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The map label for this gene is 17228481

Identifier: 17228481

GI number: 17228481

Start: 1152761

End: 1153729

Strand: Direct

Name: 17228481

Synonym: alr0986

Alternate gene names: NA

Gene position: 1152761-1153729 (Clockwise)

Preceding gene: 17228476

Following gene: 17228482

Centisome position: 17.97

GC content: 43.55

Gene sequence:

>969_bases
ATGGATGTCAGCTTGATCATGTCAAACATCCTGAATCCGCCAGTACTCTTTTTCTTTCTGGGAATGCTTGCTGTTTTTGT
CAAGTCGGATCTGGAAATTCCTGCGCCTATACCTAAAGCCTTATCGCTTTATTTGCTATTCGCCATAGGTTTTAAAGGAG
GAGTAGAACTAATTAAAAGTGGGGTGACTCAGGAAGTGGTCTTCACGCTTCTGGCGGCGATGTTAATGGCCTGCTTTGTT
CCCATTTACACGTTCTTTATTTTAAAACTGAAACTGGATACTTACGATGCGGCGGCGATCGCTGCCACTTACGGATCTAT
AAGTGCTGTTACCTTCATCACCGCCAGCACCTTTTTAAGTGAGTTGGGGATTGCTTTTGATGGTTACATGGTCGCAGCCC
TCGCCCTGATGGAATCTCCAGCCATTATTGTTGGTCTGATCTTGGTCAATCTCTTCACCGTTGATGAAAAGCGAGAATTT
GCCTGGTCAGAGGTTTTACAAGAAGCATTTTTGAATAGTTCCGTCTTTTTGTTAGTTGGTAGCCTCTTCATTGGCTTCTT
AACAGGAGAACATGGTTGGCAAGTCTTAGAACCCTTTACACAAGGGCTATTTTACGGCGCTCTCACCTTCTTTCTCTTAG
ATATGGGATTAGTGGCAGCCAGAAGAATTAAAGACTTGCAAAAAACAGGATTTTTCCTGATTTTATTTGCCATACTAATT
CCAATACTCAATGCAGGCATTGGCTTACTAATTGCCAAATTCATTGGTATGCCGGCGGGCGATTCTCTATTATTTGCTGT
GTTGTCCGCTAGTGCTTCTTACATCGCCGTCCCAGCAGCTATGCGGTTAACTGTTCCAGAAGCCAACCCCAGTCTGTATG
TTTCTACCGCTTTGGCCGTGACATTTCCGTTCAACATTATTGTGGGCATCCCATTATACCAATACGGAATTAACCTATTT
TGGAGGTAA

Upstream 100 bases:

>100_bases
TCAGGTAACGATACACGCTACATCATGAGTCAAACATGAAAATTTCAAAGATGAAAAATTTCTTGAATTACCGACTTCAT
CAGTATGTGGAGGGGGGGAA

Downstream 100 bases:

>100_bases
TAATATGCAGCTAGTTAAAAAGATAGAAATTATTGCCAATGCCTTTGAATTGAGCAAAATCTTAGAAAGTTTAGACAAAT
CTGGAGTGCATGGTCATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; SBT Type Permease Sodium-Bicarbonate; Membrane Permease; Conserved Domain Protein; Permease-Like Protein; Domain Transmembrane Protein

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MDVSLIMSNILNPPVLFFFLGMLAVFVKSDLEIPAPIPKALSLYLLFAIGFKGGVELIKSGVTQEVVFTLLAAMLMACFV
PIYTFFILKLKLDTYDAAAIAATYGSISAVTFITASTFLSELGIAFDGYMVAALALMESPAIIVGLILVNLFTVDEKREF
AWSEVLQEAFLNSSVFLLVGSLFIGFLTGEHGWQVLEPFTQGLFYGALTFFLLDMGLVAARRIKDLQKTGFFLILFAILI
PILNAGIGLLIAKFIGMPAGDSLLFAVLSASASYIAVPAAMRLTVPEANPSLYVSTALAVTFPFNIIVGIPLYQYGINLF
WR

Sequences:

>Translated_322_residues
MDVSLIMSNILNPPVLFFFLGMLAVFVKSDLEIPAPIPKALSLYLLFAIGFKGGVELIKSGVTQEVVFTLLAAMLMACFV
PIYTFFILKLKLDTYDAAAIAATYGSISAVTFITASTFLSELGIAFDGYMVAALALMESPAIIVGLILVNLFTVDEKREF
AWSEVLQEAFLNSSVFLLVGSLFIGFLTGEHGWQVLEPFTQGLFYGALTFFLLDMGLVAARRIKDLQKTGFFLILFAILI
PILNAGIGLLIAKFIGMPAGDSLLFAVLSASASYIAVPAAMRLTVPEANPSLYVSTALAVTFPFNIIVGIPLYQYGINLF
WR
>Mature_322_residues
MDVSLIMSNILNPPVLFFFLGMLAVFVKSDLEIPAPIPKALSLYLLFAIGFKGGVELIKSGVTQEVVFTLLAAMLMACFV
PIYTFFILKLKLDTYDAAAIAATYGSISAVTFITASTFLSELGIAFDGYMVAALALMESPAIIVGLILVNLFTVDEKREF
AWSEVLQEAFLNSSVFLLVGSLFIGFLTGEHGWQVLEPFTQGLFYGALTFFLLDMGLVAARRIKDLQKTGFFLILFAILI
PILNAGIGLLIAKFIGMPAGDSLLFAVLSASASYIAVPAAMRLTVPEANPSLYVSTALAVTFPFNIIVGIPLYQYGINLF
WR

Specific function: Unknown

COG id: COG3329

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34942; Mature: 34942

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSLIMSNILNPPVLFFFLGMLAVFVKSDLEIPAPIPKALSLYLLFAIGFKGGVELIKS
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHC
GVTQEVVFTLLAAMLMACFVPIYTFFILKLKLDTYDAAAIAATYGSISAVTFITASTFLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCHHHHHHHHHHHHHH
ELGIAFDGYMVAALALMESPAIIVGLILVNLFTVDEKREFAWSEVLQEAFLNSSVFLLVG
HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHH
SLFIGFLTGEHGWQVLEPFTQGLFYGALTFFLLDMGLVAARRIKDLQKTGFFLILFAILI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
PILNAGIGLLIAKFIGMPAGDSLLFAVLSASASYIAVPAAMRLTVPEANPSLYVSTALAV
HHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCEEEEECCCCCCCEEEEHHHHH
TFPFNIIVGIPLYQYGINLFWR
HCCHHHHCCCHHHHHCCHHCCC
>Mature Secondary Structure
MDVSLIMSNILNPPVLFFFLGMLAVFVKSDLEIPAPIPKALSLYLLFAIGFKGGVELIKS
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHC
GVTQEVVFTLLAAMLMACFVPIYTFFILKLKLDTYDAAAIAATYGSISAVTFITASTFLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCHHHHHHHHHHHHHH
ELGIAFDGYMVAALALMESPAIIVGLILVNLFTVDEKREFAWSEVLQEAFLNSSVFLLVG
HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHH
SLFIGFLTGEHGWQVLEPFTQGLFYGALTFFLLDMGLVAARRIKDLQKTGFFLILFAILI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
PILNAGIGLLIAKFIGMPAGDSLLFAVLSASASYIAVPAAMRLTVPEANPSLYVSTALAV
HHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECCEEEEECCCCCCCEEEEHHHHH
TFPFNIIVGIPLYQYGINLFWR
HCCHHHHCCCHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA