTCTGGTTGTGGCACAGGCAGTATGGCACAATTTTTACT AGCAGGTAAGCTGGAAAAACCAGGGGTTTGGCCTGTGGAAGAAGCACTATCAACGGATTTATTTTTAGAAGCTATGGCAA ACCGAGGCATGAATCTTAACCATAATTGGTTATGA
Upstream 100 bases:
>100_bases GGTCAAATAGCGGTTTTTCCAAAGCCATTTGAAGTTTTCCCCACCTTTCTCAATCCCTATCCCCATCAGTACGTAAGTCA TACTTGCAACTGATGCCAAG
Downstream 100 bases:
>100_bases AAAAAATCAAAATCTCAAGCACTATGATCTGCCAATAGGGTGGGCAATGCCCACCATGCCATTAAGCATAGTTCACCCTA AATATGAGCCTCAATTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Saccharopine Dehydrogenase Related Protein
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTKNWSNGGIVTHTGVMTDRVLILGGRGRIGSSVAQDIATHTQAQITITGRSPASEKDITLPSGGRMQFLVLDLAEVDKL REAIAQSDLVIHCAGPFHYRDANVLKICIEQRVNYLDISDHRSFTSKALKYHEEAVAAGVTAIVNTGIFPGISNSMVRHD VEQFDDPEKIHLSYLVSGSGGAGITVMRTTFLGLQYPFEAWLEGKWQIVQPYSEREVVKFPPPYNNSGVYWFDMPETFTL PEAFPSVKTVITKFGSVPDFYNHLTWIAAHIFPKWLMQRRSMIEFLSHVSHFMTDVTNNFSGIGVSVRSEVTGIKNGKQA VYCSTLVHENTAVASGCGTGSMAQFLLAGKLEKPGVWPVEEALSTDLFLEAMANRGMNLNHNWL
Sequences:
>Translated_384_residues MTKNWSNGGIVTHTGVMTDRVLILGGRGRIGSSVAQDIATHTQAQITITGRSPASEKDITLPSGGRMQFLVLDLAEVDKL REAIAQSDLVIHCAGPFHYRDANVLKICIEQRVNYLDISDHRSFTSKALKYHEEAVAAGVTAIVNTGIFPGISNSMVRHD VEQFDDPEKIHLSYLVSGSGGAGITVMRTTFLGLQYPFEAWLEGKWQIVQPYSEREVVKFPPPYNNSGVYWFDMPETFTL PEAFPSVKTVITKFGSVPDFYNHLTWIAAHIFPKWLMQRRSMIEFLSHVSHFMTDVTNNFSGIGVSVRSEVTGIKNGKQA VYCSTLVHENTAVASGCGTGSMAQFLLAGKLEKPGVWPVEEALSTDLFLEAMANRGMNLNHNWL >Mature_383_residues TKNWSNGGIVTHTGVMTDRVLILGGRGRIGSSVAQDIATHTQAQITITGRSPASEKDITLPSGGRMQFLVLDLAEVDKLR EAIAQSDLVIHCAGPFHYRDANVLKICIEQRVNYLDISDHRSFTSKALKYHEEAVAAGVTAIVNTGIFPGISNSMVRHDV EQFDDPEKIHLSYLVSGSGGAGITVMRTTFLGLQYPFEAWLEGKWQIVQPYSEREVVKFPPPYNNSGVYWFDMPETFTLP EAFPSVKTVITKFGSVPDFYNHLTWIAAHIFPKWLMQRRSMIEFLSHVSHFMTDVTNNFSGIGVSVRSEVTGIKNGKQAV YCSTLVHENTAVASGCGTGSMAQFLLAGKLEKPGVWPVEEALSTDLFLEAMANRGMNLNHNWL
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42471; Mature: 42340
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNWSNGGIVTHTGVMTDRVLILGGRGRIGSSVAQDIATHTQAQITITGRSPASEKDIT CCCCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCEE LPSGGRMQFLVLDLAEVDKLREAIAQSDLVIHCAGPFHYRDANVLKICIEQRVNYLDISD CCCCCCEEEEEEEHHHHHHHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHCCCEEECCC HRSFTSKALKYHEEAVAAGVTAIVNTGIFPGISNSMVRHDVEQFDDPEKIHLSYLVSGSG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCC GAGITVMRTTFLGLQYPFEAWLEGKWQIVQPYSEREVVKFPPPYNNSGVYWFDMPETFTL CCCEEEEEHHHHCCCCCHHHHCCCCEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCCC PEAFPSVKTVITKFGSVPDFYNHLTWIAAHIFPKWLMQRRSMIEFLSHVSHFMTDVTNNF CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SGIGVSVRSEVTGIKNGKQAVYCSTLVHENTAVASGCGTGSMAQFLLAGKLEKPGVWPVE CCCEEEHHHHHCCCCCCCCEEEEEHHHHCCCCEECCCCCHHHHHHHHHCCCCCCCCCCHH EALSTDLFLEAMANRGMNLNHNWL HHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TKNWSNGGIVTHTGVMTDRVLILGGRGRIGSSVAQDIATHTQAQITITGRSPASEKDIT CCCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCEE LPSGGRMQFLVLDLAEVDKLREAIAQSDLVIHCAGPFHYRDANVLKICIEQRVNYLDISD CCCCCCEEEEEEEHHHHHHHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHCCCEEECCC HRSFTSKALKYHEEAVAAGVTAIVNTGIFPGISNSMVRHDVEQFDDPEKIHLSYLVSGSG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCC GAGITVMRTTFLGLQYPFEAWLEGKWQIVQPYSEREVVKFPPPYNNSGVYWFDMPETFTL CCCEEEEEHHHHCCCCCHHHHCCCCEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCCC PEAFPSVKTVITKFGSVPDFYNHLTWIAAHIFPKWLMQRRSMIEFLSHVSHFMTDVTNNF CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SGIGVSVRSEVTGIKNGKQAVYCSTLVHENTAVASGCGTGSMAQFLLAGKLEKPGVWPVE CCCEEEHHHHHCCCCCCCCEEEEEHHHHCCCCEECCCCCHHHHHHHHHCCCCCCCCCCHH EALSTDLFLEAMANRGMNLNHNWL HHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA