| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228624
Identifier: 17228624
GI number: 17228624
Start: 1328902
End: 1329879
Strand: Direct
Name: 17228624
Synonym: alr1129
Alternate gene names: NA
Gene position: 1328902-1329879 (Clockwise)
Preceding gene: 17228623
Following gene: 17228626
Centisome position: 20.72
GC content: 47.14
Gene sequence:
>978_bases ATGACCTCTGAACAAATAATTAGGCGTTCCGACATATTAAATACGCAGGTAATTACCCGCGACAACGGCAAACGGTTAGG AATCGTCAGTCAAGTTTGGGTGGATATTGATCAAAGAGAGGTTGTGGCTCTTGGTTTGCGAGACAGCCTGATCTCTATCT CTGGTCTGCCCCGCTATATGTACCTTAGCAGCATCCACCAATATGGCGATGTCATCTTAGTTGATAACGAAGATGTCATC GAAGATATTGAAGTTGAAGCCCTCAGTAACTTGATTAACTGGGAAGTAATCACCGAAACAGGCGAAGTTTTAGGTAGAGT GCGGGGTTTCCGATTTGAAGCCGAAACAGGTAAACTCAACACCATAGTCATCGCCTCCTTGGGAGTTCCCCAAATTCCCG ACCAGTTTTTAAGCACCTACGAAATATCCATAGAAGAAGTAGTCAGCACCGGCCCCAACAGGTTGATTGTCTTTGAAGGA GCCGAAGAACGGGTAAATCAGTTAACAGTCGGTGTTCTCGAACGCCTGGGTATTGGTAAAGCACCTTGGGAACGGGATAC AGAAGAAGAATATGGTTATTCCGCACCCCGCGCTGTCGCACCATCAAATCAGCTACCTAGCGGCGTACCCTTACAGCCAC CCAAACCCAAAGTCCGCACCCCCGAACCCGTAGCCGAGGAAGAATGGACTGAAGATTACATCGAAGAAGAAAGACCACAG CGCCAAGTCATGAAGGCGCGACAATACGAGTCAATTCAATACGAAGAAGACGAAGAAGACAACTGGAGTGAAGCCACGGG TAGAGACAGATATCAGCCCCCGTCTCAACCCTACAGCAAACCATACACCGAAGATTACGACGATTATGATGACGATGTAG AAAGTGATGCGTGGGAAGACGTACCACCCCAACCAGTAAATATTCCCAAGAAAGTCAAAGAAAGACAACCAGAATACGAA GAAGAAGGCGGATATTAA
Upstream 100 bases:
>100_bases GTTTTGGGAATTAAGTTATCATCCTCGAATACATCTGCTTGAGTTTTTGTTAATAATAGTGTATAGATAAACCGGATTCG AGATCAGGACTCCGTATAGA
Downstream 100 bases:
>100_bases TTTTTTGGTGATTCATGATTAAACCTCTCCTATTTGTTTGTAGGAGAGGTTTAATTTTTTGCTTAAGGATTAATAGCAGA ATTAGCCATTTTGATGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTSEQIIRRSDILNTQVITRDNGKRLGIVSQVWVDIDQREVVALGLRDSLISISGLPRYMYLSSIHQYGDVILVDNEDVI EDIEVEALSNLINWEVITETGEVLGRVRGFRFEAETGKLNTIVIASLGVPQIPDQFLSTYEISIEEVVSTGPNRLIVFEG AEERVNQLTVGVLERLGIGKAPWERDTEEEYGYSAPRAVAPSNQLPSGVPLQPPKPKVRTPEPVAEEEWTEDYIEEERPQ RQVMKARQYESIQYEEDEEDNWSEATGRDRYQPPSQPYSKPYTEDYDDYDDDVESDAWEDVPPQPVNIPKKVKERQPEYE EEGGY
Sequences:
>Translated_325_residues MTSEQIIRRSDILNTQVITRDNGKRLGIVSQVWVDIDQREVVALGLRDSLISISGLPRYMYLSSIHQYGDVILVDNEDVI EDIEVEALSNLINWEVITETGEVLGRVRGFRFEAETGKLNTIVIASLGVPQIPDQFLSTYEISIEEVVSTGPNRLIVFEG AEERVNQLTVGVLERLGIGKAPWERDTEEEYGYSAPRAVAPSNQLPSGVPLQPPKPKVRTPEPVAEEEWTEDYIEEERPQ RQVMKARQYESIQYEEDEEDNWSEATGRDRYQPPSQPYSKPYTEDYDDYDDDVESDAWEDVPPQPVNIPKKVKERQPEYE EEGGY >Mature_324_residues TSEQIIRRSDILNTQVITRDNGKRLGIVSQVWVDIDQREVVALGLRDSLISISGLPRYMYLSSIHQYGDVILVDNEDVIE DIEVEALSNLINWEVITETGEVLGRVRGFRFEAETGKLNTIVIASLGVPQIPDQFLSTYEISIEEVVSTGPNRLIVFEGA EERVNQLTVGVLERLGIGKAPWERDTEEEYGYSAPRAVAPSNQLPSGVPLQPPKPKVRTPEPVAEEEWTEDYIEEERPQR QVMKARQYESIQYEEDEEDNWSEATGRDRYQPPSQPYSKPYTEDYDDYDDDVESDAWEDVPPQPVNIPKKVKERQPEYEE EGGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37167; Mature: 37036
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEQIIRRSDILNTQVITRDNGKRLGIVSQVWVDIDQREVVALGLRDSLISISGLPRYM CCHHHHHHHHHHCCCEEEECCCCCEECHHHHHHHCCCCCEEEEECHHHHHHHHCCCCHHH YLSSIHQYGDVILVDNEDVIEDIEVEALSNLINWEVITETGEVLGRVRGFRFEAETGKLN HHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHCCEEECCCCCEE TIVIASLGVPQIPDQFLSTYEISIEEVVSTGPNRLIVFEGAEERVNQLTVGVLERLGIGK EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC APWERDTEEEYGYSAPRAVAPSNQLPSGVPLQPPKPKVRTPEPVAEEEWTEDYIEEERPQ CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH RQVMKARQYESIQYEEDEEDNWSEATGRDRYQPPSQPYSKPYTEDYDDYDDDVESDAWED HHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPPQPVNIPKKVKERQPEYEEEGGY CCCCCCCCCHHHHHCCCCCHHCCCC >Mature Secondary Structure TSEQIIRRSDILNTQVITRDNGKRLGIVSQVWVDIDQREVVALGLRDSLISISGLPRYM CHHHHHHHHHHCCCEEEECCCCCEECHHHHHHHCCCCCEEEEECHHHHHHHHCCCCHHH YLSSIHQYGDVILVDNEDVIEDIEVEALSNLINWEVITETGEVLGRVRGFRFEAETGKLN HHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHCCEEECCCCCEE TIVIASLGVPQIPDQFLSTYEISIEEVVSTGPNRLIVFEGAEERVNQLTVGVLERLGIGK EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC APWERDTEEEYGYSAPRAVAPSNQLPSGVPLQPPKPKVRTPEPVAEEEWTEDYIEEERPQ CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHH RQVMKARQYESIQYEEDEEDNWSEATGRDRYQPPSQPYSKPYTEDYDDYDDDVESDAWED HHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPPQPVNIPKKVKERQPEYEEEGGY CCCCCCCCCHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA