| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228377
Identifier: 17228377
GI number: 17228377
Start: 1018047
End: 1018898
Strand: Direct
Name: 17228377
Synonym: alr0882
Alternate gene names: NA
Gene position: 1018047-1018898 (Clockwise)
Preceding gene: 17228375
Following gene: 17228385
Centisome position: 15.87
GC content: 41.9
Gene sequence:
>852_bases ATGATAGAAAAGATTTTGCTAGCTGTTTCTGGATTGGGACACGCAGAAGAAATGCTCAAAACTTTGAAAGAAGTGCCATC AATCCAATCTGCAAAAGTTACAGTCCTGCACGTAGTTCCTTCTCAAGCAACATCTTCTGCCATGACAGATAAATGGGAAG AAGGTGGCAAAATTCTGGCTAATGCAATTCAGGCTTTGAACTTAGATCCTAGCCAGGTTTCTTCGATTTTACGCCAAGGA GATCCTAAAGATGTTGTTTGTCAGGTTGCCGATGAAATTGACGCTGACTTAATTATTATGGGTTCACGCGGACTTAAGCG TCTGCAATCGATTTTATCAAACTCAGTTAGTCAGTATGTCTTTCAATTGTCTTCTCGCCCAATGTTGCTGGTTAAAGACG ACATTTATGTCAAAAGAATTAAGCGCGTAATGGTAGCGATGGATAATTCTGACGCAGCAAAACATTGCTTAAATCTAGCT TTGTTCTTGTTGCGGGGTATTGTCGGTAGTCAATTAATTCTGGCTAATGTGACAACCGATTTGCGTGGTAAAACCTCAGA AGTCTCGGAAATTAGCCCAGACAAAAATCCTGTTCTAGCTTCAGCCGTAGCAGAAGCACAAAGATATGGTATTCAAACTC GTTGCTTTACCAGTAGTGGCAAACCAGGAGAAGAAATCTGTCGTCTAGCAGACGAGTTGAACGTAGATTTATTATTACTC GGATCACCCGATCGCCGTCCATCCGTGGCTAAGAATTTTGTCGATATAGACAGACTCATCGGCGCTTCACTGTCAGACTA TGTGCGAGTTAATGCTAGCTGTCCTGTATTATTAGCGAGGACAACTGGTTAA
Upstream 100 bases:
>100_bases TGCTAACTTAACTACTAAGTTGTTGAGCCAGGTGGTGAACATTTCATCCGAACCAAGAAGAAAAATTAAACACCAAGCAA CCTTAAAACAAGAACTAACA
Downstream 100 bases:
>100_bases CTAGGGGTGTAGGGGTGTGGTGAAGTAATTTACCTTCCCGTATGCTGATTTAGTTTTCAAGTCTTTCCCTTACACCCCTA CCCCCTTATACCCTTATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; UspA Domain-Containing Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MIEKILLAVSGLGHAEEMLKTLKEVPSIQSAKVTVLHVVPSQATSSAMTDKWEEGGKILANAIQALNLDPSQVSSILRQG DPKDVVCQVADEIDADLIIMGSRGLKRLQSILSNSVSQYVFQLSSRPMLLVKDDIYVKRIKRVMVAMDNSDAAKHCLNLA LFLLRGIVGSQLILANVTTDLRGKTSEVSEISPDKNPVLASAVAEAQRYGIQTRCFTSSGKPGEEICRLADELNVDLLLL GSPDRRPSVAKNFVDIDRLIGASLSDYVRVNASCPVLLARTTG
Sequences:
>Translated_283_residues MIEKILLAVSGLGHAEEMLKTLKEVPSIQSAKVTVLHVVPSQATSSAMTDKWEEGGKILANAIQALNLDPSQVSSILRQG DPKDVVCQVADEIDADLIIMGSRGLKRLQSILSNSVSQYVFQLSSRPMLLVKDDIYVKRIKRVMVAMDNSDAAKHCLNLA LFLLRGIVGSQLILANVTTDLRGKTSEVSEISPDKNPVLASAVAEAQRYGIQTRCFTSSGKPGEEICRLADELNVDLLLL GSPDRRPSVAKNFVDIDRLIGASLSDYVRVNASCPVLLARTTG >Mature_283_residues MIEKILLAVSGLGHAEEMLKTLKEVPSIQSAKVTVLHVVPSQATSSAMTDKWEEGGKILANAIQALNLDPSQVSSILRQG DPKDVVCQVADEIDADLIIMGSRGLKRLQSILSNSVSQYVFQLSSRPMLLVKDDIYVKRIKRVMVAMDNSDAAKHCLNLA LFLLRGIVGSQLILANVTTDLRGKTSEVSEISPDKNPVLASAVAEAQRYGIQTRCFTSSGKPGEEICRLADELNVDLLLL GSPDRRPSVAKNFVDIDRLIGASLSDYVRVNASCPVLLARTTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30610; Mature: 30610
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKILLAVSGLGHAEEMLKTLKEVPSIQSAKVTVLHVVPSQATSSAMTDKWEEGGKILA CHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCHHHHH NAIQALNLDPSQVSSILRQGDPKDVVCQVADEIDADLIIMGSRGLKRLQSILSNSVSQYV HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH FQLSSRPMLLVKDDIYVKRIKRVMVAMDNSDAAKHCLNLALFLLRGIVGSQLILANVTTD HHHCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCC LRGKTSEVSEISPDKNPVLASAVAEAQRYGIQTRCFTSSGKPGEEICRLADELNVDLLLL CCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCEEEEEE GSPDRRPSVAKNFVDIDRLIGASLSDYVRVNASCPVLLARTTG CCCCCCCHHHHHHHHHHHHHCCCHHHHEEECCCCCEEEEECCC >Mature Secondary Structure MIEKILLAVSGLGHAEEMLKTLKEVPSIQSAKVTVLHVVPSQATSSAMTDKWEEGGKILA CHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCHHHHH NAIQALNLDPSQVSSILRQGDPKDVVCQVADEIDADLIIMGSRGLKRLQSILSNSVSQYV HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH FQLSSRPMLLVKDDIYVKRIKRVMVAMDNSDAAKHCLNLALFLLRGIVGSQLILANVTTD HHHCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCC LRGKTSEVSEISPDKNPVLASAVAEAQRYGIQTRCFTSSGKPGEEICRLADELNVDLLLL CCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCEEEEEE GSPDRRPSVAKNFVDIDRLIGASLSDYVRVNASCPVLLARTTG CCCCCCCHHHHHHHHHHHHHCCCHHHHEEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA